LOC120574186


Basic Information

Item Value
gene id LOC120574186
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 29171995 ~ 29198622 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824402.1
ccggaggataatcagttgagatcgtgtgtgtgcgtccttgagaactCAGCTAAAAGTAGAGCCTGAAGAAGAGAACATGAGTGCTGAGATTACCAGAACACTACAGAGggctgctgttgtgtgtgtgatcatcCTGCCGATGTTATATTTGGTGATAGTCTATTACCGTCCCGGAGAGCTAAGACAAGAGGTTCCTACCACACAAAAGAGCCGCCCCCTCCCCCACAATTCCAGCTTGTCACTCCAGAGTCATCTTCCCCCACCTGGTCCATGCACCTGTCCAGGCGGCTCAGTGCTGCTCAAAGATCACATCCCCAAGGATCAGTATGAGAAGGTGGCCAAACGCCGAGCTAAGGAGCTCCAACAACACAAAGCCAGgACTACATCTGTATTATCGAAACTGCTGATTGCTTTGCCAAACTCTCCTCTGCAGTATCCTATCCAGGGTTTTACAGTACGACCCTTGACCACCACTCCCATACCAGGTTTAGCACTGCATGCGGAACAAAGAAGCAGCTACAAGGTGTCCTTGAATGTGTCCAAAGGGGTCCTGACTACGGAGAATCTAGCTGAAGGTGTGAAGGTCCAAGgtGGTGGTGGGACCAGACTGATTATGGAATCTAGCAGCCTGGTGATCCTCAACGATGCACTGACTAAAGTGATCTACACCAGTACTGTCTACCATATACACACTGGAGACCTCGCATCCTTCCAGTTTGAAAACCATGAAGCTGTGTTTCCCATTACCATCAAACAGCCTCAGCTGCCAGTGCTGCACGACATGGGGACAGATATCAACTCTCACGTCACCATCGCCACAAAGACATTTCTGCGCTACCCACAACTCAAGGTGTTGTTGAGTAGCATCCGGCGTTTCTATAGCAACATAGAAGTCGTCATTGCAGATGACAGCTTTGAACCAGAGCACATTACCGGAGAGCACATCCGGCAGTACTTCATGCCTCCAGCACAggGCTGGTTTGCTGGCAGGAATCTGGCCGTCTCCCAGGTAACCACCAAGTACTTCCTGTGGGTGGACGATGACTTTTTGTTCACGGAGAACACAAAGATAGAGAAGCTGGTGGAGGTGATGGAGGCGGTCCCAGAACTGGACTTGCTAGGTGGGACAGTACAAGGGAACcagttttatttctctcttctctatgaggaaggagaggaaatgGAAGGTGGCTGCCTGTACAGGAAGTCTCAACGGAAGTTCCAATCACTTCCTGGTTACCCACAATGCTTTCTGGCCAATGGGGTGGTCAACTTCTTCCTGGCTCGCACAGATGCCATCCAGAGGGTGGGATTTGACCCTAAGCTCCAAAGGGTAGCACACTCAGAGTTCTTTATGGATGGCCTGGGCTCGTTGCTGGTCGCCACGTGTGACCATGTGTCCATTGACCATCAGCCCAAAACAGGCAAAGGCAAGGACAATGCTCACTACGCTCGTTTTAGAAACCCTGGAAAGAGTGACATGGAGTTCAAACTGCAGCTTCACTTTTTCAAAAACCACCTAAAGTGTATCAAATATGGATAGACGACTACAAGAGGACATTGTGTTACATATTTCCCTGCAGTTATTCAAATAAATAGTTCTGATTCTGGGTGGCAAAACCAGGTCTGAAAAGTC
>XM_039824403.1
ccggaggataatcagttgagatcgtgtgtgtgcgtccttgagaactCAGCTAAAAGTAGAGCCTGAAGAAGAGAACATGAGTGCTGAGATTACCAGAACACTACAGAGggctgctgttgtgtgtgtgatcatcCTGCCGATGTTATATTTGGTGATAGTCTATTACCGTCCCGGAGAGCTAAGACAAGAGGTTCCTACCACACAAAAGAGCTTGTCACTCCAGAGTCATCTTCCCCCACCTGGTCCATGCACCTGTCCAGGCGGCTCAGTGCTGCTCAAAGATCACATCCCCAAGGATCAGTATGAGAAGGTGGCCAAACGCCGAGCTAAGGAGCTCCAACAACACAAAGCCAGgACTACATCTGTATTATCGAAACTGCTGATTGCTTTGCCAAACTCTCCTCTGCAGTATCCTATCCAGGGTTTTACAGTACGACCCTTGACCACCACTCCCATACCAGGTTTAGCACTGCATGCGGAACAAAGAAGCAGCTACAAGGTGTCCTTGAATGTGTCCAAAGGGGTCCTGACTACGGAGAATCTAGCTGAAGGTGTGAAGGTCCAAGgtGGTGGTGGGACCAGACTGATTATGGAATCTAGCAGCCTGGTGATCCTCAACGATGCACTGACTAAAGTGATCTACACCAGTACTGTCTACCATATACACACTGGAGACCTCGCATCCTTCCAGTTTGAAAACCATGAAGCTGTGTTTCCCATTACCATCAAACAGCCTCAGCTGCCAGTGCTGCACGACATGGGGACAGATATCAACTCTCACGTCACCATCGCCACAAAGACATTTCTGCGCTACCCACAACTCAAGGTGTTGTTGAGTAGCATCCGGCGTTTCTATAGCAACATAGAAGTCGTCATTGCAGATGACAGCTTTGAACCAGAGCACATTACCGGAGAGCACATCCGGCAGTACTTCATGCCTCCAGCACAggGCTGGTTTGCTGGCAGGAATCTGGCCGTCTCCCAGGTAACCACCAAGTACTTCCTGTGGGTGGACGATGACTTTTTGTTCACGGAGAACACAAAGATAGAGAAGCTGGTGGAGGTGATGGAGGCGGTCCCAGAACTGGACTTGCTAGGTGGGACAGTACAAGGGAACcagttttatttctctcttctctatgaggaaggagaggaaatgGAAGGTGGCTGCCTGTACAGGAAGTCTCAACGGAAGTTCCAATCACTTCCTGGTTACCCACAATGCTTTCTGGCCAATGGGGTGGTCAACTTCTTCCTGGCTCGCACAGATGCCATCCAGAGGGTGGGATTTGACCCTAAGCTCCAAAGGGTAGCACACTCAGAGTTCTTTATGGATGGCCTGGGCTCGTTGCTGGTCGCCACGTGTGACCATGTGTCCATTGACCATCAGCCCAAAACAGGCAAAGGCAAGGACAATGCTCACTACGCTCGTTTTAGAAACCCTGGAAAGAGTGACATGGAGTTCAAACTGCAGCTTCACTTTTTCAAAAACCACCTAAAGTGTATCAAATATGGATAGACGACTACAAGAGGACATTGTGTTACATATTTCCCTGCAGTTATTCAAATAAATAGTTCTGATTCTGGGTGGCAAAACCAGGTCTGAAAAGTC
>XM_039824404.1
ggtaaccggctccaactagcctactgctcccaataagtgacaaaataacgccaacattgtCCTTTTCCTTCCATACTTGGTAGTTAACACTGAAGATAAAGTGTGCCTGATCAGTTAGGAGaagattcccccccccccctttctctttGGACCATCTTGATAGGTAGTGGTGGTTGAGCATCTCTGGGACTGAACTGCAGTGTTGCGCTGGACTGGCTTTATCCTCTGCAGAGCCAGATCCACTGTCAGCATAGTAGTGCCTCTGTAAAATTCAAGTAGAAAGAACAAAAACCAAATAACTGATGGGTCACAGCAAGAGAAGAGACATTCAGAATAACCTCCCTTCGTAAATGTAATATAAGCAATTCATTAACAAACTTGCATAATCCATATTTTGAGTAGGATCACTGAGGTAGGAAAATAGTGACAATGCTAAGAGCGATACTGCTCCCAATGGAGCAGCAGAATAggagtctgatgctgctccgCTGGCCTGTGGTTATGGGGcatgtttcaaccgaaccaggaaagaaaatgcctctgcactcaattggatagacctccaaccaatcagagcaacggcgTATGTGACGTTCTTCTTAGCGACCATCGGGGCCAGCTGATGAATTCAACTTTTGCCGAATCCCGCAAGTGCTGAGATTACCAGAACACTACAGAGggctgctgttgtgtgtgtgatcatcCTGCCGATGTTATATTTGGTGATAGTCTATTACCGTCCCGGAGAGCTAAGACAAGAGGTTCCTACCACACAAAAGAGCCGCCCCCTCCCCCACAATTCCAGCTTGTCACTCCAGAGTCATCTTCCCCCACCTGGTCCATGCACCTGTCCAGGCGGCTCAGTGCTGCTCAAAGATCACATCCCCAAGGATCAGTATGAGAAGGTGGCCAAACGCCGAGCTAAGGAGCTCCAACAACACAAAGCCAGgACTACATCTGTATTATCGAAACTGCTGATTGCTTTGCCAAACTCTCCTCTGCAGTATCCTATCCAGGGTTTTACAGTACGACCCTTGACCACCACTCCCATACCAGGTTTAGCACTGCATGCGGAACAAAGAAGCAGCTACAAGGTGTCCTTGAATGTGTCCAAAGGGGTCCTGACTACGGAGAATCTAGCTGAAGGTGTGAAGGTCCAAGgtGGTGGTGGGACCAGACTGATTATGGAATCTAGCAGCCTGGTGATCCTCAACGATGCACTGACTAAAGTGATCTACACCAGTACTGTCTACCATATACACACTGGAGACCTCGCATCCTTCCAGTTTGAAAACCATGAAGCTGTGTTTCCCATTACCATCAAACAGCCTCAGCTGCCAGTGCTGCACGACATGGGGACAGATATCAACTCTCACGTCACCATCGCCACAAAGACATTTCTGCGCTACCCACAACTCAAGGTGTTGTTGAGTAGCATCCGGCGTTTCTATAGCAACATAGAAGTCGTCATTGCAGATGACAGCTTTGAACCAGAGCACATTACCGGAGAGCACATCCGGCAGTACTTCATGCCTCCAGCACAggGCTGGTTTGCTGGCAGGAATCTGGCCGTCTCCCAGGTAACCACCAAGTACTTCCTGTGGGTGGACGATGACTTTTTGTTCACGGAGAACACAAAGATAGAGAAGCTGGTGGAGGTGATGGAGGCGGTCCCAGAACTGGACTTGCTAGGTGGGACAGTACAAGGGAACcagttttatttctctcttctctatgaggaaggagaggaaatgGAAGGTGGCTGCCTGTACAGGAAGTCTCAACGGAAGTTCCAATCACTTCCTGGTTACCCACAATGCTTTCTGGCCAATGGGGTGGTCAACTTCTTCCTGGCTCGCACAGATGCCATCCAGAGGGTGGGATTTGACCCTAAGCTCCAAAGGGTAGCACACTCAGAGTTCTTTATGGATGGCCTGGGCTCGTTGCTGGTCGCCACGTGTGACCATGTGTCCATTGACCATCAGCCCAAAACAGGCAAAGGCAAGGACAATGCTCACTACGCTCGTTTTAGAAACCCTGGAAAGAGTGACATGGAGTTCAAACTGCAGCTTCACTTTTTCAAAAACCACCTAAAGTGTATCAAATATGGATAGACGACTACAAGAGGACATTGTGTTACATATTTCCCTGCAGTTATTCAAATAAATAGTTCTGATTCTGGGTGGCAAAACCAGGTCTGAAAAGTC
>XM_039824405.1
ggataatcagttgagatcgtgtgtgtgcgtccttgagaactAGTGCTGAGATTACCAGAACACTACAGAGggctgctgttgtgtgtgtgatcatcCTGCCGATGTTATATTTGGTGATAGTCTATTACCGTCCCGGAGAGCTAAGACAAGAGGTTCCTACCACACAAAAGAGCCGCCCCCTCCCCCACAATTCCAGCTTGTCACTCCAGAGTCATCTTCCCCCACCTGGTCCATGCACCTGTCCAGGCGGCTCAGTGCTGCTCAAAGATCACATCCCCAAGGATCAGTATGAGAAGGTGGCCAAACGCCGAGCTAAGGAGCTCCAACAACACAAAGCCAGgACTACATCTGTATTATCGAAACTGCTGATTGCTTTGCCAAACTCTCCTCTGCAGTATCCTATCCAGGGTTTTACAGTACGACCCTTGACCACCACTCCCATACCAGGTTTAGCACTGCATGCGGAACAAAGAAGCAGCTACAAGGTGTCCTTGAATGTGTCCAAAGGGGTCCTGACTACGGAGAATCTAGCTGAAGGTGTGAAGGTCCAAGgtGGTGGTGGGACCAGACTGATTATGGAATCTAGCAGCCTGGTGATCCTCAACGATGCACTGACTAAAGTGATCTACACCAGTACTGTCTACCATATACACACTGGAGACCTCGCATCCTTCCAGTTTGAAAACCATGAAGCTGTGTTTCCCATTACCATCAAACAGCCTCAGCTGCCAGTGCTGCACGACATGGGGACAGATATCAACTCTCACGTCACCATCGCCACAAAGACATTTCTGCGCTACCCACAACTCAAGGTGTTGTTGAGTAGCATCCGGCGTTTCTATAGCAACATAGAAGTCGTCATTGCAGATGACAGCTTTGAACCAGAGCACATTACCGGAGAGCACATCCGGCAGTACTTCATGCCTCCAGCACAggGCTGGTTTGCTGGCAGGAATCTGGCCGTCTCCCAGGTAACCACCAAGTACTTCCTGTGGGTGGACGATGACTTTTTGTTCACGGAGAACACAAAGATAGAGAAGCTGGTGGAGGTGATGGAGGCGGTCCCAGAACTGGACTTGCTAGGTGGGACAGTACAAGGGAACcagttttatttctctcttctctatgaggaaggagaggaaatgGAAGGTGGCTGCCTGTACAGGAAGTCTCAACGGAAGTTCCAATCACTTCCTGGTTACCCACAATGCTTTCTGGCCAATGGGGTGGTCAACTTCTTCCTGGCTCGCACAGATGCCATCCAGAGGGTGGGATTTGACCCTAAGCTCCAAAGGGTAGCACACTCAGAGTTCTTTATGGATGGCCTGGGCTCGTTGCTGGTCGCCACGTGTGACCATGTGTCCATTGACCATCAGCCCAAAACAGGCAAAGGCAAGGACAATGCTCACTACGCTCGTTTTAGAAACCCTGGAAAGAGTGACATGGAGTTCAAACTGCAGCTTCACTTTTTCAAAAACCACCTAAAGTGTATCAAATATGGATAGACGACTACAAGAGGACATTGTGTTACATATTTCCCTGCAGTTATTCAAATAAATAGTTCTGATTCTGGGTGGCAAAACCAGGTCTGAAAAGTC
>XM_039824406.1
ccggaggataatcagttgagatcgtgtgtgtgcgtccttgagaactCAGCTAAAAGTAGAGCCTGAAGAAGAGAACATGAGTGCTGAGATTACCAGAACACTACAGAGggctgctgttgtgtgtgtgatcatcCTGCCGATGTTATATTTGGTGATAGTCTATTACCGTCCCGGAGAGCTAAGACAAGAGGTTCCTACCACACAAAAGAGCCGCCCCCTCCCCCACAATTCCAGCTTGTCACTCCAGAGTCATCTTCCCCCACCTGGTCCATGCACCTGTCCAGGCGGCTCAGTGCTGCTCAAAGATCACATCCCCAAGGATCAGTATGAGAAGGTGGCCAAACGCCGAGCTAAGGAGCTCCAACAACACAAAGCCAGgACTACATCTGTATTATCGAAACTGCTGATTGCTTTGCCAAACTCTCCTCTGCAGTATCCTATCCAGGGTTTTACAGTACGACCCTTGACCACCACTCCCATACCAGGTTTAGCACTGCATGCGGAACAAAGAAGCAGCTACAAGGTGTCCTTGAATGTGTCCAAAGGGGTCCTGACTACGGAGAATCTAGCTGAAGGTGTGAAGGTCCAAGgtGGTGGTGGGACCAGACTGATTATGGAATCTAGCAGCCTGGTGATCCTCAACGATGCACTGACTAAAGTGATCTACACCAGTACTGTCTACCATATACACACTGGAGACCTCGCATCCTTCCAGTTTGAAAACCATGAAGCTGTGTTTCCCATTACCATCAAACAGCCTCAGCTGCCAGTGCTGCACGACATGGGGACAGATATCAACTCTCACGTCACCATCGCCACAAAGACATTTCTGCGCTACCCACAACTCAAGGTGTTGTTGAGTAGCATCCGGCGTTTCTATAGCAACATAGAAGTCGTCATTGCAGATGACAGCTTTGAACCAGAGCACATTACCGGAGAGCACATCCGGCAGTACTTCATGCCTCCAGCACAggGCTGGTTTGCTGGCAGGAATCTGGCCGTCTCCCAGGTAACCACCAAGTACTTCCTGTGGGTGGACGATGACTTTTTGTTCACGGAGAACACAAAGATAGAGAAGCTGGTGGAGGTGATGGAGGCGGTCCCAGAACTGGACTTGgagaggaaatgGAAGGTGGCTGCCTGTACAGGAAGTCTCAACGGAAGTTCCAATCACTTCCTGGTTACCCACAATGCTTTCTGGCCAATGGGGTGGTCAACTTCTTCCTGGCTCGCACAGATGCCATCCAGAGGGTGGGATTTGACCCTAAGCTCCAAAGGGTAGCACACTCAGAGTTCTTTATGGATGGCCTGGGCTCGTTGCTGGTCGCCACGTGTGACCATGTGTCCATTGACCATCAGCCCAAAACAGGCAAAGGCAAGGACAATGCTCACTACGCTCGTTTTAGAAACCCTGGAAAGAGTGACATGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824402.1 False 1636 mRNA 0.49 13 29171995 29198622
XM_039824403.1 False 1612 mRNA 0.49 13 29171995 29198622
XM_039824404.1 True 2207 mRNA 0.48 12 29174207 29198622
XM_039824405.1 False 1598 mRNA 0.49 12 29172000 29198622
XM_039824406.1 False 1431 mRNA 0.51 13 29171995 29198472

Neighbor

gene id symbol gene type direction distance location
LOC120574188 NA coding upstream 15617 29123210 ~ 29156378 (+)
nags nags coding upstream 52979 29104664 ~ 29119016 (+)
LOC120574945 LOC100697339,LOC101476507,LOC102792132,LOC102298486 coding upstream 186369 28975950 ~ 28985626 (+)
rpain rpain,LOC102791362 coding upstream 213011 28955120 ~ 28958984 (+)
abat abat coding upstream 218045 28916058 ~ 28953950 (+)
LOC120574190 NA coding downstream 13843 29212465 ~ 29215793 (+)
col1a1a col1a1,LOC104944135 coding downstream 100790 29299412 ~ 29326460 (+)
pex12 pex12,LOC102797618 coding downstream 220346 29418968 ~ 29425336 (+)
LOC120574120 LOC103367371 coding downstream 332778 29531400 ~ 29544306 (+)
LOC120575283 NA coding downstream 484666 29683288 ~ 29757671 (+)
G158987 NA non-coding upstream 51007 29120778 ~ 29120988 (+)
G158975 NA non-coding upstream 68327 29103270 ~ 29103668 (+)
G158923 NA non-coding upstream 183323 28988164 ~ 28988672 (+)
G158925 NA non-coding upstream 190131 28981409 ~ 28981864 (+)
G158922 NA non-coding upstream 196985 28974779 ~ 28975010 (+)
G159060 NA non-coding downstream 192587 29391209 ~ 29391965 (+)
G159064 NA non-coding downstream 200088 29398710 ~ 29398910 (+)
G159070 NA non-coding downstream 215717 29414339 ~ 29418732 (+)
G159063 NA non-coding downstream 232620 29431242 ~ 29433842 (+)
G159071 NA non-coding downstream 250522 29449144 ~ 29454487 (+)
LOC120574944 LOC104926834,LOC101476208,LOC100703712,LOC103358663,LOC108247076,LOC106525245 other upstream 186348 28960147 ~ 28985647 (+)
mettl22 mettl22 other upstream 256066 28886918 ~ 28915929 (+)
prrg2 NA other upstream 390645 28776073 ~ 28781350 (+)
rras rras other upstream 404381 28739668 ~ 28767614 (+)
G158767 gps1 other upstream 639365 28526835 ~ 28532630 (+)
LOC120574189 LOC103364161 other downstream 1958 29200580 ~ 29207687 (+)
LOC120575282 NA other downstream 167221 29365843 ~ 29382617 (+)
G159073 hdac5 other downstream 270303 29468925 ~ 29471599 (+)
LOC120574203 NA other downstream 1034082 30232704 ~ 30246893 (+)
LOC120575288 NA other downstream 1041688 30240310 ~ 30303552 (+)

Expression


Co-expression Network