G159070


Basic Information

Item Value
gene id G159070
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 29414339 ~ 29418732 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU215614
AGTATGTTAACATTCTATGATGAAATCTTATGAGATAGGGCGCCTACTCTAGCCTGTTAGTCCTCTATAATGTTTTATAACattgaggaaatgcagaaatTATTTAGAAACGCACAAAAGCAGCGACATATAGAAAATGCCTTAATAACagaaaaattacttttgatacttaagtacagcaaACATTCGAAAACTCTAAGACTTtcactcaagtaatattctaaaaggtgactttaacttcttctaccaaagtcatttatctggtaagatacttgtacttttactcaagtactgagtattGAGAGTATTTTTCAGAGGGTGAGACAGATTGATGACCAACAGAGAAATAAACAAAAGCACACGTTAAAATCAAAGCTAAGAGTACAAAAAATATTCTACTCAACTAAACGTACTATCACTTTGATGtattcttttacttaagtacaagtaaaTACTTAATATACTTATTTAAATTGCAGTCTTTTGTGATTTGTTAAGGGCACAAAGCCATATGTCTTTTAACCAAGCAGATTCAAAGAAGAGTACCTTTATCTTAGCGCCAGTTATTACTAATTTTCAATTAGTTCTTTTATTTTAGTGTTGacttttctatttcattttagttgtctgtgtgacTGCTAGTGttagtttagtttcagtttgtcagaatgatttagttttttatatttttggttGTACAGTAGTTTTAGTATAATGTCTCAGTAgctacacacacagcacatacaaATTCCAGGGGTGGAGAACGGTATGGGAACAGCCATGATGTTTAAGGTTTAATCTCTGGCTGCTTTAGTATCAGGTAGTCAAGTCTGTTCAATTTCTGTGGTTCAGTGTCCTGAGAGTTGATGGAAATTcatcctgtcttttttttttttttttttaccttttacagTATTAAACAACAAACTAAATGGGTCCGGAAATGCAAGGTACATCACCGACAGATGATTCAACTGCACTGAAGTGCTTTCAGGtggagttcttttttttttttcctttaacaaAACCAGAATCCGAACAGCCTAGTTGTGTCTGAAAAGCTTGATCCCCATCCAGCTCCAGAGGTGGAAGAAGACGTAGACGGGGATGGTGATGGGCAGCAACAGGCTGTAGAAACACACGCTGCTACTGCTTGTGCAGCCCTGAGGGAAGTTCTCGTCCACTGCAGCCGAGTAGAACAGACCGAAGAGCGACACTATTGGGACCAGGCCCACCATCACGGACAGGGAGAACATACTTGCAGATGGGTTTCTAATACAGGACACTAAAGGTGATGTATTACATGTAGTTTTAGCCAGGTGGCTAAAAATGCAGTTTggaagtattttatttattcagtccAGCAACCTTTAAAACTCAAAATGTAAGAGTTTAAAGTCAGAGACACGTCCCCCTGAAGTCGGACAACAAAGTGCGTCAGTACCCAGAGCTCAAAATCCAATATGGCTGCTCCGCGCgtcaacagtagtgaaagcgTAGTAACATGCAGTTTATTAGCACGTCTGTCATTAAATAAGACGTACACaccacacagtcctgtccaacttctatctgtggctATGTTGCTACGCCGTTTGTTTGCACAAAAGCAGCGTAAATGCGTTGTTATCGGCTGCTGtcgctaacaatggctaacctggctagcgctaaacccactgTGAATTCCGAAGTGTGTTGTTGCTTGGGTGGCGAGCCGAAGGTGGTGACCCGAGTTTTTACTCCTGTGTTGGCGAGGTTGAGGCGTCTGCGTCTTTCTGCAGGAGTCTGGCTTCCTGGGGGATCATGTTGGGGATGCCGTTAACTACGGGATAGGCGATGCCCAGCTCCTCGTTGATGAGCTCGCTGGTCTCAGCCTCGTATCTCAGCGGCTTCTTGGACAGCGGACACACCAGGAACTCAAGCAGGGAGGTGTCAAAAGGCTGCTGCTGCACTTCGTCCTTCACGTCCGAGAAGCTCCTGGCCGGGACAGAGTCGGCTGTTGCCCTCTGTATTAAAGGTGCATTCTTCAAATAGCGGTGCACACGGATCGGTTCCGTTAACAATCTACCGAAAACATTCCGAAACATGACCAAAACTCACGCCAAAACTGGTCAACAAGGTAGCGAAAACTCCCCCGACGGAGGAttaccatggacgtattaagGGTGATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215614 True 2172 lncRNA 0.42 2 29414339 29418732

Neighbor

gene id symbol gene type direction distance location
col1a1a col1a1,LOC104944135 coding upstream 87879 29299412 ~ 29326460 (+)
LOC120574190 NA coding upstream 198546 29212465 ~ 29215793 (+)
LOC120574186 NA coding upstream 215717 29171995 ~ 29198622 (+)
LOC120574188 NA coding upstream 257961 29123210 ~ 29156378 (+)
nags nags coding upstream 295323 29104664 ~ 29119016 (+)
pex12 pex12,LOC102797618 coding downstream 236 29418968 ~ 29425336 (+)
LOC120574120 LOC103367371 coding downstream 112668 29531400 ~ 29544306 (+)
LOC120575283 NA coding downstream 264556 29683288 ~ 29757671 (+)
LOC120574202 NA coding downstream 371065 29789797 ~ 29956543 (+)
LOC120574205 NA coding downstream 489564 29908296 ~ 29914682 (+)
G159064 NA non-coding upstream 15429 29398710 ~ 29398910 (+)
G159060 NA non-coding upstream 22374 29391209 ~ 29391965 (+)
G158987 NA non-coding upstream 293351 29120778 ~ 29120988 (+)
G158975 NA non-coding upstream 310671 29103270 ~ 29103668 (+)
G158923 NA non-coding upstream 425667 28988164 ~ 28988672 (+)
G159063 NA non-coding downstream 12510 29431242 ~ 29433842 (+)
G159071 NA non-coding downstream 30412 29449144 ~ 29454487 (+)
G159075 NA non-coding downstream 78425 29497157 ~ 29497462 (+)
G159077 NA non-coding downstream 95785 29514517 ~ 29514970 (+)
G159079 NA non-coding downstream 106407 29525139 ~ 29525391 (+)
LOC120575282 NA other upstream 31722 29365843 ~ 29382617 (+)
LOC120574189 LOC103364161 other upstream 206652 29200580 ~ 29207687 (+)
LOC120574944 LOC104926834,LOC101476208,LOC100703712,LOC103358663,LOC108247076,LOC106525245 other upstream 428692 28960147 ~ 28985647 (+)
mettl22 mettl22 other upstream 498410 28886918 ~ 28915929 (+)
prrg2 NA other upstream 632989 28776073 ~ 28781350 (+)
G159073 hdac5 other downstream 50193 29468925 ~ 29471599 (+)
LOC120574203 NA other downstream 813972 30232704 ~ 30246893 (+)
LOC120575288 NA other downstream 821578 30240310 ~ 30303552 (+)
mpp2a mpp2,LOC101475212,LOC100701914 other downstream 1047056 30465788 ~ 30483713 (+)
G159484 csnk1d,LOC106596082,LOC106595407,LOC103154369 other downstream 1733827 31152559 ~ 31158441 (+)

Expression


Co-expression Network