LOC120574205


Basic Information

Item Value
gene id LOC120574205
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 29908296 ~ 29914682 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824430.1
AGGAAGTGTTCCAGGAAGGACTAGCAGTGTGAAGTCTTCTTTCCTCCGCAGTATTTCACTGATAAATGATAAAGAGCAGCCTTAGTGTCAGCCATGGGGAGCAAACAACAGAGAAACATTTGCCATTTGGCCATGGTTTATTTTATCTTGAGTTCAACTTCACCTGCTGCAGATGGTCAGATCAGATTAACTGGGTCTGGGTCTACTCGGTGCTCTGGAAGAGTTGAAATCTATTACAACAACATCTGGGGAACAGTCTGTGATGATAATTGGGACTTAAACGATGCTGAGGTGGTTTGCAGACAGTTGGGCTGTGATACGGCACTGAGTGCCCCTCAGTCAGCCCGCTTTGGTGTAGGAACTGGACAAATCTGGCTTGATGATGTAGCCTGTACAGGAAATGAGAGGTCTCTAACTCAGTGTAAGCACAGTGGATTTGGGACACACAACTGTGGACATAGTGAGGATGCTGGTGTTGTCTGTTCAGGTGTCAGATTGTCTGGGTCTACTCTGTGCTCTGGAAGAGTTGAAATATATCACAACAACATCTGGGGAACAGTCTGTGATGATGATTGGGACTTAAACGATGCTGAGGTGGTTTGCAGAGAGTTGGGCTGTGGTACGGCACTGACTGCTACTCAGTCAGCCCACTTTGGTGAAGGTACCGGAGAAATCTGGTTTGATGATGTGGCCTGTTCAGGAAGTGAGAGgtctgtaactctgtgtcagCACAGTGGATTTGGGACACACAACTGTGGACATGGAGAGGATGCTGGTGTGGTCTGTTCAGTACTCCTCCCTAAGCTCAGCATCTCCATGAATCCTGCTGCTAAGGTTACCTGGGGTCAGAACGTCGGCATCACTTGTTCTGTCTTAACTCAAACTCAACAGATTTTAagttcaacatttattttgaaaaaggctTCAAGTTCAGTTGGAGAAACCCAAACATCAAGTACCAACTCTGCTACCTTCAACATACCTAAAGTCAACTTTGACAATGAAGGATCATACCAGTGTCAGTATAAGATAACAGTTGCAGGTCAAGACTTCACCTCCTCAAGTGACTCTGTCAGCCTTTCTGTTACTGtgagcCTCCCGAAACCTCGCATATCCATGAATCCTGTTGGTGAGGTTACCTGGGGTCAAGATGTTGGCATCACTTGTTTGATCTCAACTCAGGTTTTAGGTGGGACATTCATCCTGCAGCACTCCTCAGGCTCAACCAGAAAGACCAAACGCGTACCAACTCTGCTACCTTCAACATTGTCCAAGTGGACTTTCACAACGAAGGATCGTACCAGTGTCAGTATCAGACAAGGAGTTCAAGTCAAAACTTCATCTCACCCCAAAGTAACGTTGTCAGACTCTCCGTTTCTGtgctgctgcagcagccCAGCATCTCCCTAACATCTCCTAACAGAGGGCTGGTCTGGGGCCCTGAAGGTGCACAGATCACCAGGGGTTTCAGCTTTGTCTTCACctgctccacttcctcccattaTCCTGGAGGTGTTTTCCATCTCATCTTCTCTGGTTCAAACCTCACCAACACAGAGCCAGCAGTCAACCAGTCAGCCTCCTTTTCCTTCCCAGTGGCTGAATATGAACAACAGGGCAACTACAGCTGTGTGTATGAAGTCACACTGTCCTCGAGAAGATTCACTTCTACACAGACAGCACAGATTAGTGTCGCCA

Function

GO:

id name namespace
GO:0042611 MHC protein complex cellular_component
GO:0042613 MHC class II protein complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824430.1 True 1698 mRNA 0.47 7 29908296 29914682

Neighbor

gene id symbol gene type direction distance location
LOC120575283 NA coding upstream 150625 29683288 ~ 29757671 (+)
LOC120574120 LOC103367371 coding upstream 363990 29531400 ~ 29544306 (+)
pex12 pex12,LOC102797618 coding upstream 482960 29418968 ~ 29425336 (+)
col1a1a col1a1,LOC104944135 coding upstream 581836 29299412 ~ 29326460 (+)
LOC120574190 NA coding upstream 692503 29212465 ~ 29215793 (+)
LOC120574207 NA coding downstream 22241 29936923 ~ 29941595 (+)
LOC120575284 LOC105940647 coding downstream 145201 30059883 ~ 30069034 (+)
LOC120575286 NA coding downstream 287768 30202450 ~ 30226389 (+)
LOC120575287 NA coding downstream 337956 30252638 ~ 30293501 (+)
LOC120575289 NA coding downstream 456756 30371438 ~ 30373398 (+)
G159140 NA non-coding upstream 24600 29883096 ~ 29883696 (+)
G159139 NA non-coding upstream 29747 29878294 ~ 29878549 (+)
LOC120574209 NA non-coding upstream 52532 29854683 ~ 29855764 (+)
G159136 NA non-coding upstream 56925 29851157 ~ 29851371 (+)
G159130 NA non-coding upstream 73983 29834083 ~ 29834313 (+)
LOC120574210 NA non-coding downstream 202337 30117019 ~ 30118163 (+)
G159294 NA non-coding downstream 569216 30483898 ~ 30486488 (+)
G159298 NA non-coding downstream 606803 30521485 ~ 30522084 (+)
G159300 NA non-coding downstream 639081 30553763 ~ 30554019 (+)
G159306 NA non-coding downstream 731723 30646405 ~ 30647091 (+)
G159073 hdac5 other upstream 436697 29468925 ~ 29471599 (+)
LOC120575282 NA other upstream 525679 29365843 ~ 29382617 (+)
LOC120574189 LOC103364161 other upstream 700609 29200580 ~ 29207687 (+)
LOC120574944 LOC104926834,LOC101476208,LOC100703712,LOC103358663,LOC108247076,LOC106525245 other upstream 922649 28960147 ~ 28985647 (+)
mettl22 mettl22 other upstream 992367 28886918 ~ 28915929 (+)
LOC120574203 NA other downstream 318022 30232704 ~ 30246893 (+)
LOC120575288 NA other downstream 325628 30240310 ~ 30303552 (+)
mpp2a mpp2,LOC101475212,LOC100701914 other downstream 551106 30465788 ~ 30483713 (+)
G159484 csnk1d,LOC106596082,LOC106595407,LOC103154369 other downstream 1237877 31152559 ~ 31158441 (+)
G159833 NA other downstream 2517067 32431749 ~ 32445464 (+)

Expression


Co-expression Network