LOC120574209


Basic Information

Item Value
gene id LOC120574209
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 29854683 ~ 29855764 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641840.1
TCACTGATAAATGAGACAGAGCAGCCTTAGTGTCAGCCATGGGGAGCAAACAACAGAGAAACATTTGCCATTTGGCCATGGTCTATTTTCTCTTGAGTTCAACTTCACCTGCTGCAGATGGTCAGATCAGATTAACTGGGTCTGGGTCTACTCGGTGCTCTGGAAGAGTTGAAATCTATTACAACAACACCTGGGGAACAGTCT

Function

GO: NA

KEGG:

id description
ko04666 Fc gamma R-mediated phagocytosis

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641840.1 True 204 lncRNA 0.46 3 29854683 29855764

Neighbor

gene id symbol gene type direction distance location
LOC120575283 NA coding upstream 97012 29683288 ~ 29757671 (+)
LOC120574120 LOC103367371 coding upstream 310377 29531400 ~ 29544306 (+)
pex12 pex12,LOC102797618 coding upstream 429347 29418968 ~ 29425336 (+)
col1a1a col1a1,LOC104944135 coding upstream 528223 29299412 ~ 29326460 (+)
LOC120574190 NA coding upstream 638890 29212465 ~ 29215793 (+)
LOC120574205 NA coding downstream 52532 29908296 ~ 29914682 (+)
LOC120574207 NA coding downstream 81159 29936923 ~ 29941595 (+)
LOC120575284 LOC105940647 coding downstream 204119 30059883 ~ 30069034 (+)
LOC120575286 NA coding downstream 346686 30202450 ~ 30226389 (+)
LOC120575287 NA coding downstream 396874 30252638 ~ 30293501 (+)
G159136 NA non-coding upstream 3312 29851157 ~ 29851371 (+)
G159130 NA non-coding upstream 20370 29834083 ~ 29834313 (+)
G159098 NA non-coding upstream 178392 29675338 ~ 29676291 (+)
G159093 NA non-coding upstream 199764 29654622 ~ 29654919 (+)
G159090 NA non-coding upstream 246291 29598759 ~ 29608392 (+)
G159139 NA non-coding downstream 22530 29878294 ~ 29878549 (+)
G159140 NA non-coding downstream 27332 29883096 ~ 29883696 (+)
LOC120574210 NA non-coding downstream 261255 30117019 ~ 30118163 (+)
G159294 NA non-coding downstream 628134 30483898 ~ 30486488 (+)
G159298 NA non-coding downstream 665721 30521485 ~ 30522084 (+)
G159073 hdac5 other upstream 383084 29468925 ~ 29471599 (+)
LOC120575282 NA other upstream 472066 29365843 ~ 29382617 (+)
LOC120574189 LOC103364161 other upstream 646996 29200580 ~ 29207687 (+)
LOC120574944 LOC104926834,LOC101476208,LOC100703712,LOC103358663,LOC108247076,LOC106525245 other upstream 869036 28960147 ~ 28985647 (+)
mettl22 mettl22 other upstream 938754 28886918 ~ 28915929 (+)
LOC120574203 NA other downstream 376940 30232704 ~ 30246893 (+)
LOC120575288 NA other downstream 384546 30240310 ~ 30303552 (+)
mpp2a mpp2,LOC101475212,LOC100701914 other downstream 610024 30465788 ~ 30483713 (+)
G159484 csnk1d,LOC106596082,LOC106595407,LOC103154369 other downstream 1296795 31152559 ~ 31158441 (+)
G159833 NA other downstream 2575985 32431749 ~ 32445464 (+)

Expression


Co-expression Network