LOC120575287


Basic Information

Item Value
gene id LOC120575287
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 30252638 ~ 30293501 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826007.1
AGCCTTAGTGTCAGCCATGGGGAGCAAACAACAGAGAAACCTTAACCATTTGGCCATGGTCTATTTTCTCTTGAGTTCAACTTCACCTGCAGCAGATGGTCAGATCAGATTAGCTTGGTCTGGGTCTACTCTGTGCTCTGGAAGAGTTGAAATCTATTACAACAACACCTGGGGAACAGTCTGTGATGATAGCTGGGACTCAGATGATGCTAAGGTGGTTTGCAGAGAGTTGGGCTGTGATACGGCACTGAGTGCCCCTCATTCATCAGCCTACTTTGGTGAAGGAACCGGACAAATCTGGCTTGATGATGTGGCTTGTTCAGGAAATGAGAGGTCTCTAACTCAGTGTAAGCACAACAGATTTGGGACACACAACTGTGGACATGGAGAGGATGCTGGTGTTGTATGTTCAGGTGTCAGATTGGCTGGGTCTACTCTGTGCTCTGGGCGAGTTGAAATATATTACAACAAAACCTGGGGAACAGTCTGTGATGATGGTTGGGACTTAAACGATGCTGAGGTGGTTTGCAGAGAGTTGGGCTGTGGTACGGCACTGAGTGCCACTCAATCAGCCTCTTTTGGTGAAGGAACCGGACAAATCTGGCTTGATGATGTGGCCTGTTCAGGAAGTGAGAGgtctgtaactctgtgtcagCACAGAGGATTTGGGACACACAACTGTGGACATGGAGAGGATGCAGGTGTGGTCTGTTCAGGTGTCCGATTGGCTGGGTCTACTCTGTGCTCTGGGCGAGTTGAAATATATTACAAGAATATCTGGGGAACAGTTTGTGATGATTATTGGGACTTAAACGATGCTGAGGTGGTTTGCAGAGAGTTGGGCTGTGGTACGGCACTGAATGCCCCTAAATCAGCCCACTTTGGTGAAGGAACCGGAGAAATCTGGCTTGATGATGTGGCCTGTTCAGGAAGTGAGAGGTCTGTAACTCAGTGTCAGCACAGAGGATTTGGGACACACAACTGTGGACATGGGGAGGATGCTGGTGTGGTCTGTTCAGCACTCCTCCCTAAGCCCAACATCTCCATGAATCCTGCTGCTGAGGTTACCTGGGGTCAGAACGTCGACATCACTTGTTCTGTCTCAACTCAAACTCAACAGATTTTAAGtccaacatttattttgaaaaaggctTCAAGTTCAGTTGGAGAAACCCAAATGTCAAGTACCAACTCTGCTACCTTCATCATGCCTAAAGTCAACTTTGACAACGAAGGATCATACCAGTGTCAGTATAAGATAACAGTTGCAGGTCAAGACTTCACCTCCTCAAGTGACTCTGTCAGCCTCTCTGTTACTGtgagcCTCCCGACACCCAGCATATCCATGAATCCTGTTGGTGAGGTTACCTGGGGTCAAGATGTTGGCATCACTTGTTTGATCTCAACTCAGGTTTTAGGAGGGACATTCATCCTGCAGCACTCCTCAGGTTCATccagaaagacagaaacacgTACCAACTCTGCTACCTTCAACATTGTCCAAGTGGACTTTCCCAATGAAGGATCGTACCAGTGTCAGTATCAGACAAGGAGTTCAAGTCAAGACTTCATCTCACCCCAAAGTAACTTTGTCAGATTCTCTGTTTCTGTGCCGCTGCAGCAGCCCAACATCTCCCTAACATCTCCTAACAGAGGGCTGGTCTGGGGCCCTGAAGGTGCACAGATCACCAGGGGTTTCAGCTTTGTCTTCACctgctccacttcctcccattaTCCTGGAGGTGTTTTCCATCTCATCTTCTCTGGTTCAAACCTCACCAACACAGAGCCAGCAGTCAACCAGTCAGCCTCCTTTTCCTTCCTGGTGGCTGAGTATGAACAACAGGGCAACTACAGCTGTGTGTATGAAGTCACACTGTCCTCGAGAAGATTCACTTCTACACAGACAGCAACtattagagtcgtcattaaaaTCTATTTTGTCTTGAGTTCAACTTCACCTGCTGCAGATGGTCGGATCAGATTAACTGGGTCGGGGTCTACTTGGTGCTCTGGAAGAGTTGAAATCTATTACAACAACACCTGGGGAACAGTCTGTGATGATGGTTGGGACTCAGATGATGCTAAGGTGGTTTGCAGAGAGTTGGGCTGTGATACGGCACTGAGTGCCCCTAAATCAGCCCGCTTTGGTGAAGGAACTGGACGAATTTGGCTTGATGATGTGGCCTGTTCAGGAAATGAGAGGTCTGTAACTCTGTGTAAGCACAGTGGATTTGGGACACATGACTGTGGACATGGAGAGGATGCTGGTGTTATCTGTTCAGGTGAGAAAGATTTTGGATAA

Function

GO:

id name namespace
GO:0019222 regulation of metabolic process biological_process
GO:0080090 regulation of primary metabolic process biological_process
GO:0065009 regulation of molecular function biological_process
GO:0051171 regulation of nitrogen compound metabolic process biological_process
GO:0030162 regulation of proteolysis biological_process
GO:0051246 regulation of protein metabolic process biological_process
GO:0060255 regulation of macromolecule metabolic process biological_process
GO:0050790 regulation of catalytic activity biological_process
GO:0052547 regulation of peptidase activity biological_process
GO:0051336 regulation of hydrolase activity biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826007.1 True 2305 mRNA 0.48 10 30252638 30293501

Neighbor

gene id symbol gene type direction distance location
LOC120575286 NA coding upstream 26249 30202450 ~ 30226389 (+)
LOC120575284 LOC105940647 coding upstream 183604 30059883 ~ 30069034 (+)
LOC120574202 NA coding upstream 296095 29789797 ~ 29956543 (+)
LOC120574207 NA coding upstream 311043 29936923 ~ 29941595 (+)
LOC120574205 NA coding upstream 337956 29908296 ~ 29914682 (+)
LOC120575289 NA coding downstream 77937 30371438 ~ 30373398 (+)
hspb9 NA coding downstream 127254 30420755 ~ 30423001 (+)
pyya LOC105939715,LOC102296892,LOC103154351,LOC100702181,LOC102223162 coding downstream 156130 30449631 ~ 30460100 (+)
LOC120573894 LOC104928682,LOC103364173,LOC101465824,LOC102297185 coding downstream 194739 30488240 ~ 30520047 (+)
LOC120574868 LOC100691722,LOC101475508 coding downstream 337599 30631100 ~ 30645272 (+)
LOC120574210 NA non-coding upstream 134475 30117019 ~ 30118163 (+)
G159140 NA non-coding upstream 368942 29883096 ~ 29883696 (+)
G159139 NA non-coding upstream 374089 29878294 ~ 29878549 (+)
LOC120574209 NA non-coding upstream 396874 29854683 ~ 29855764 (+)
G159136 NA non-coding upstream 401267 29851157 ~ 29851371 (+)
G159294 NA non-coding downstream 190397 30483898 ~ 30486488 (+)
G159298 NA non-coding downstream 227984 30521485 ~ 30522084 (+)
G159300 NA non-coding downstream 260262 30553763 ~ 30554019 (+)
G159306 NA non-coding downstream 352904 30646405 ~ 30647091 (+)
G159311 NA non-coding downstream 359641 30653142 ~ 30653716 (+)
LOC120574203 NA other upstream 5745 30232704 ~ 30246893 (+)
G159073 hdac5 other upstream 781039 29468925 ~ 29471599 (+)
LOC120575282 NA other upstream 870021 29365843 ~ 29382617 (+)
LOC120574189 LOC103364161 other upstream 1044951 29200580 ~ 29207687 (+)
LOC120574944 LOC104926834,LOC101476208,LOC100703712,LOC103358663,LOC108247076,LOC106525245 other upstream 1266991 28960147 ~ 28985647 (+)
mpp2a mpp2,LOC101475212,LOC100701914 other downstream 172287 30465788 ~ 30483713 (+)
G159484 csnk1d,LOC106596082,LOC106595407,LOC103154369 other downstream 859058 31152559 ~ 31158441 (+)
G159833 NA other downstream 2138248 32431749 ~ 32445464 (+)
LOC120574088 NA other downstream 2170861 32464362 ~ 32465533 (+)
G159938 NA other downstream 2868894 33162395 ~ 33162811 (+)

Expression


Co-expression Network