Gene
RNA
| Item | Value |
|---|---|
| gene id | G159098 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053126.1 |
| NCBI id | CM020923.1 |
| chromosome length | 38831509 |
| location | 29675338 ~ 29676291 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU215646 | True | 658 | lncRNA | 0.48 | 2 | 29675338 | 29676291 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120574120 | LOC103367371 | coding | upstream | 131032 | 29531400 ~ 29544306 (+) |
| pex12 | pex12,LOC102797618 | coding | upstream | 250002 | 29418968 ~ 29425336 (+) |
| col1a1a | col1a1,LOC104944135 | coding | upstream | 348878 | 29299412 ~ 29326460 (+) |
| LOC120574190 | NA | coding | upstream | 459545 | 29212465 ~ 29215793 (+) |
| LOC120574186 | NA | coding | upstream | 476716 | 29171995 ~ 29198622 (+) |
| LOC120575283 | NA | coding | downstream | 6997 | 29683288 ~ 29757671 (+) |
| LOC120574202 | NA | coding | downstream | 113506 | 29789797 ~ 29956543 (+) |
| LOC120574205 | NA | coding | downstream | 232005 | 29908296 ~ 29914682 (+) |
| LOC120574207 | NA | coding | downstream | 260632 | 29936923 ~ 29941595 (+) |
| LOC120575284 | LOC105940647 | coding | downstream | 383592 | 30059883 ~ 30069034 (+) |
| G159093 | NA | non-coding | upstream | 20419 | 29654622 ~ 29654919 (+) |
| G159090 | NA | non-coding | upstream | 66946 | 29598759 ~ 29608392 (+) |
| G159089 | NA | non-coding | upstream | 80860 | 29594260 ~ 29594478 (+) |
| G159088 | NA | non-coding | upstream | 81845 | 29593258 ~ 29593493 (+) |
| G159087 | tanc2 | non-coding | upstream | 82358 | 29592677 ~ 29592980 (+) |
| G159130 | NA | non-coding | downstream | 157792 | 29834083 ~ 29834313 (+) |
| G159136 | NA | non-coding | downstream | 174866 | 29851157 ~ 29851371 (+) |
| LOC120574209 | NA | non-coding | downstream | 178392 | 29854683 ~ 29855764 (+) |
| G159139 | NA | non-coding | downstream | 202003 | 29878294 ~ 29878549 (+) |
| G159140 | NA | non-coding | downstream | 206805 | 29883096 ~ 29883696 (+) |
| G159073 | hdac5 | other | upstream | 203739 | 29468925 ~ 29471599 (+) |
| LOC120575282 | NA | other | upstream | 292721 | 29365843 ~ 29382617 (+) |
| LOC120574189 | LOC103364161 | other | upstream | 467651 | 29200580 ~ 29207687 (+) |
| LOC120574944 | LOC104926834,LOC101476208,LOC100703712,LOC103358663,LOC108247076,LOC106525245 | other | upstream | 689691 | 28960147 ~ 28985647 (+) |
| mettl22 | mettl22 | other | upstream | 759409 | 28886918 ~ 28915929 (+) |
| LOC120574203 | NA | other | downstream | 556413 | 30232704 ~ 30246893 (+) |
| LOC120575288 | NA | other | downstream | 564019 | 30240310 ~ 30303552 (+) |
| mpp2a | mpp2,LOC101475212,LOC100701914 | other | downstream | 789497 | 30465788 ~ 30483713 (+) |
| G159484 | csnk1d,LOC106596082,LOC106595407,LOC103154369 | other | downstream | 1476268 | 31152559 ~ 31158441 (+) |
| G159833 | NA | other | downstream | 2755458 | 32431749 ~ 32445464 (+) |
