G158807


Basic Information

Item Value
gene id G158807
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 28650686 ~ 28675291 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU215262
ccggaagtggtaggtcatggatatagactaggttgCTGTGAACAACTTTACATGATGGGCAGAAAGTTGGAGAAAGGATGGccgggggggggtggggCGGGGTCATTGTAATGACCATACAGGAGGGCCAAAGTGACTCGACGGTAACACTAGGCAGACATGTCAGCACGGCTATCGTGTCGGGTGTCTGTATGGGTCGCCACACGTGCCAAAGACATGAACAACCCAAAAAAGGATGTTGGGACACAGACGACCGGGGAACACGTCAAAACGTGCATTTTGTTGAGCGACTACAGCACAATGAATCACCACGCCAATGCACTTTGACCCCCAAAGATGTGAAGACCTTTTAAATACTGTTAACGTTTGAACATGAAAATGAcccaaaaactaaacaaaaaaaatacaattattaaaatGTTGCTGCATGGGGGAGGATCAAACTATTGTACAGACTCCAAGTCAAACAGCATAATATGTCCTCTTATAAAGACAAAACTAAACACAGGGAGGGAGTGACGCTTCTAACGCATCCTGTACTCGGACGTCTTCGACACCTCACACAGCTGACCCTTGAAGTCGATGTCTACGGTGAAGTCCAGGTCcctctgcaaaaaaaacaacaagcaaGCGGTCAGGCAAGACGCACACGGCCAAACAGGTGACGACGCGACAAGACAGTTGAAAG

Function

GO: NA

KEGG:

id description
ko03050 Proteasome

RNA

RNA id representative length rna type GC content exon number start site end site
TU215262 True 688 lncRNA 0.48 2 28650686 28675291

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-72e1.9 LOC103365753 coding upstream 332578 28213059 ~ 28318108 (+)
smim22 NA coding upstream 571289 28072589 ~ 28079397 (+)
LOC120574550 NA coding upstream 587891 28057650 ~ 28062795 (+)
rgs9a rgs9,LOC101473220,LOC102302237,LOC101080113 coding upstream 651724 27962022 ~ 27998962 (+)
slc16a6b LOC103363453 coding upstream 722026 27913740 ~ 27928660 (+)
ap2a1 LOC103373570,LOC104937940 coding downstream 10398 28685689 ~ 28727241 (+)
si:ch211-195b15.8 LOC108248462,LOC106526370,LOC105939812,LOC102226595 coding downstream 53876 28729167 ~ 28736585 (+)
prr12b prr12,LOC103373617 coding downstream 106574 28781865 ~ 28822148 (+)
tspan4b LOC103363438,LOC103393501 coding downstream 149493 28824784 ~ 28838251 (+)
LOC120575239 nosip coding downstream 183712 28859003 ~ 28867282 (+)
G158781 snrnp70,LOC106583923 non-coding upstream 79320 28568221 ~ 28571366 (+)
G158770 NA non-coding upstream 105194 28545228 ~ 28545492 (+)
G158756 LOC103381979 non-coding upstream 114823 28533562 ~ 28535863 (+)
G158763 gps1,LOC104953903 non-coding upstream 128503 28520443 ~ 28522183 (+)
G158757 NA non-coding upstream 156514 28483545 ~ 28494172 (+)
G158811 NA non-coding downstream 92420 28767711 ~ 28767968 (+)
G158810 NA non-coding downstream 93011 28768302 ~ 28769615 (+)
G158818 NA non-coding downstream 99447 28774738 ~ 28774956 (+)
G158917 NA non-coding downstream 279230 28954521 ~ 28954769 (+)
G158922 NA non-coding downstream 299488 28974779 ~ 28975010 (+)
G158767 gps1 other upstream 118056 28526835 ~ 28532630 (+)
G158612 NA other upstream 598237 28048512 ~ 28052449 (+)
smg1 smg1 other upstream 989063 27601793 ~ 27661623 (+)
LOC120575279 NA other upstream 1249718 27399876 ~ 27400968 (+)
G158291 nsf,LOC101477540,LOC102297066,LOC100697603 other upstream 2022650 26575639 ~ 26628036 (+)
rras rras other downstream 64377 28739668 ~ 28767614 (+)
prrg2 NA other downstream 100782 28776073 ~ 28781350 (+)
mettl22 mettl22 other downstream 211627 28886918 ~ 28915929 (+)
LOC120574944 LOC104926834,LOC101476208,LOC100703712,LOC103358663,LOC108247076,LOC106525245 other downstream 284856 28960147 ~ 28985647 (+)
LOC120574189 LOC103364161 other downstream 525289 29200580 ~ 29207687 (+)

Expression


Co-expression Network