s1pr5a (s1pr5,LOC103393734,LOC104952115)


Basic Information

Item Value
gene id s1pr5a
gene name s1pr5,LOC103393734,LOC104952115
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 3403000 ~ 3407242 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826331.1
CCCACTGTGACTGTACCACTGAGCGCATGTTGAGTCCTGCCCTGCTCCTTTCCCACAGCACACTCGCATGTCGCTGCGGTGCACTCATCCACGGagccccgtctctctctctccggctGTGGGATCACTTCTCCTGCGACTGAAGGCTCACTGGATAATTACACGTTTTTACAGGCTGGCTCTCGTCTCCGCCTAGTGCGCAGCCCGGgcattgacaaaatgtgatttattttggaGGAAAATTCAACCACAGGAAATCCTATTTGATAGCATCAAAAGGAAAACTTCAAGTGGACTGCTTCTGTCTTTTCAATACCAAGAAAGAATGCACAGCCAGAGGATTATATGACGTCTTCTCTGTGGATCTAAAActtaaaaaccaaaagaaagaagaaaagaaagaagaatctATCCAGTGGAAGTACATAAAGAATGGCCACAGAGTCTTTCCATGCTGCGTACGCTGCTGTAGCTCCATCCGCAATCCCCATGTCGCCCTCCACAGGAAACCTGCTTCGGATGTTTCAGGAGTACCAGAGCAACGCGGTCATCATCGACCACTACAACTTCACGGGCAAACTGCCCAAGAACAAGTACAAAGAAGGACTCACCCCGGAGGCCATCGCCTTCCTGCTCGTCTGCCTGCTCATCGTCGCCGAAAACGCCGTGGTGCTTCTGGCTATCTGGAAGAACAAGAAATTCCACGTGCCCATGTACTACCTGCTGGGCAACCTGACTCTATCGGACCTGCTCGCAGGTTTCACCTACATGGTGAACATCATGACGTCCGGGGCCAAGACGTTAAAGCTGACGCCGGTGCTGTGGTTCCTGCGGGAGGGCGGCGTGTTCATCATGCTGGCCGCCTCCGTCATCAGTCTGCTGGCCATCGCCATAGAGCGCCACGTCACCATGGTGAGGATGAAGCCGTACCAGGGGGACAAACAGGGCCGGATGTTCGCACTGATCGGCGCCAGCTGGGTGCTGTCCGTGTTCCTCGGCGTCCTGCCCGTCCTCGGCTGGAACTGCATGGGCCGGCTGGACCAGTGCTCCACGGTGCTGCCGCTCTACGCCAAGAGCTACATCCTCTTCTGCATCACCGTCTTCAGCGCCATCCTCATGGCCATCGTGGTGCTCTACGTGCGCATCTTCCGCATCGTCAAGTCCAACACGCACCGCCTGGCGTCGGCCCCGCAGCGCAAGGGCCTCTACCGCAAGTCCCAGAAGTACATGGCCCTGCTGAAGACGGTCACCATCGTCCTGGGCGTCTTCATCATATGTTGGCTGCCGCTCTTCGTCCTCCTGCTGCTGGACTTCTTCAGCCCGGCCAAAAGCTGCGGGGTTCTCTTTAAAGCGGACTATTTCCTGGGCATCGCTATGCTCAACTCCCTCCTCAACCCCATCATCTACACGCTGACCAGCAAGGACATGAGGAAGGCCATCCTCAGGCTGCTCTGCCGACACTGCCTCCTGACCAAAGATGGACAAGTGAAGAAGATTGGGATGCCCTTCCTGGACTGCAGCACCAGCAGAGTCGACGCAGCCTCGCACAAACTGGAGGGAGTGGAGACGACGGTGTCCTCCGGGAACTTTACACCGTCTACGATCAAAGCCGTTTACCCCAGGATGTCTAAAACATGACACAGCGGCTCGCTGAATGACGCTGAGAGCGAGCGTTGGGACTAAGACTCGGCCGCTTCTCTCCAATCCGAGCTGTGCTCCAGGCGGCGTACGACAGGAGCGGAAGTTTTGAGTTGCACTCCGCCAGGGTTCGGTATTAAACCCTCATGAACAGAATAAGCTCCATGTATGTGATTGAAgcagggctgtcctcgactataGTCAGTCGACTAACACAGGATTTTGTCGAGTAAccaattagttgatttaatcgacagatcagagaatcatgcaaaagcacctcTTTAAATCGTGTGAtgtaccagagatgtgctcgcaagtttcttggaaatagaACATTCAAaagcattaaaaataaatgactaatcgactgaagaaatcttagtcgactaagattaaAACGACCAATCAGTCGACTAATCAACTAAGAGGGGGCAGCCCTAGAGAAGATAGAAGTACAAATTGAGACAGACATTAACTTTAAGTTTTATAGATGTTTAGTCATGACAAACAGATATGTcaattagagctgcaacgataaatcgattagttgtcaactattaaattaactgccaactattttgataatcgattggAGTCCATTTTTGAGGGGAAAAAGTCaaacttctctgattccagcttcttaaatgttaatattttctagtctcttctctcctccgtgacagcaaactgaatatctttgagttgtggacaaaacaagacatttgaggacatcatcttgggctttggcaAATACTGACGGACTTTCTGACAtcttatagaccaaacaattaatcgagaaaataatcgacagattaacagacaatgaaaatgatcgttcgttgcagccctaatgtcgATGCTTTTATTGTAGCTGTCGGTTACATTTATCTTTTAGATAGTGAAAGCAAGGCCAGTATTTGTCAGAAGAAGTCGTTTCATTTCATCAGTTTGTTTtccacatgaaataaaatcaaAGACTGTGTGCAGACGTTTCACATAAATACAGCCAGCTAGGCAGCACATCTGAGGTTTATCCTTATCTCCTCTCCCTGTGTAGCACATAATGATATGTTGTTACAAACAGAGCATCCACACCCAAAATCTGCAGCCAAACCCATTTTAATGTCTGCCATGTGAGTTTTGGTCAGCCGTAGTGCTGGGTAGAGGTCCCCATCGGCCAAGATCAGAAGCTCGGTGGCCTGGAGACGCACCGAACACGTCATACGGAGGGGCTGAGCGCAGCGGTTTGCAGCTTTGGAGGTCCCTTTAACATATGTAGCGACACATGATGGATGACTGAAAGCAATAAAAGCAGACAGTGGAGGTTTGTTGACGCCTTTTAGCTGGTGTAACAGAGTAGAATATCGCAGCGATGTGCCACAGCTTGTGGACAAAGTTCACCGTGAAATGATACAGATCTGGTTTTTCTCGTGAAAGAGCACAGATGTGACCTTGTTCCACGCAGACAGCAGTCTGTCAAAGCCCAGACTACAGAGTGTGTGGGCTTCAGAGTGCCGGGGGGAATTTCATCGTGGTTAAAGTGACATTAGAAATGGGTCCTTTGCAAACTGTAATATTGtacataaatgtaaaatgtagtatACTTTGTAAATATCTATAGTCTTTCTCTGAGCTTATCAGAACTGCATTttgtattgtaaaaaaaacatctctttaAGTTATGTCACCTTTGTATGTGCACTGAATAAAACATGTGAATGAAGttta

Function

symbol description
s1pr5 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and regulation of metabolic process. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane.

NR:

description
PREDICTED: sphingosine 1-phosphate receptor 1

GO:

id name namespace
GO:0003376 sphingosine-1-phosphate receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0038036 sphingosine-1-phosphate receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826331.1 True 3369 mRNA 0.48 2 3403000 3407242

Neighbor

gene id symbol gene type direction distance location
rtbdn rtbdn,LOC103364965 coding downstream 261290 3120685 ~ 3141710 (-)
hook2 LOC103364969 coding downstream 367988 3008089 ~ 3035012 (-)
trir csgr03h19orf43,clg4h19orf43,LOC103154935,LOC107087651,LOC103376077,LOC102224489 coding downstream 399608 2999650 ~ 3003392 (-)
LOC120574018 NA coding downstream 560187 2840433 ~ 2842813 (-)
si:ch211-106h11.3 LOC103375031 coding downstream 582679 2801382 ~ 2820321 (-)
si:dkeyp-69e1.8 NA coding upstream 110682 3517924 ~ 3527374 (-)
hmgxb4a hmgxb4,LOC102782297 coding upstream 122224 3529466 ~ 3541172 (-)
ankrd54 ankrd54 coding upstream 135782 3543024 ~ 3549032 (-)
foxred2 foxred2 coding upstream 141985 3549227 ~ 3561807 (-)
mcm5 mcm5,LOC102783740,LOC106927661 coding upstream 168295 3575537 ~ 3594256 (-)
G151399 kri1,LOC102780649 non-coding downstream 22335 3375879 ~ 3380665 (-)
G151398 NA non-coding downstream 23462 3379186 ~ 3379538 (-)
G151376 NA non-coding downstream 75633 3327144 ~ 3327367 (-)
G151375 NA non-coding downstream 80521 3322193 ~ 3322479 (-)
G151374 NA non-coding downstream 81147 3318104 ~ 3321853 (-)
G151515 NA non-coding upstream 115110 3522352 ~ 3522790 (-)
G151521 NA non-coding upstream 201914 3609156 ~ 3651267 (-)
G151561 NA non-coding upstream 556806 3964048 ~ 3964411 (-)
G151615 NA non-coding upstream 647972 4055214 ~ 4112189 (-)
G151633 NA non-coding upstream 675676 4082918 ~ 4083681 (-)
G151344 smarca4 other downstream 86085 3311727 ~ 3316915 (-)
G151227 LOC103393680 other downstream 487633 2911326 ~ 2915367 (-)
G151216 LOC106957010,LOC107376217,LOC103393680 other downstream 506657 2873918 ~ 2896343 (-)
G151146 NA other downstream 597589 2399809 ~ 2805411 (-)
farsa farsa other downstream 1241276 2132732 ~ 2161724 (-)
LOC120575464 NA other upstream 954606 4361848 ~ 4367343 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other upstream 1008935 4416177 ~ 4464991 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other upstream 1177931 4585173 ~ 4765493 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other upstream 1771074 5178316 ~ 5227241 (-)
G152114 rbx1 other upstream 2054604 5461846 ~ 5464418 (-)

Expression


Co-expression Network