G163055


Basic Information

Item Value
gene id G163055
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 3659962 ~ 3660294 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU220866
ttctgcatttatctctcgttcacactccagtccagttggtggcggtaatgcacatttaagttggtttgccaaccgccaataaactacaaagaagaagaagatactgtcggtacacgatgaCGCCCACGTTGAGTAtttagcaagctgggcagagaagctagcggcgataacaagtgcagaaatggaaaactgtttcgcatttttccgttgtgattcggccagaaacttcaacattgtgaggcgaagagatcgttttggaatataaagcttggatattacatttacTTGGACTCTtagggatttatgaaaatcaagttttggtcaaaatacgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220866 True 333 lncRNA 0.42 1 3659962 3660294

Neighbor

gene id symbol gene type direction distance location
LOC120543675 LOC100703014,LOC103354664,LOC102796844,LOC102305065,LOC101476254 coding downstream 20485 3625730 ~ 3639477 (-)
LOC120543685 LOC106675582 coding downstream 55848 3603444 ~ 3604114 (-)
LOC120543676 NA coding downstream 60230 3597711 ~ 3599732 (-)
LOC120543677 NA coding downstream 67840 3590311 ~ 3592122 (-)
trnaa-agc_20 NA coding downstream 216044 3443846 ~ 3443918 (-)
LOC120543681 NA coding upstream 3535 3663829 ~ 3664776 (-)
LOC120543683 NA coding upstream 201475 3861769 ~ 3867234 (-)
LOC120543678 NA coding upstream 208464 3868758 ~ 3885873 (-)
LOC120543692 NA coding upstream 452575 4112869 ~ 4124813 (-)
LOC120543691 NA coding upstream 467495 4127789 ~ 4137034 (-)
G163032 NA non-coding downstream 87709 3572005 ~ 3572253 (-)
G163029 NA non-coding downstream 91309 3568140 ~ 3568653 (-)
trnav-uac_20 NA non-coding downstream 118939 3540951 ~ 3541023 (-)
LOC120543686 NA non-coding downstream 121127 3525192 ~ 3538835 (-)
G163057 NA non-coding upstream 32655 3692949 ~ 3693160 (-)
G163072 NA non-coding upstream 124468 3784762 ~ 3786728 (-)
G163090 NA non-coding upstream 164176 3824470 ~ 3856548 (-)
G163267 NA non-coding upstream 233219 3893513 ~ 3893888 (-)
G163261 NA non-coding upstream 272378 3932672 ~ 3933480 (-)
LOC120544249 alg8 other downstream 426680 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other downstream 461714 3185970 ~ 3198248 (-)
LOC120543772 NA other downstream 564488 3037923 ~ 3095474 (-)
G162910 NA other downstream 830368 2827089 ~ 2829594 (-)
LOC120543939 NA other downstream 1008559 2342150 ~ 2651403 (-)
G163259 NA other upstream 210031 3870325 ~ 3874115 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other upstream 487569 4147863 ~ 4157624 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other upstream 621479 4281773 ~ 4821872 (-)
G163334 NA other upstream 642272 4302566 ~ 4304048 (-)
G163315 NA other upstream 674549 4334843 ~ 4820499 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000304_17705069_17711334 DNAJB13 coding CI01000304 null 17705033 ~ 17712467 (-)
rainbow trout (Oncorhynchus mykiss) G1701804 tmem19 non-coding NC_048585.1 CM023239.2 2509058 ~ 2511488 (-)