G170248


Basic Information

Item Value
gene id G170248
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 31531669 ~ 31535329 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU230864
ATTTGCACAAACAGAATTTATTTGGCCATATCGAAGATATATTcacaaatggaaaaacaagctTTTTCACCGTCCGTAAGTCACCGTAGAAAATACAGTAGACATATTTACAGAAATTCTTGATGACTTCAGAAAATACAGTGCCGTTTTGTGTAGCggttgcgttttttttttgtttttttttacaaacacatTAGCGACATACTAATATTACAAGCGTGGAAGCAGCTACCCTACCTACTAATAAGTCTTTTATGTCAAAAGGGCGATCAATTTTgagagtgaaaaaaaatgtctcatAAAACAAAATCAGTTCAAATATGAACAGAGCCAGAAGCTTGACCGAAGTATTTAACCGGGGGGGGTTAAAGTTTCTATGATATTACAAACTGTCTAAAGTCAGGTTGCGTTTGAGTTTTAAGAACACACCATCATAGTGGTCACATATAAAAACTATTCCTGTACAGATACTTCAGGGAAGATCAATGGTTGTTATGATACTGTAAGATTAAGGATGTGCTTCTGGACTACTATTCCCGTTTTTTTCATCATGCAACACATCACTGTGGACCTCTTAGTATACTGGTCACGGAAGGACGTCATTGACAGCGCTCCCAGGCTGCATCCCAGGGAGCTCCAGCCTCTCACACTCTGTCAGCTTCAGCGTTAGGTGCTGGGCGATGTCATTGGGTTCTGTGTACAGTGCAGCAGGAACATTCTTCAGTTCTGCTATCTGGCTTTCTCTCGTGCTGAACTCTCGTAGCATGAAGTTCTTCCCAGCCTCGTGATAC

Function

NR:

description
PREDICTED: tyrosine-protein phosphatase non-receptor type 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230864 True 791 lncRNA 0.40 3 31531669 31535329

Neighbor

gene id symbol gene type direction distance location
sim2 LOC107572951,LOC107676491,LOC106906485,LOC103129244 coding upstream 111385 31389594 ~ 31420284 (+)
usp25 usp25 coding upstream 398902 31093019 ~ 31132767 (+)
nrip1b nrip1 coding upstream 456838 31029841 ~ 31074831 (+)
gdpd5a LOC103363747 coding upstream 566836 30923733 ~ 30964833 (+)
igsf5a NA coding upstream 1073864 30431788 ~ 30457805 (+)
sptbn4a LOC104963391,LOC100709524 coding downstream 17459 31552788 ~ 31597093 (+)
ckma LOC107386319,LOC103368860,LOC103141037,LOC106948201,LOC105930111,LOC104964774 coding downstream 160803 31696132 ~ 31701593 (+)
trnas-gcu_8 NA coding downstream 267502 31802831 ~ 31802912 (+)
trnas-gcu_9 NA coding downstream 269773 31805102 ~ 31805183 (+)
trnas-gcu_10 NA coding downstream 270313 31805642 ~ 31805723 (+)
G170214 NA non-coding upstream 110004 31421308 ~ 31421665 (+)
G170173 NA non-coding upstream 205448 31325993 ~ 31326221 (+)
G170155 NA non-coding upstream 386534 31144879 ~ 31145135 (+)
G170152 NA non-coding upstream 387585 31143802 ~ 31144084 (+)
G170146 NA non-coding upstream 390773 31140433 ~ 31140896 (+)
G170266 NA non-coding downstream 83128 31618457 ~ 31689108 (+)
G170271 LOC102792934,LOC102197207,LOC102310682,LOC103368863 non-coding downstream 96215 31631544 ~ 31633040 (+)
G170282 NA non-coding downstream 135861 31671190 ~ 31674136 (+)
G170291 NA non-coding downstream 166416 31701745 ~ 31703841 (+)
G170293 NA non-coding downstream 177958 31713287 ~ 31714253 (+)
LOC120544216 NA other upstream 22253 31480312 ~ 31509416 (+)
G170156 NA other upstream 313385 31185937 ~ 31218284 (+)
pcp4a NA other upstream 1029072 30474451 ~ 30502597 (+)
G169814 NA other upstream 1402737 30128532 ~ 30128932 (+)
uvrag uvrag other upstream 1417979 30011333 ~ 30113690 (+)
micu2 micu2,LOC103399085,LOC104943497 other downstream 67185 31602514 ~ 31611713 (+)
G170284 NA other downstream 142669 31677998 ~ 31680066 (+)
G170409 NA other downstream 528838 32064167 ~ 32064730 (+)
igsf9bb LOC103357894,LOC103394972 other downstream 711599 32246928 ~ 32394530 (+)
cfap58 cfap58,LOC102788841 other downstream 866593 32401922 ~ 32424029 (+)

Expression


Co-expression Network