G170271 (LOC102792934,LOC102197207,LOC102310682,LOC103368863)


Basic Information

Item Value
gene id G170271
gene name LOC102792934,LOC102197207,LOC102310682,LOC103368863
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 31631544 ~ 31633040 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU230893
CGTGGTGATAGGATAGATGGGGTTTATGATCGTGAGCAGCAGCACATTGTTGACACTCCGGGTGTCGTCCGAGTCTCCGGGCCGGGAGATCTTTTGGCTAGTGGAGTAATTGATGAAAGCTGGGTGGCCTGCAATGTAAACTTGGTTCTCTGCTGCATATGTAACAGCATTGCAGGAGCCAATCATGTCCTCATACTCGACCAGGGCCTGGCGCTTCTTGGGCATCATAACCacaaaaCTGACGGCCCCAAACTCCTGCAGGGCCTCCACCAGGTCAGCCTCCATGATGCCGTCCACCAAGCCCCTGATGTGCACCACCGGGGAGGGTAGCGGTTTATGAGGGTCATCGTAGCCCTCCGTTGTCATTCCTCCCTCCTCGGTTTTCTGTCTTTTCGTTGCTCTGCCGCCTTCTCCGAAGTATCGGCCCgcagcagcagccatgttgTCC

Function

NR:

description
PREDICTED: heterogeneous nuclear ribonucleoprotein L-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230893 True 448 lncRNA 0.56 3 31631544 31633040

Neighbor

gene id symbol gene type direction distance location
sptbn4a LOC104963391,LOC100709524 coding upstream 34451 31552788 ~ 31597093 (+)
sim2 LOC107572951,LOC107676491,LOC106906485,LOC103129244 coding upstream 211260 31389594 ~ 31420284 (+)
usp25 usp25 coding upstream 498777 31093019 ~ 31132767 (+)
nrip1b nrip1 coding upstream 556713 31029841 ~ 31074831 (+)
gdpd5a LOC103363747 coding upstream 666711 30923733 ~ 30964833 (+)
ckma LOC107386319,LOC103368860,LOC103141037,LOC106948201,LOC105930111,LOC104964774 coding downstream 63092 31696132 ~ 31701593 (+)
trnas-gcu_8 NA coding downstream 169791 31802831 ~ 31802912 (+)
trnas-gcu_9 NA coding downstream 172062 31805102 ~ 31805183 (+)
trnas-gcu_10 NA coding downstream 172602 31805642 ~ 31805723 (+)
trnas-gcu_11 NA coding downstream 173975 31807015 ~ 31807096 (+)
G170248 NA non-coding upstream 96215 31531669 ~ 31535329 (+)
G170214 NA non-coding upstream 209879 31421308 ~ 31421665 (+)
G170173 NA non-coding upstream 305323 31325993 ~ 31326221 (+)
G170155 NA non-coding upstream 486409 31144879 ~ 31145135 (+)
G170152 NA non-coding upstream 487460 31143802 ~ 31144084 (+)
G170282 NA non-coding downstream 38150 31671190 ~ 31674136 (+)
G170291 NA non-coding downstream 68705 31701745 ~ 31703841 (+)
G170293 NA non-coding downstream 80247 31713287 ~ 31714253 (+)
G170365 capns1,LOC107700232,LOC107548486,LOC107655908 non-coding downstream 197060 31830100 ~ 31832636 (+)
G170384 h3f3b,LOC107377396,LOC101073377,LOC107550302 non-coding downstream 277872 31910912 ~ 31912412 (+)
micu2 micu2,LOC103399085,LOC104943497 other upstream 19831 31602514 ~ 31611713 (+)
LOC120544216 NA other upstream 122128 31480312 ~ 31509416 (+)
G170156 NA other upstream 413260 31185937 ~ 31218284 (+)
pcp4a NA other upstream 1128947 30474451 ~ 30502597 (+)
G169814 NA other upstream 1502612 30128532 ~ 30128932 (+)
G170284 NA other downstream 44958 31677998 ~ 31680066 (+)
G170409 NA other downstream 431127 32064167 ~ 32064730 (+)
igsf9bb LOC103357894,LOC103394972 other downstream 613888 32246928 ~ 32394530 (+)
cfap58 cfap58,LOC102788841 other downstream 768882 32401922 ~ 32424029 (+)
robo3 LOC103364814 other downstream 1079558 32712598 ~ 32815543 (+)

Expression


Co-expression Network