G170513


Basic Information

Item Value
gene id G170513
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 32390413 ~ 32391086 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU231167
GCACCTTTTGAGCAAAACaggaaaatcaaaaaaaaaaaaaaaaaaaacagcaacaaaactgTTACAGTACACACCCATCCTTTGTTGAACCTAAAATATGATTGAGCTGCAGCATGTGTAATGTGTGATATAGTTGAGTTTCAGATGTTATGGCACTTCCTTTACTTATCcaataaaaaactaattttagcCCCTTAGTGTCTACATTTCCATGTCACTTAGACAGGCAAATGTAATATCAATCACTGGAATCTTTCAAAGTAAAACTGGGCCACATGTTAACAAAAGTGTAGCATACAACAAAAACTTttggctctctgtgtgttgccttcAATGCCACTTACTATTTCCTTCAGGGATGACTGTACTCTCAGCGTTTCCATTTGAAATGACAAGCACATAAAGAGACAAAATACAAAGAGGCAGGTAattacacatgcacgcacacataaaaaaaaaacataaatatataaataaaaattagaCGTGAGTCAGGCAACCGACCAGAAGCTTCATTAAGGCCAAACAAAGCCATTGTTTTTTATGCCCTCTAAAATCTATGAAGAAAATACTATAATATACTATGTCACAAAATCTTATCCTCCACTATGTATGGATGGTTacttttttaattgattttctttttggcATAACTATAGTTCTTAGGATTTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231167 True 674 lncRNA 0.34 1 32390413 32391086

Neighbor

gene id symbol gene type direction distance location
LOC120544316 LOC102214061,LOC102298006,LOC103357892,LOC101063296 coding downstream 246326 32099217 ~ 32144087 (-)
vps26bl LOC104931657,LOC103357891,LOC100706835,LOC101482660 coding downstream 299972 32078976 ~ 32090441 (-)
LOC120543954 arhgap32 coding downstream 325703 31970880 ~ 32064710 (-)
arhgap32b arhgap32 coding downstream 422771 31917787 ~ 31967642 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC107388308,LOC107572204,LOC105909691 coding downstream 476962 31909425 ~ 31913451 (-)
esama LOC103364812,LOC104951165 coding upstream 101974 32493060 ~ 32567042 (-)
LOC120544484 msantd2 coding upstream 187011 32578097 ~ 32589328 (-)
robo4 NA coding upstream 438229 32829315 ~ 32868069 (-)
tmem218 tmem218 coding upstream 485202 32876288 ~ 32884667 (-)
LOC120543965 NA coding upstream 994328 33385414 ~ 33388408 (-)
G170512 NA non-coding downstream 425 32389717 ~ 32389988 (-)
G170465 NA non-coding downstream 164621 32225250 ~ 32225792 (-)
G170451 NA non-coding downstream 229551 32160648 ~ 32160862 (-)
G170433 NA non-coding downstream 311940 32075395 ~ 32078473 (-)
G170446 NA non-coding downstream 368682 32021347 ~ 32021731 (-)
G170517 NA non-coding upstream 3562 32394648 ~ 32394980 (-)
G170518 NA non-coding upstream 3903 32394989 ~ 32396512 (-)
G170519 NA non-coding upstream 5478 32396564 ~ 32399899 (-)
G170520 cfap58,LOC102788841 non-coding upstream 12128 32403214 ~ 32403448 (-)
G170521 NA non-coding upstream 14255 32405341 ~ 32405622 (-)
G170463 NA other downstream 188207 32201709 ~ 32202206 (-)
G170098 NA other downstream 1431915 30957501 ~ 30958498 (-)
LOC120543892 LOC103394800 other downstream 1539359 30846998 ~ 30851054 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other downstream 1560104 30737565 ~ 30830309 (-)
LOC120575604 NA other downstream 1658331 30718215 ~ 30732082 (-)
LOC120543978 fez1 other upstream 52200 32443286 ~ 32491305 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other upstream 1177535 33568621 ~ 34100246 (-)
G170802 zgc:194989,hist2h2l,LOC107719244,LOC108277172,LOC103356012,LOC107574861,LOC108179079 other upstream 1917908 34308994 ~ 34309714 (-)
cblb cblb other upstream 2532287 34923373 ~ 35016119 (-)
LOC120575651 LOC105011014,LOC103356025,LOC103395028,LOC106603763 other upstream 3715728 36106814 ~ 36246233 (-)

Expression


Co-expression Network