tmem218 (tmem218)


Basic Information

Item Value
gene id tmem218
gene name tmem218
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 32876288 ~ 32884667 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826459.1
AACCAATCAAACTCCAGTTTGCTGTTACCAGGAAGCAGAAGACGCGATACTGAAATATATCCTATGAACTGAATGCTACTTGAGAAAGACGGGTTAATGGACAGCAAAGATTCATGTTTACGGGGGAATGTGCTTGTTGAACATCAACATAAGTTACATGTCACTTAGCATGCAACTGTCGTGGTCTCAGCATAGCAGAGCTTACGTTAGCAGTGACAGCTACCATTACCGTGGAAGTTCCAGTAGGCTAATgtaggcagctagctagcttatataacctagctagctaggttaacTTGttaaagctaacgttacagcaTTGCTTAGCAATGTTACGAACGTCGGTCCTAAAATCATATTTCACCCACTTTATCGATTAACTGTTCTGTCTGTCCGGTAAACTAACGTTACTTTGAAACGTTGCTTATCAAAATGGCAAGCACCGTGGTGGGAGTGGGTACGGGTGTTTTCGTTATAGCCATCGTTTGGATTGCAGCTCTTGTGTTTGGGATGATGCTGCTGAGAGCGTCTGGATCTGCAAAGTTAGGCGTTATCCCCGTTGGGTTTCTGGCTCTCACCATCACTTTGGTGCTGGTGTTTTTCCCTCGCAGCCCAGAAACAACTCCCCCCTTCAAAGAGATAGAGATAGTGGACACTTTGTTCATCGGCCGCTATATACTGCTGGCAGGGGCGGGTGCAGTCTTTCTAGTGCTGTTCTTCATGCTGctcccctttcatttcctgGAGCCAGTGCATGCCAAGGCCTTAAGAACACACTAGAGCTGCCAGGGTCGGAGCTGGCAGAGGGATCACACCGCTGATGGGACGCAACTTACGACAAGCAGGGCTGAGCGGAGAGCCCCCACACAGAATGCATCCCAAACAGAAACAGCAGGAGAGCCCGTGCCAGTGTTTTCTTCATAACTGTGcttgttgactgtgtgtgtgtgtgtgtgtacaaccaACAGAAAGGAGATATCAAACAGTACCCCagattgttgtatttgtattgttgtattgtatgttatttatgtcttagtcgactaagatttctttagctGATTAggcattttttatgcttttttttcccatgctgaatgacttatttcaaggCTTTTAATGACTTTAAACAAGAtctaaagtggt

Function

symbol description
tmem218 Predicted to be located in cilium and membrane. Predicted to be integral component of membrane. Orthologous to human TMEM218 (transmembrane protein 218).

NR:

description
transmembrane protein 218

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826459.1 True 1146 mRNA 0.45 3 32876288 32884667

Neighbor

gene id symbol gene type direction distance location
robo4 NA coding downstream 8219 32829315 ~ 32868069 (-)
LOC120544484 msantd2 coding downstream 286960 32578097 ~ 32589328 (-)
esama LOC103364812,LOC104951165 coding downstream 309246 32493060 ~ 32567042 (-)
LOC120544316 LOC102214061,LOC102298006,LOC103357892,LOC101063296 coding downstream 732201 32099217 ~ 32144087 (-)
vps26bl LOC104931657,LOC103357891,LOC100706835,LOC101482660 coding downstream 785847 32078976 ~ 32090441 (-)
LOC120543965 NA coding upstream 500747 33385414 ~ 33388408 (-)
jhy NA coding upstream 1351238 34235905 ~ 34277162 (-)
hspa8 hspa8,LOC103356016,LOC102792298,LOC105921217 coding upstream 1393504 34278171 ~ 34282577 (-)
LOC120544758 NA coding upstream 1394635 34279302 ~ 34279394 (-)
LOC120544757 NA coding upstream 1396258 34280925 ~ 34281017 (-)
G170523 NA non-coding downstream 460087 32410272 ~ 32416201 (-)
G170521 NA non-coding downstream 470666 32405341 ~ 32405622 (-)
G170520 cfap58,LOC102788841 non-coding downstream 472840 32403214 ~ 32403448 (-)
G170519 NA non-coding downstream 476389 32396564 ~ 32399899 (-)
G170518 NA non-coding downstream 479776 32394989 ~ 32396512 (-)
LOC120544610 NA non-coding upstream 21691 32906358 ~ 32908784 (-)
G170626 NA non-coding upstream 176815 33061482 ~ 33061700 (-)
G170627 NA non-coding upstream 208361 33093028 ~ 33093318 (-)
G170673 NA non-coding upstream 616613 33501280 ~ 33505814 (-)
G170678 NA non-coding upstream 667553 33552220 ~ 33552511 (-)
LOC120543978 fez1 other downstream 384983 32443286 ~ 32491305 (-)
G170463 NA other downstream 674082 32201709 ~ 32202206 (-)
G170098 NA other downstream 1917790 30957501 ~ 30958498 (-)
LOC120543892 LOC103394800 other downstream 2025234 30846998 ~ 30851054 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other downstream 2045979 30737565 ~ 30830309 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other upstream 683954 33568621 ~ 34100246 (-)
G170802 zgc:194989,hist2h2l,LOC107719244,LOC108277172,LOC103356012,LOC107574861,LOC108179079 other upstream 1424327 34308994 ~ 34309714 (-)
cblb cblb other upstream 2038706 34923373 ~ 35016119 (-)
LOC120575651 LOC105011014,LOC103356025,LOC103395028,LOC106603763 other upstream 3222147 36106814 ~ 36246233 (-)
LOC120575647 kirrel3,LOC106567547,LOC105011011 other upstream 3532256 36416923 ~ 36780232 (-)

Expression


Co-expression Network