G170673


Basic Information

Item Value
gene id G170673
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 33501280 ~ 33505814 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU231358
gatgaatgtagtggagtaactaaagtaactagtaactaaagctgtaccagatgaatgtagtggagtaactaaagtaactagtaactaaagctgtaacagatgaatgtagtggagtaactaaagtaactagtaactaaagctgtaacagatgaatgtagtggagtaactaaagtaactagtaactaaagctgtaacagatgaatgtagtggagtaaaaagtacaatatttctctctgaaatgtagcagagtagaagtagaaagtggcatgaaaagaaaaagattcaagtaaagtaaagtacctcaacatttgtaattaagtacagtacttgagtaaatgtacttagttacattccaccactgactacCACACTGATAAGTTAACAACAGTAAAGGCAGACGTGTTGTTTGAATAACGCAAATTCAGAGTCCCCAGTGGCGGAAGAagtttttatattgtttatttaagtaTAAAGTAATTATACCACCTGGGGaaatactccactacaagttaaagtcctgcatacttaggtaaaagtatttaagtattatcagcaaaatgtacttaaagttcTTAAAGTGAAAGTCTGtgtagtgcagtaaaatgttctctgtctgtgttttactGCTGATGGTTGAACTCCTTCATGtactgttggctagtttcatctGCAGCAATGCATCCTATGTTTGTAGCGTTAACGTGCCGtgttgtgtttgctgtttttgcTGCGTCCTTTCCGTTTTGTAACCCTCTGTCACCATTGAGGGTTTTCTGTTCTagttgtttcctgttttattttgtagtctgttttTCCCCCCCAGTGTCAtgtcctgccttgtgttttcccgcctctgtgattgtctgcccctccctgatgtgtttcacctgttcctgagccCTCGTGTCACCTGTCCCGTTTCCCcctcgttaccttgtgtatttagtctctgtgtcacatagacttgtcatagtaggaaaagcacagctgaaattgataaccttaacaattgctcaattccatcaagtgtcccagtaatgctgcgttcatgccacctgggaataacagggaccgcccccgtggttacgttgtttttccgactggcagcgttcacatggtcgggatgcgtgttcttcttcttctgttatattggcgtttggcataacaacttgttgcatgactgccaccaacggttggccgtagccgagagcatcaggtgtgtgaaaacatggccgaaataacaaaaagatttgctgctgttttcttatgcgagcaaccaaacagcacatcgccaggtgtttgtgttatctgcaggacaacgaaacgggaaaggacacggataatgtgttgtttttttatacatgggccttctttatgaataatttgaaacaccttatgtctgtgcatgtttcttggcagaggcatttgtccacaataaacagtttattgtcattgaaatatgttcagtgaaccaaagtcgcctccatcaaatgtcagctgtcaacaacgcgtcaccaactgggaaactcggttagcaaaatccagccccagtttcccacctctgattatcacaggaagtgacgtgaatgGTGACATTGTCACTAATTTTTCCGATGTCTATGAACGCAgcgtaagctatttcagtgagtcagcatgcacaataccagggtctctcctaagtggaatgcagccatcattaatgggtttgtatacacctgtgcttttcctactatgacatgtcaacatgtctgccgtgaaaaaggtctattgtgcTTGTGTATTGCTACCCCGGTTGTCTCGGTGTTCCAGTTTATTTTGATTCCTGGTCTTTTGGCTTCCTCAACATTTCTTGGAACAATTTTTGCCTGCTTACTTCCGGACTCTTTTTGTTGTAACTCCCACAGCTGAAGCTGGTCAGCAATAATCAGGGGGGGCCGCGCGTGTTAAGTAGCTGTGCCGAGCCAGTCTGTTGGAGGGACTTTTGCTGGAAGGCCGTGTGAACAGTGACAGAGAGAGCTTCAATGGAAGCCAGAGATCCTGCATTCCAGCAGTCGCTTGCTTGTGTTAACCATTTAACGTTGCCTAATATTATTCATCTTCCTTTTGAAGATCGTTCTATGTTGACAATCAGTTTAAGAATAAATCATTTTATGTAATCTTGAACTGCTTCCGCTTTTCCCTTGGTTTCCCCTGGGTTTAGTTAATTGTTTTGTCCTAACCACCCCTAgacactgtgtgtttgtttcccaTTTACAGAGCCAGAACTGTGTATGAACACAGGATTTATTTccagtgcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaacagacagaacCGGTTAGCGCACCGGGAGGAGATATTGACTGAATTTGGCAAATGTGTATTAGATTAGAATCCCAGACTCCACCTTTTTATTACAGCATGagattaaatgtacttagttacattccaccactgccagtTACTGTATAGACACAAATTCAAACTATCCAAAGCTCTGGTATGCTTTTAGTAAATAAGATCCCAGTCTGGCATTGTCCTGTACGTAGCTCTGTCTGCTGTTATTAATTGATGGTAAATGCTTTGTGACTGCATGCATTTTCAGCGATATTTAGGATTTTAAGAGATATTTTGAGGGATTATAACTCATTGTTAAGCTACTATTTTCCAATGCACATCAATGgaaaaaataacaaacacatGATTTGTGTAAAGAGAGCCACTGTGGCTGTCTGAGAAACTTAAAGGCTATTGATTAAATCAAAATGTTTGTATTTCTACACATTTTTCAACTTGATAACTTCGGCATGAATCATAACATATTCAGCTTTAAAAGAAGacgttaaagctatagtgcgtggtgtctgtctcccccatgaggaattctaagtcaAAACTGTTGTTGCGTCCAAATGATAaaagccttccgtgattgcgCGCCTGGTCCGCTTCgacgaggagtaaacctccatatatgggcgcccgctctaccaactgagctatccgggcgcccaatttgtgccttttctgcatcaagttatggtacaaatgtctttgtttatgtaaaggaaatcaTAATAAGCTTTTGgggtgggttgcactggccagttttgattattaggGGGTTGTAAATCACGCCTAGGggcgatggcttgaatgtaacggacgttcattatttAGTTACGCACTGAAGCTTCAAAAGCCAATCATATCCTCAGGAGGTTGTGGGTAATGAAAATGTAGTTTAATGAATGAACAGCAGCAGTTAGTGAGGAGTCATTGCGGTGCCATGATGACATCAGCACAACCTGTGCCTCAACTCTCACTGTCGAGAACGGAGCAGCACACTGAGCAACACCTCTGTCCTAAATGACGCTGCGCATAAACGTCTGACCGTCCCGTTTCAGATTTTCAGCGGTCAGTGAACGTGCCGTGAAGCTGCTATGACGCTGTGATTCGGTGTTTTAAAAGTCATCTGATGACCGTatgcatttggaaaaaaaaaaacaacagtgcaGGAATTGTctgtacacatatatatatgtacattttcTACACACACTAGGATGGAAATAAAAATTTGGATGCACTATGCTGTAGGACTTTGCCTGAGAAATCACGGTGTACTATTTGTTATTCTGAACTGTTTATCATGAAGGATCCGTTACTCTGTTTTGCATACAactgtaaaaatacagtaaaattcAACAATCACAttgcattttgtcatttttttgtcgtttacttAAAAAAGCTTAATGGTATTGTACAGATATTGAACAGTACATGAcacaataatattaataataatctgaatgtACACTTCAATATTGGGCAATAAACAGTCAACTATCAACAGTTAcatgtatttttcttcttttttttcccttttcacaTACAAAAAAGGtttgggtgggggagggggggacacAAACTCATCAAATTAGTGCATGATTCAAATTTTTCCCTTCCTCGGATTGACGCCTCTCACGCTTTGCGAGCCAACAGAGAACAGACTCTGATGCAAAgccagaaaagagaaagaaggaaaactAAGGGTGAACCGCTGGCACTCTTAACTTTCCGTTCTTCTCATTGGACTGATAGTCTGTTCTTGCTGCTCAACACCGAGAGAAGCTTGAAGGCGGTCACGTTTTCCCATCAGAACTTCAGCAGGTAGAGTAAGGTTTCAGTCAGCAGGAGGCACGCGGAGAAACGGGGCAACACGGCGGCCCCGTTCACGTCATGCATGGCCCCGGGCCCTGCAGGAGAAGGATACAATACTTACTCCATCCACAGCTTTAGTCTTACAGTCCAAATCAGTATCAACAGCTATCAACTGGAATTCTAATGGGA

Function

GO: NA

KEGG:

id description
ko04514 Cell adhesion molecules
ko04970 Salivary secretion

RNA

RNA id representative length rna type GC content exon number start site end site
TU231358 True 4421 lncRNA 0.42 2 33501280 33505814

Neighbor

gene id symbol gene type direction distance location
LOC120543965 NA coding downstream 112872 33385414 ~ 33388408 (-)
tmem218 tmem218 coding downstream 616613 32876288 ~ 32884667 (-)
robo4 NA coding downstream 633211 32829315 ~ 32868069 (-)
LOC120544484 msantd2 coding downstream 911952 32578097 ~ 32589328 (-)
esama LOC103364812,LOC104951165 coding downstream 934238 32493060 ~ 32567042 (-)
jhy NA coding upstream 730091 34235905 ~ 34277162 (-)
hspa8 hspa8,LOC103356016,LOC102792298,LOC105921217 coding upstream 772357 34278171 ~ 34282577 (-)
LOC120544758 NA coding upstream 773488 34279302 ~ 34279394 (-)
LOC120544757 NA coding upstream 775111 34280925 ~ 34281017 (-)
LOC120543837 NA coding upstream 778747 34284561 ~ 34300129 (-)
G170627 NA non-coding downstream 407962 33093028 ~ 33093318 (-)
G170626 NA non-coding downstream 439580 33061482 ~ 33061700 (-)
G170585 NA non-coding downstream 487468 32583369 ~ 33013812 (-)
LOC120544610 NA non-coding downstream 592496 32906358 ~ 32908784 (-)
G170523 NA non-coding downstream 1085079 32410272 ~ 32416201 (-)
G170678 NA non-coding upstream 46406 33552220 ~ 33552511 (-)
G170679 NA non-coding upstream 46905 33552719 ~ 33553032 (-)
G170696 NA non-coding upstream 601700 34107514 ~ 34107803 (-)
LOC120543853 NA non-coding upstream 632106 34137920 ~ 34139893 (-)
G170709 LOC104955000,LOC104935109,LOC101063545 non-coding upstream 714838 34220652 ~ 34223226 (-)
LOC120543978 fez1 other downstream 1009975 32443286 ~ 32491305 (-)
G170463 NA other downstream 1299074 32201709 ~ 32202206 (-)
G170098 NA other downstream 2542782 30957501 ~ 30958498 (-)
LOC120543892 LOC103394800 other downstream 2650226 30846998 ~ 30851054 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other downstream 2670971 30737565 ~ 30830309 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other upstream 62807 33568621 ~ 34100246 (-)
G170802 zgc:194989,hist2h2l,LOC107719244,LOC108277172,LOC103356012,LOC107574861,LOC108179079 other upstream 803180 34308994 ~ 34309714 (-)
cblb cblb other upstream 1417559 34923373 ~ 35016119 (-)
LOC120575651 LOC105011014,LOC103356025,LOC103395028,LOC106603763 other upstream 2601000 36106814 ~ 36246233 (-)
LOC120575647 kirrel3,LOC106567547,LOC105011011 other upstream 2911109 36416923 ~ 36780232 (-)

Expression


Co-expression Network