G171171


Basic Information

Item Value
gene id G171171
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 35973248 ~ 35976436 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU232017
AGTAATACAACAGCATTATGGGACAACTAAGGCTAGTCCAACTAGTTATTTTAAACTCTTGTTAATGTACTGAATCTGtatttaaactagggctgtcaaaataatGTGGTGACCTCTaactcacccagtaagagcgtgcgccccatgaaggctgaggcctttgcagtggcccgggttcaaatccgacctgtggcACTCTCTGCGTGTCATCCCGCATCTCtttcccacctttcctgtctatccactgaaataaagaggaaaaaagcccccaaatatatatatatatatatatatacactgatTAATGGTGCTCTGAGACATGCTTTGATGCAGTGTGTAAAAATGATGGAGGCAGATGAGAAAACGTAGCTCTCCTACTGAATGGACTATTTACATCCAAAAAGGCCCCGATGGAACCGTGGATAGGAGCACTGTTCTTTGCAGTTTGTGCAGCAAAGGAATTTTCGTACCATCGGAGTAATTCAAGCTAGAAGTAATGAATTAATAAGCTCGGAGGTCAGCTCAGCCACTGATGCTAATGGTAGCATTAGCAAAGTTCAGACAAAACTTAATTCCTATTCCTCACATACAGTAATACAGACAGTACAACGTAATAAAATTCAATAACTTGACATAACTTTGCGTCCTCCAACACAACGTATAAGACGGCATCCAGAAGCACAATCAGGTCTAAAACTCAGAAAAGACTGCAAAAGCTGATGTATTGGCGAAGGTTGAAAATATTGTAAGTAAgaaagtaaagtttatttatatagcacttttcacagataaaaatcacagtgCTGTGGCTGGTTAGCTTAGTTGGTAGAGCACTATGTAGAGTTTTATTTCTcaatgcagaaggtccagggttcaaatctgatcCGTGATggttttcctgcgtgtcttccccctctctctccccttaggACAGCTCATGTCTGAGCTGTCCTATCATTAAAGGGGACCACTAACTACATCTGACCTGCTGACGCCAGACACCGGGAAGAAGTGTGACGCTGTATCAGGTCAGACATATAAGAAGGAGCTTGTACGTGCAAGGCTCTAAAAGTAAGGACcagaattttaaaatgaattctaAAAcgaactggtaaccagtgaagtaATTCCAAAACAGGCGTGATGTGGCGCTCTTTTGCTTGTGTGAGTTGAAAGCCTCGCAGCAGACGGAAAAGCTCTTTTCTGTTCAAACGTGTAAAAAGACTGTTACAATAATCTAAACGAGacaagataaaagcatggatgaTCATTTCCAATTCAACCTTCGACACCAAAGTTGAGAGTTTTGATCTGTTCCTCAGTCGAAAGTAGCAGTTTCTAATGAACTGTTTGGAATGATGCTCCAAGGACATTgcagaatcaaaaacaacacctaAATTCCTTAGGCTCGGTTGGACAGACGGGCCTAAAGCACCAATATGCTGCTTAATCAACGGGATGCTACTTTCTGGGGCGATAATTACTGTTTCCGTCTTATCTGGGTTCAGCAGCAATTAGTTGTCACTTAACCACCGCTTGATGCTAGTCAAGCAATTTATCAACGACGACAGTTTATAGAGCTTAGTAGCCATAACACATCAGGCTTTTTCACTGGTCAATTTTTAGATTTTGGGCTATTTGTCTtcaataacatgtcttctttcatacttgtggtgaaaaaaagtccaaaatacACATGTAGGTCTtcattttactacactttgtctagTTGCGtcggtagatttctcctaaattcaacaaaagttggtGTTCTAAATCATCCCGCTGCTCCGTAATCGCTGTCTGTACCCTGTCATCACAcataccgttggaaagctctctctctcttgtgtaaTGTTgtcggatccaaatatggtcatttcctttttataaGCAACCAATCCAGAAAGTACAATGGGGTATTTAACTCTAAATGTGAAATCTCATTGGCTTATCTcaatttctgacaacgtgattcgTTAAGATTTGTCACGTGACATACTCTGACATTTCCGCAGGAgttaaaaatgttgaaagagTGATTTgaagaggtttactcctcgacgcagcggccacaggtttgactccaacctgtggccctttgctgcatgtcattcccccctctctctcccctttcatgtcttcatctgtcctgtggaattaaaggcctaaaatgcccaggCCTAAATTGTTTGTACGTAAACTGCCATTCAGAAAACAGTAGTGttcagacagcggaggtaatGAGAGCGCCACCCAGCAGTGGCTGATAGTTCAGGTAGcgtgtctgaatgaactgatcGGTGGTTTAATTTGTCCTAATTGCGCAGGGACAGGGCTTAAAGTTAACAATGATCCGAAGAATCATGGGTTCTGTAGTAGTTTACTACTAGAGTGCAGTCTTTGCAAAGAAGATACGTACAGGCAAAGTGTCTACACATCCACGTGTCTTCAAGACGATGCAGTGTTTGATGTGAATGTGCGAATGGTGCTGTTAGCGCACGAGTTAGGCTTAGGATATGCAGCTCTCAAAAAAATCTGCAAAGTGTTGGGGATTCCTGGCCTTCATGTTAAAACGTATCAGAGACACCAAAGGACAGTAACAGGTATGGAaacactctctctttctgtctctgtcccctctcctaggagaacttccagcttcttttctggtgttaacattgggaagttttatttttttggctatttttccaaggtgtaaatctcttagtgttgggtgaccatattttgatttccaaaaaagaggacactcaGCCCTGCCTTGAGACAAATCCGACAGGCTTCTCAaaggttaatgaacatgctttattatgcctcaatggtgcaaaaataacttctgtaataaaataaaatgtgtaacaacctgtaacaaaataatagctctctttttaaataaataaatgaataatatgaaa

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU232017 True 2936 lncRNA 0.41 2 35973248 35976436

Neighbor

gene id symbol gene type direction distance location
LOC120575655 NA coding upstream 1455 35968403 ~ 35971793 (+)
LOC120543618 NA coding upstream 195623 35775979 ~ 35777625 (+)
LOC120543616 NA coding upstream 270164 35700064 ~ 35703084 (+)
LOC120575650 NA coding upstream 304776 35659716 ~ 35668472 (+)
trnaw-cca_23 NA coding upstream 348636 35624541 ~ 35624612 (+)
LOC120575649 NA coding downstream 340407 36316843 ~ 36325638 (+)
LOC120543623 NA coding downstream 427978 36404414 ~ 36406390 (+)
LOC120575584 NA coding downstream 1211373 37187809 ~ 37223409 (+)
LOC120543587 NA coding downstream 1702165 37678601 ~ 37695632 (+)
LOC120543545 NA coding downstream 1720580 37697016 ~ 37697394 (+)
G171121 NA non-coding upstream 251904 35721136 ~ 35721344 (+)
G171088 NA non-coding upstream 362068 35610898 ~ 35611180 (+)
LOC120575670 NA non-coding upstream 413982 35558376 ~ 35559266 (+)
LOC120575663 NA non-coding upstream 439187 35529788 ~ 35534061 (+)
G171049 NA non-coding upstream 470772 35494684 ~ 35502476 (+)
G171174 NA non-coding downstream 11208 35987644 ~ 35990193 (+)
G171177 NA non-coding downstream 32997 36009433 ~ 36011192 (+)
G171194 NA non-coding downstream 103257 36079693 ~ 36079947 (+)
G171199 NA non-coding downstream 113781 36090217 ~ 36090515 (+)
G171200 NA non-coding downstream 114139 36090575 ~ 36090808 (+)
LOC120575668 NA other upstream 648996 35322260 ~ 35324252 (+)
LOC120575607 NA other upstream 885351 35083889 ~ 35087897 (+)
G170896 NA other upstream 932877 35039942 ~ 35040371 (+)
G170775 dlg2 other upstream 1531098 34436960 ~ 34442150 (+)
G170735 hyou1 other upstream 1636900 34332414 ~ 34336348 (+)
G171409 NA other downstream 1285480 37261916 ~ 37262336 (+)
G171468 NA other downstream 1567164 37543600 ~ 37669599 (+)
G171483 NA other downstream 1629594 37606030 ~ 37616661 (+)
G171572 NA other downstream 1728247 37704683 ~ 37707766 (+)

Expression


Co-expression Network