si:ch211-266i6.3


Basic Information

Item Value
gene id si:ch211-266i6.3
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30262106 ~ 30266358 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777456.1
CAATCGCAGCACAGCAGCACCAAGTCAAATCGAATATTTTGGAGTGAGGCTCAAGCTTCCAGAGAGTTGTTACTGGTGCTGCTTCGGGTCGGATAAGCTTTCTCCTCTCGCTGTAACCTCACTGTCTATGGTTGGGACATAAAAGAAAGACCACAAAAATCTTCATTGATTTAACCTGGCCGAGGCTTCAAAATGGACAATGTCGCAGTTTCAAGACGAAACCACAATAAAgGAAACAAGGAAAATGCCCAGCCTGCATATGGCAGTAAGTCCTTAATGAGAAGAGAGAAAACGTCATTTACTCCCTTCCAACTGGCAAGTAACACAAAAGAGCAAACAGTGGCAAAAACCAGCTCAATTAAAGCCAAGGTGGACACATGGTCGACGTCTGGCGAAGCTCTGAAAAAGGCAAAGACCGTACAGAAGGATAGGAAAGGAGCTGCTGCCGGCACTGATGTCAAGCTACGACAAACCCATAGCCGGTGCTTCCTCACGGAACCTGCTGTGAAACCCAAGAAAACTGCTGCAGAAGCTCCAAAGCCACCGGCTGCTGCGCCGTCCTCAAAACCTGCTCTTGGCATGTACAAAGGCAAGATTGTCCAGTCCAAAATAGGATCCATGTGGAAGTCAACTGCCACCGTGGGCGGGGCAGATGCCAAGCCGCCAGCACCCAAAGCGCAGGTCCAAAGGGTTGGAAACGTGACTAAACGCAGGTCCATCTCCGTTTCTGACCTGCCTGTGCATGTCGCACAAAAACCCGCGTCGACGAGGACCAAGTCGGTGTCGGATGAACCTGCTCAGGCGCCCAAGCCTCCTGCCGCCAGCCGTCCTCGCGCTGGGTTGTACAGCGCTCTCCCTGCTGCCAGAACCTTCCCGGCAACACTAGCCGGTGCCAGCTCCAGAAACGCCAAAGTTGCTCCCGCCAAGGGAAGTGGGACTCAGAGCGCAACGCCAAAGATTCCAGGGGCCAACAAGAAGGTCAACAAACCTCCTGTGTCAAACGCCCTCAGTCAGTACAGATACACCATGGAGACTGCCGaggaaaaaaggtaaaaaaattaaaggtcccatggcatgaaaGTTAAAAAACCGGAAGCTGATCCCGACCCACAGTCCACGTCTTGTGTTGAACCTCAGCCGGCTGCACAGTGCGAACCTGAACCCGAACCCGGACTGGAAGCGCACAATCCAGGCCCTGCCACTGCTGCTCACTGTTCCGGGTTAACACCCAGCCAAACTCCAGTGATCATGAACACCACGCTGGACCAGCTGGAAAACTCTGATGCCGATCTGCCTGTTGACACACAGGACGGAATCGATGATGTTGTGGTGAACCTGTGTGCTGCTTTGGATGCCTTTCCATATGAGGACGAGCTTCCACAGGTGACGGATGTGTGCAATAATGTTGAAATGGAGGACGGCAAACAGAAGGATGAATGTAAAACAGAGGAGTGGAAGGAGGAGGAAATGCGCGGGAAGGAGGGCGAGAAGCCAAAGGTTGAGCAAGTGAAGGATGGAGTAGAAGAAAGTAGTGACCAGAAAGTGGAGACGGATGAGGAAGTAgaaagtgatgatgatgatgatgttgtgaTGGAGACCGTGCCACAGATGGAGGATGCTTCAGTAATAAAGTACAGTGTGAAGACTACTCCGTACCTGCAAAGTGTGAAGAAGGCAATTGAAGACGAGGCCAGCACAAGTACGTCCAGAAAAAAGAGCAACATCAAAGATGTGAAGTTTCTGACCCCAGTGCGCCGTTCCTGCCGCATCGAGCGCACGTCGTCCCGCCTGCCGGCGATGCTGGCCGATCACGACCCCTGTGTGTCCTCGCTGGCTGAGCTGGTGCAGCTGGATGACGGCAACGCCGCCAACGCCTACATCTACAGAAAAAACCACGCACTGCTGGAAGATCTGCCAGATCAGCCCAGACTGTGAGGAGCTCTGTAAATGTGCAgtttaaaataatatacaaaatgGACACTATGTACTGACACTTTTTAGAATGTTTTAATAATCTCATTTGAATGTGTCCGATCAATGAATTATTGctgttatattttaaaatattatcacttaacactattttattttaatattgacaATATTGCCAAATGCACTGCAATAAAGAATTATTAACTCAT

Function

NR:

description
PREDICTED: cytoskeleton-associated protein 2-like

GO: NA

KEGG:

id description
K16769 CKAP2; cytoskeleton-associated protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777456.1 True 2141 mRNA 0.50 7 30262106 30266358

Neighbor

gene id symbol gene type direction distance location
dgat2 dgat2 coding upstream 252524 29994769 ~ 30009582 (+)
mogat2 mogat2 coding upstream 273739 29972641 ~ 29988367 (+)
umodl1 NA coding upstream 321012 29915409 ~ 29941094 (+)
atg101 atg101 coding upstream 358440 29902201 ~ 29903666 (+)
auts2a auts2 coding upstream 578617 29317542 ~ 29683489 (+)
LOC120543994 LOC103357896,LOC100709839,LOC102310645 coding downstream 28147 30294505 ~ 30309393 (+)
slc37a4b LOC103394812,LOC103476137,LOC106951585,LOC106926292,LOC103129769 coding downstream 125870 30392228 ~ 30407729 (+)
igsf5a NA coding downstream 165430 30431788 ~ 30457805 (+)
gdpd5a LOC103363747 coding downstream 657375 30923733 ~ 30964833 (+)
nrip1b nrip1 coding downstream 763483 31029841 ~ 31074831 (+)
G169840 wnt11,LOC105418209 non-coding upstream 36479 30222508 ~ 30225627 (+)
G169833 NA non-coding upstream 57687 30202462 ~ 30204419 (+)
G169820 NA non-coding upstream 121692 30140184 ~ 30140414 (+)
G169694 NA non-coding upstream 956614 29305278 ~ 29305492 (+)
G169606 NA non-coding upstream 1092379 29149875 ~ 29169727 (+)
G169855 stt3a non-coding downstream 3822 30270180 ~ 30275164 (+)
G169929 NA non-coding downstream 123023 30389381 ~ 30389631 (+)
G169930 NA non-coding downstream 144809 30411167 ~ 30418143 (+)
LOC120544704 NA non-coding downstream 162380 30428738 ~ 30431487 (+)
G169964 LOC107386033,LOC105928111,LOC103476139 non-coding downstream 248031 30514389 ~ 30517602 (+)
G169814 NA other upstream 133174 30128532 ~ 30128932 (+)
uvrag uvrag other upstream 148416 30011333 ~ 30113690 (+)
G169789 map6 other upstream 290999 29945874 ~ 29971107 (+)
LOC120544198 vmp1 other upstream 1319774 28881734 ~ 28942332 (+)
ftr82 LOC104966639,LOC103359483,LOC104933521,LOC108233798,LOC106511051 other upstream 1459221 28796512 ~ 28802885 (+)
pcp4a NA other downstream 208093 30474451 ~ 30502597 (+)
G170156 NA other downstream 919579 31185937 ~ 31218284 (+)
LOC120544216 NA other downstream 1213954 31480312 ~ 31509416 (+)
micu2 micu2,LOC103399085,LOC104943497 other downstream 1336156 31602514 ~ 31611713 (+)
G170284 NA other downstream 1411640 31677998 ~ 31680066 (+)

Expression


Co-expression Network