G169930


Basic Information

Item Value
gene id G169930
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30411167 ~ 30418143 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU230441
TCTTCAGTCTTGTATCAGCAACCTTAATACTTCACCAACTTTTTCAGAATGAAACAGCGTGCTGTAACAACTACCAACAGAGTTTTATTGGTTCGTTGATAACAATCATTACACAGGTACATCTATAAACAAATAAGGAACTGCACACTTGTACTTGATACAGAGATCTAAAACCCACATGAATATTGCTACTGCTGGTATGCATTTGACATCTCAAATAAATGTACAGTTTTGTTTGTTGGCCTTTAAGAAGCCAGTCtcaacaggttttttttttttttttaatggttacACACCTCATTAGCTTGGCTACGAAAACAAATTCCATTTTTACCATCCTTACAATGTACCACTACCCACTGCATATAGAAAGATTGAAAACCCTTTTCACAGCAGCTTTACAAAGTTATTGCGATGCTATCACAGAACAGAGACACAACCAAACTAGCGATGCACAGCTCTAATAGGGAGAGCTCCAGTAATAGGGATTTTAGCTTTATTGATCAGATTCATTAAGAAAAATGGCATGAGTACAAGAGTTAACATATAGGAACAAAGCTTACAAACATTCTAAAACACTGTTCTTCattataaacaataaaacaatgagTTGCCCTGTGACTTTGTCCATCCCCACCCCGGCACAGATTACATACACTGTCCCTTATAAAGCATATGGAATGTAGTCCCCGCGGACACGCTCTTCCGGTTGTTGTCCCAGCTCCTGTGAACGTTGTGCTTGCGCGTTGACACGGTAACCTGTCCTGCACCCTCCCCCCTCCTTCACATTTAAAACTGAAATGAAATCCACTGACAGTAACAACAATGACCGCAACTTTTATGGCGATGCAAAATTGTGGGATGTGACGAAATTCCCGACTccaaaatgactttttttTGTTGTTTTTTA
>TU230442
CGACGTTATTCTGCTGCCTCATCTTTTTCTTCAGCTGCGTCTGTAGCCGGTGCCTCTTCCTCGGCTTTGGCTTCGCCATTCTCAGCGGGGGCCTCTGGTGCTTTCTCCTCAGGCTTGGCCTTCTCCACCTCCTTTGCTTTCTTAGGCTTAGCAGGTGCCTTCTTTGGCTTAGGTTTGGCCTCTGCCTTTGCAGTTGCAGGTCTATCGCTTAACCTTACAGATCTCCTCTtgggCGCTGATTCTTCTCCtgaTTTGCTCCTTTTAGGCATGGTTGGTTTgtgtaaaacaaaacagagctaaacGTTACTCGATACAAgaggaaatacagtatattctgGATAAAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230441 True 910 lncRNA 0.39 2 30411167 30418143
TU230442 False 346 lncRNA 0.49 6 30412208 30414656

Neighbor

gene id symbol gene type direction distance location
slc37a4b LOC103394812,LOC103476137,LOC106951585,LOC106926292,LOC103129769 coding upstream 3438 30392228 ~ 30407729 (+)
LOC120543994 LOC103357896,LOC100709839,LOC102310645 coding upstream 101774 30294505 ~ 30309393 (+)
si:ch211-266i6.3 NA coding upstream 144809 30262106 ~ 30266358 (+)
dgat2 dgat2 coding upstream 401585 29994769 ~ 30009582 (+)
mogat2 mogat2 coding upstream 422800 29972641 ~ 29988367 (+)
igsf5a NA coding downstream 13645 30431788 ~ 30457805 (+)
gdpd5a LOC103363747 coding downstream 505590 30923733 ~ 30964833 (+)
nrip1b nrip1 coding downstream 611698 31029841 ~ 31074831 (+)
usp25 usp25 coding downstream 674876 31093019 ~ 31132767 (+)
sim2 LOC107572951,LOC107676491,LOC106906485,LOC103129244 coding downstream 971451 31389594 ~ 31420284 (+)
G169929 NA non-coding upstream 21536 30389381 ~ 30389631 (+)
G169855 stt3a non-coding upstream 136003 30270180 ~ 30275164 (+)
G169840 wnt11,LOC105418209 non-coding upstream 185540 30222508 ~ 30225627 (+)
G169833 NA non-coding upstream 206748 30202462 ~ 30204419 (+)
G169820 NA non-coding upstream 270753 30140184 ~ 30140414 (+)
LOC120544704 NA non-coding downstream 10595 30428738 ~ 30431487 (+)
G169964 LOC107386033,LOC105928111,LOC103476139 non-coding downstream 96246 30514389 ~ 30517602 (+)
G169974 NA non-coding downstream 121100 30539243 ~ 30549088 (+)
G169984 NA non-coding downstream 198405 30616548 ~ 30689523 (+)
G169990 NA non-coding downstream 258936 30677079 ~ 30698276 (+)
G169814 NA other upstream 282235 30128532 ~ 30128932 (+)
uvrag uvrag other upstream 297477 30011333 ~ 30113690 (+)
G169789 map6 other upstream 440060 29945874 ~ 29971107 (+)
LOC120544198 vmp1 other upstream 1468835 28881734 ~ 28942332 (+)
ftr82 LOC104966639,LOC103359483,LOC104933521,LOC108233798,LOC106511051 other upstream 1608282 28796512 ~ 28802885 (+)
pcp4a NA other downstream 56308 30474451 ~ 30502597 (+)
G170156 NA other downstream 767794 31185937 ~ 31218284 (+)
LOC120544216 NA other downstream 1062169 31480312 ~ 31509416 (+)
micu2 micu2,LOC103399085,LOC104943497 other downstream 1184371 31602514 ~ 31611713 (+)
G170284 NA other downstream 1259855 31677998 ~ 31680066 (+)

Expression


Co-expression Network