G169990


Basic Information

Item Value
gene id G169990
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30677079 ~ 30698276 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU230518
AATGTCAAACTGAAACAAAGTTCTTTgtgcaaaatgtgttttattacaaCAAATAAATAGCTTGATTTTGGTCAAATACAAACATTCAATCTGTATTAATAacaagaatataaaaaaaatgaaatcatacATCAGTTTAAATTTGTAcaatctttttgttttttatatccTCCCCATGATTACGTTTCCTCAGAGCTTCAGATTCAAAGTGCAAAGTGTGTCATAAAGTAAGTACTGCTGATTAAAGACAGAGGTTTGAGTTAAGGTTTACTGAGAACTCTGTCACTCGTTCtgtggagataaaaaaaaaaaagatagaattAAAAATGTGAACCTGTGAACAATTAGTCattattagtgttttttatTACTCAGAAAGCTGAAAATAACTTTCAACTGTGAAAGAGAGCAACAATGCATTTGGGAAATTAGAATCCCATTTCTACAGAATACAGATAATTACATCTCTATTGCAATAACATACTGTACCTGCATTTGTTCATATACCCAGTGGATAAAGTAGGTAACATTGCCGTAGACTCCTGGCTTGTTCCTCAAAGCACATCCAATTCCCCAGCTAGTGTCCCCTGCCAGCCACCATACATCTCCCTCCTTGACCACCAGGGGCCCTCCACTGTCGCCCTGCAGCACACAGGAGGAATACATGTCTcagattagtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgcgtgtgtgcgtgtgtgcgtgcgtgcgtgcgtgcgtgcgtgcgctgtgcgtgcgtgcgtgcatgcatgcttgattgcgtgtctgtgtgtgcgtatttTTGGTCTGCGTTTCTTTAGTTGCAATCCATCCAGTCATGGTTTAACAGATTGCGAATCACTCTTCTCCGTGCGTAGTGGTACTCAGTCTGGCTGGATCCATATGAAAAGTACAGGTAACCTGGAAGGGGGGATGCATCATTGGTATCTCCCCAAACTGGTAGTAATAATGTTACTGTGAAGGGACTAACCTTTGACTGTTACCTACCTTGGTTCTCAAAAGCAGCATCCACTCTTAAGCCAATCCCAGGGAACTCTACGCTAATTAATTTTGGGTACCCATCATCCATTCTGCCCATCCTTTCATTGTAGCTATATGAGGAATATGGAGAGGTGTTCATCAACATGTGGTATCTGTCAGGACTGATCCTAGATGTTCATGGCTATCGACATTACTCACCTCCAGTATCTGTTATTcacaaagaggagggttttgcTTGTGATTGACACATGGACGGCAGCATCTACCTTGGTGACAGATGGAGGGAAGCCAAAGTCGCTGAGAGGTTTGGGATAACCAGGTAGGACAGTGTTTCCTCTGATCCCCCAATAATGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230518 True 1403 lncRNA 0.42 2 30677079 30698276

Neighbor

gene id symbol gene type direction distance location
igsf5a NA coding upstream 219274 30431788 ~ 30457805 (+)
slc37a4b LOC103394812,LOC103476137,LOC106951585,LOC106926292,LOC103129769 coding upstream 269350 30392228 ~ 30407729 (+)
LOC120543994 LOC103357896,LOC100709839,LOC102310645 coding upstream 367686 30294505 ~ 30309393 (+)
si:ch211-266i6.3 NA coding upstream 410721 30262106 ~ 30266358 (+)
dgat2 dgat2 coding upstream 667497 29994769 ~ 30009582 (+)
gdpd5a LOC103363747 coding downstream 225457 30923733 ~ 30964833 (+)
nrip1b nrip1 coding downstream 331565 31029841 ~ 31074831 (+)
usp25 usp25 coding downstream 394743 31093019 ~ 31132767 (+)
sim2 LOC107572951,LOC107676491,LOC106906485,LOC103129244 coding downstream 691318 31389594 ~ 31420284 (+)
sptbn4a LOC104963391,LOC100709524 coding downstream 854512 31552788 ~ 31597093 (+)
G169974 NA non-coding upstream 127991 30539243 ~ 30549088 (+)
G169964 LOC107386033,LOC105928111,LOC103476139 non-coding upstream 159477 30514389 ~ 30517602 (+)
LOC120544704 NA non-coding upstream 245592 30428738 ~ 30431487 (+)
G169930 NA non-coding upstream 258936 30411167 ~ 30418143 (+)
G169929 NA non-coding upstream 287448 30389381 ~ 30389631 (+)
LOC120543895 NA non-coding downstream 95657 30793933 ~ 30795838 (+)
G170068 NA non-coding downstream 171584 30869860 ~ 30870876 (+)
G170070 NA non-coding downstream 189726 30888002 ~ 30889454 (+)
LOC120544343 NA non-coding downstream 273100 30971376 ~ 30979232 (+)
G170117 NA non-coding downstream 387944 31086220 ~ 31086463 (+)
pcp4a NA other upstream 174482 30474451 ~ 30502597 (+)
G169814 NA other upstream 548147 30128532 ~ 30128932 (+)
uvrag uvrag other upstream 563389 30011333 ~ 30113690 (+)
G169789 map6 other upstream 705972 29945874 ~ 29971107 (+)
LOC120544198 vmp1 other upstream 1734747 28881734 ~ 28942332 (+)
G170156 NA other downstream 487661 31185937 ~ 31218284 (+)
LOC120544216 NA other downstream 782036 31480312 ~ 31509416 (+)
micu2 micu2,LOC103399085,LOC104943497 other downstream 904238 31602514 ~ 31611713 (+)
G170284 NA other downstream 979722 31677998 ~ 31680066 (+)
G170409 NA other downstream 1365891 32064167 ~ 32064730 (+)

Expression


Co-expression Network