G170117


Basic Information

Item Value
gene id G170117
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 31086220 ~ 31086463 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU230702
aaaaaaggtaaatacaaaaatgagaaacaagatttttggtCATTATGGGTGCTTATCTCTTAGAACTtcatcagaacaggtgaaagtgcttgaaatgtaacaattatgtaactttgtgtgggaatagcaggtgcagaaagacaacatagtttcatagcacctacaattaAATACACTCGGACCTgaacacctcatatgtaatagCTATGTGTTGGTGGGGGTGTactgtgtgcagtcattgaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230702 True 244 lncRNA 0.36 1 31086220 31086463

Neighbor

gene id symbol gene type direction distance location
nrip1b nrip1 coding upstream 11389 31029841 ~ 31074831 (+)
gdpd5a LOC103363747 coding upstream 121387 30923733 ~ 30964833 (+)
igsf5a NA coding upstream 628415 30431788 ~ 30457805 (+)
slc37a4b LOC103394812,LOC103476137,LOC106951585,LOC106926292,LOC103129769 coding upstream 678491 30392228 ~ 30407729 (+)
LOC120543994 LOC103357896,LOC100709839,LOC102310645 coding upstream 776827 30294505 ~ 30309393 (+)
usp25 usp25 coding downstream 6556 31093019 ~ 31132767 (+)
sim2 LOC107572951,LOC107676491,LOC106906485,LOC103129244 coding downstream 303131 31389594 ~ 31420284 (+)
sptbn4a LOC104963391,LOC100709524 coding downstream 466325 31552788 ~ 31597093 (+)
ckma LOC107386319,LOC103368860,LOC103141037,LOC106948201,LOC105930111,LOC104964774 coding downstream 609669 31696132 ~ 31701593 (+)
trnas-gcu_8 NA coding downstream 716368 31802831 ~ 31802912 (+)
LOC120544343 NA non-coding upstream 106988 30971376 ~ 30979232 (+)
G170070 NA non-coding upstream 196766 30888002 ~ 30889454 (+)
G170068 NA non-coding upstream 215344 30869860 ~ 30870876 (+)
LOC120543895 NA non-coding upstream 290382 30793933 ~ 30795838 (+)
G169990 NA non-coding upstream 387944 30677079 ~ 30698276 (+)
G170139 NA non-coding downstream 50398 31136861 ~ 31137154 (+)
G170146 NA non-coding downstream 53970 31140433 ~ 31140896 (+)
G170152 NA non-coding downstream 57339 31143802 ~ 31144084 (+)
G170155 NA non-coding downstream 58416 31144879 ~ 31145135 (+)
G170173 NA non-coding downstream 239530 31325993 ~ 31326221 (+)
pcp4a NA other upstream 583623 30474451 ~ 30502597 (+)
G169814 NA other upstream 957288 30128532 ~ 30128932 (+)
uvrag uvrag other upstream 972530 30011333 ~ 30113690 (+)
G169789 map6 other upstream 1115113 29945874 ~ 29971107 (+)
LOC120544198 vmp1 other upstream 2143888 28881734 ~ 28942332 (+)
G170156 NA other downstream 99474 31185937 ~ 31218284 (+)
LOC120544216 NA other downstream 393849 31480312 ~ 31509416 (+)
micu2 micu2,LOC103399085,LOC104943497 other downstream 516051 31602514 ~ 31611713 (+)
G170284 NA other downstream 591535 31677998 ~ 31680066 (+)
G170409 NA other downstream 977704 32064167 ~ 32064730 (+)

Expression


Co-expression Network