LOC120543895


Basic Information

Item Value
gene id LOC120543895
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30793933 ~ 30795838 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636408.1
TTCCATGTGAGGAATTGTAAACAACTTCTTGGATTGAAATATCTTGGAAATATATGAAACAGCACGAAAGACTTGAAAGGGTTAAATCAGGAACCATTCTGTAGACAATCAGAATTCAGAGTCCTTAACGGATCTGCCAGGTGCAGACAGAGGGTCAACTTCAGGTCAACTTCAAAGACAACAAGTCTCATTTCAGCAAAGTCAGGAGCAGGAGATTTGGGACATGTGACTCTAAACGTGTGAAACTTCCAATCATTTTAAAGAACAATGTTTGAGTGGGAGGGGTTACGTTAGAAAGCGCGGTGGATACAGCGTAGAGACCGGTAGAGATACAGTGTGAGCCAGAGGAGCGCGGCTGTTTTACGTTGTCATAGTGTTTGAGACAGTTTGGAAGAGAGCGACTTTTATGTGCAACGCGTGCGAAATTCAGGATGCAAAAGATACCATTGACAGTCTGCACGTGAACAAGAACTGCAAGATTTGCTGACCTCAAAGTAATCTGAAGAGGAAGCTCTCCTTTGGCAGCAGAGTACTTCATGCTTTCTGTGGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636408.1 True 552 lncRNA 0.44 3 30793933 30795838

Neighbor

gene id symbol gene type direction distance location
igsf5a NA coding upstream 336128 30431788 ~ 30457805 (+)
slc37a4b LOC103394812,LOC103476137,LOC106951585,LOC106926292,LOC103129769 coding upstream 386204 30392228 ~ 30407729 (+)
LOC120543994 LOC103357896,LOC100709839,LOC102310645 coding upstream 484540 30294505 ~ 30309393 (+)
si:ch211-266i6.3 NA coding upstream 527575 30262106 ~ 30266358 (+)
dgat2 dgat2 coding upstream 784351 29994769 ~ 30009582 (+)
gdpd5a LOC103363747 coding downstream 127895 30923733 ~ 30964833 (+)
nrip1b nrip1 coding downstream 234003 31029841 ~ 31074831 (+)
usp25 usp25 coding downstream 297181 31093019 ~ 31132767 (+)
sim2 LOC107572951,LOC107676491,LOC106906485,LOC103129244 coding downstream 593756 31389594 ~ 31420284 (+)
sptbn4a LOC104963391,LOC100709524 coding downstream 756950 31552788 ~ 31597093 (+)
G169990 NA non-coding upstream 95657 30677079 ~ 30698276 (+)
G169999 acat1 non-coding upstream 97214 30695512 ~ 30696719 (+)
G169984 NA non-coding upstream 104410 30616548 ~ 30689523 (+)
G169974 NA non-coding upstream 244845 30539243 ~ 30549088 (+)
G169964 LOC107386033,LOC105928111,LOC103476139 non-coding upstream 276331 30514389 ~ 30517602 (+)
G170068 NA non-coding downstream 74022 30869860 ~ 30870876 (+)
G170070 NA non-coding downstream 92164 30888002 ~ 30889454 (+)
LOC120544343 NA non-coding downstream 175538 30971376 ~ 30979232 (+)
G170117 NA non-coding downstream 290382 31086220 ~ 31086463 (+)
G170139 NA non-coding downstream 341023 31136861 ~ 31137154 (+)
pcp4a NA other upstream 291336 30474451 ~ 30502597 (+)
G169814 NA other upstream 665001 30128532 ~ 30128932 (+)
uvrag uvrag other upstream 680243 30011333 ~ 30113690 (+)
G169789 map6 other upstream 822826 29945874 ~ 29971107 (+)
LOC120544198 vmp1 other upstream 1851601 28881734 ~ 28942332 (+)
G170156 NA other downstream 390099 31185937 ~ 31218284 (+)
LOC120544216 NA other downstream 684474 31480312 ~ 31509416 (+)
micu2 micu2,LOC103399085,LOC104943497 other downstream 806676 31602514 ~ 31611713 (+)
G170284 NA other downstream 882160 31677998 ~ 31680066 (+)
G170409 NA other downstream 1268329 32064167 ~ 32064730 (+)

Expression


Co-expression Network