LOC120543667


Basic Information

Item Value
gene id LOC120543667
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 27476285 ~ 27477131 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636380.1
CATAGTCACAGTCTTCTTCATCCGGGAGCCAGAGGCAGCGGCTCCCAGCGCAGGCTTCGTCAAGGCATCATCGCTGCTCGCTCTTTTCAGCTAGAGACACATCTGCTCTGCCATTGGAACCTGACTCCTGCTACTGCTTCACTCCTGCCATCCACTGGACCAGAACCACCATGACTGGACCCCTGGAATCTACCAAACCTGGACTTGATACTTGAGTACTTTGAATAAACCTGTTAATTCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636380.1 True 243 lncRNA 0.52 2 27476285 27477131

Neighbor

gene id symbol gene type direction distance location
zswim7 zswim7 coding upstream 86056 27374901 ~ 27390229 (+)
ncor1 ncor1 coding upstream 102685 27314554 ~ 27373600 (+)
cenpv cenpv coding upstream 174783 27298037 ~ 27301502 (+)
abr abr,LOC103375456 coding upstream 187852 27136017 ~ 27288433 (+)
timm22 timm22 coding downstream 20429 27497560 ~ 27500438 (+)
p2rx5 p2rx5 coding downstream 28026 27505157 ~ 27515889 (+)
trpv1 NA coding downstream 54297 27531428 ~ 27548911 (+)
eral1 eral1,LOC102782944 coding downstream 109762 27586893 ~ 27593961 (+)
si:ch211-283g2.1 LOC104963922,LOC107387056,LOC108233828,LOC100700598 coding downstream 153135 27630266 ~ 27637033 (+)
G169157 NA non-coding upstream 49963 27425153 ~ 27426322 (+)
G169095 ubb,ubc,LOC107553588 non-coding upstream 178508 27291945 ~ 27297777 (+)
G169060 NA non-coding upstream 394624 27038854 ~ 27081661 (+)
G169027 NA non-coding upstream 515646 26957695 ~ 26960639 (+)
G169018 NA non-coding upstream 636728 26838992 ~ 26839557 (+)
G169209 LOC107090330,LOC102785725,LOC102220786 non-coding downstream 222987 27700118 ~ 27701522 (+)
G169215 NA non-coding downstream 235944 27713075 ~ 27713796 (+)
G169254 NA non-coding downstream 238264 27715395 ~ 27716931 (+)
G169294 LOC103363689 non-coding downstream 323313 27800444 ~ 27832402 (+)
G169342 NA non-coding downstream 570204 28047335 ~ 28047574 (+)
G169042 stip1 other upstream 511245 26962206 ~ 26965040 (+)
banf1 banf1,LOC106523121,LOC104926323,LOC108233898 other upstream 789022 26681536 ~ 26687263 (+)
esrra esrra,LOC103363365,LOC100707827,LOC104926321,LOC106534575 other upstream 800490 26659358 ~ 26675795 (+)
LOC120544064 tmem164 other upstream 907785 26543796 ~ 26568500 (+)
nlgn2b nlgn2b,LOC104920019,LOC101475673,LOC100709892,LOC102787387 other upstream 1252840 26000063 ~ 26223445 (+)
shpk shpk,LOC102781293 other downstream 42900 27520031 ~ 27531315 (+)
ftr82 LOC104966639,LOC103359483,LOC104933521,LOC108233798,LOC106511051 other downstream 1319381 28796512 ~ 28802885 (+)
LOC120544198 vmp1 other downstream 1404603 28881734 ~ 28942332 (+)
G169789 map6 other downstream 2468743 29945874 ~ 29971107 (+)
uvrag uvrag other downstream 2534202 30011333 ~ 30113690 (+)

Expression


Co-expression Network