G169342


Basic Information

Item Value
gene id G169342
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 28047335 ~ 28047574 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU229634
CAGGGAGAGGAGAGGCCCCGCGTGGAGCCCGCGCAGGAAGTCAGAAAAGAGGAAGCTGCTTTGTCTCACAAAGCCATGCATTGCCCAGAGTGTTGCCCCAGTCAGTTCACATGGGCGGTGTGTGGCGCGGAGCAAAGCTCGCAACTCTTTCCTCCATTTTATAATTCATCTGTTTCAACtgtcctggaaaaaaaaaaaaaagagataatcATGTACATTATGATGTATGATCTGTGTGAT

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway
ko04662 B cell receptor signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU229634 True 240 lncRNA 0.48 1 28047335 28047574

Neighbor

gene id symbol gene type direction distance location
supt4h1 supt4h1 coding upstream 9708 28035247 ~ 28037627 (+)
hpda LOC102309211,LOC103363687,LOC101479635 coding upstream 117446 27922630 ~ 27929889 (+)
vkorc1l1 vkorc1l1 coding upstream 334280 27702157 ~ 27713055 (+)
LOC120543630 myo19,LOC102784659 coding upstream 355076 27671519 ~ 27692259 (+)
si:ch211-283g2.1 LOC104963922,LOC107387056,LOC108233828,LOC100700598 coding upstream 410302 27630266 ~ 27637033 (+)
LOC120544670 LOC103133326 coding downstream 113404 28160978 ~ 28175458 (+)
ywhag1 143g1,LOC101156793,LOC108233911,LOC107387033,LOC103041195,LOC103395178 coding downstream 131453 28179027 ~ 28197663 (+)
p2rx1 p2rx1 coding downstream 326916 28374490 ~ 28395450 (+)
LOC120575697 LOC103372553,LOC104967633 coding downstream 585435 28633009 ~ 28636517 (+)
spns3 NA coding downstream 622553 28670127 ~ 28677180 (+)
G169294 LOC103363689 non-coding upstream 214933 27800444 ~ 27832402 (+)
G169254 NA non-coding upstream 330404 27715395 ~ 27716931 (+)
G169215 NA non-coding upstream 333539 27713075 ~ 27713796 (+)
G169209 LOC107090330,LOC102785725,LOC102220786 non-coding upstream 345813 27700118 ~ 27701522 (+)
LOC120543667 NA non-coding upstream 570204 27476285 ~ 27477131 (+)
G169354 NA non-coding downstream 160089 28207663 ~ 28259294 (+)
G169363 NA non-coding downstream 169742 28217316 ~ 28218837 (+)
G169367 NA non-coding downstream 182693 28230267 ~ 28237599 (+)
G169422 NA non-coding downstream 351833 28399407 ~ 28400916 (+)
G169431 NA non-coding downstream 428336 28475910 ~ 28480156 (+)
shpk shpk,LOC102781293 other upstream 516020 27520031 ~ 27531315 (+)
G169042 stip1 other upstream 1082295 26962206 ~ 26965040 (+)
banf1 banf1,LOC106523121,LOC104926323,LOC108233898 other upstream 1360072 26681536 ~ 26687263 (+)
esrra esrra,LOC103363365,LOC100707827,LOC104926321,LOC106534575 other upstream 1371540 26659358 ~ 26675795 (+)
LOC120544064 tmem164 other upstream 1478835 26543796 ~ 26568500 (+)
ftr82 LOC104966639,LOC103359483,LOC104933521,LOC108233798,LOC106511051 other downstream 748938 28796512 ~ 28802885 (+)
LOC120544198 vmp1 other downstream 834160 28881734 ~ 28942332 (+)
G169789 map6 other downstream 1898300 29945874 ~ 29971107 (+)
uvrag uvrag other downstream 1963759 30011333 ~ 30113690 (+)
G169814 NA other downstream 2080958 30128532 ~ 30128932 (+)

Expression


Co-expression Network