G169431


Basic Information

Item Value
gene id G169431
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 28475910 ~ 28480156 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU229788
GAATAAATAACAAGATAAATTATCTTTATTTCCACGTGTTTGTCATTTATAAAATTATGTGTCCACAATTAATATTAACAAGGCAATACAGAGAATCCTTTTAATTTCTCAGAGGTGGAACTCGGGCTCTAGAGACTGTTTACTCGTCTatacagacagagaaagggaaCGGTTGTTCAGATGTTATTCATATGAACCTGATCACTCCTTCACGGTTAGTAAAGGTTATTCTTTTACAGATGGTCGAGGACTTTGAGTACCATGCCAGAAGAGTTGTCAGAGCCAAAGGGATTatcggggtggggggggggggtctctaGAGCCCGCATCCACACCAAGCCCTTCAATGTACAGTCATAAAACTTCATAACCCAGGATTCATCACTGCTTATCGCTCAGTGTAAACCAGACACAGATCATTCACAATTTCTGGAACATTCTCGCCCCGGATAACTATCCCCGAAATGATCAGCGTCATCGTCTTTAATCAGCGTAAGTATGATTCTTGTCTATCTTAAACATGATAACGTCGTATTCTTTTCCCTACAGTAAAAGACACAAAACCCCAGCAACTGTAAAAACCAAATGGGAACAATGACGAAACAACCTTTCTATTCTACAAAACCAAAacgaaaaaaaagaggagatcCTTAGATACCATGTGCtcaaagaaagaataataaaaaaaatggtttctCGCAAGTCTGTGTTGTCGGTAAGTAGGTTTCGTTGATGCAAGTTatcaaaaaattaaatattatatactgtataggtTATTATTACAGTAACAAGGTTCCATGCGATCATATTCTCATCTTCTGTACAGAGTTGAGGATTCAGTAGTAAATAACAAGGCTATACAGACCTATAGTGCCTGGTGGCCAGAGTGCTGGCGCATGTTACAGAGCCATGGAGACCTGGGACAGGGACAGAGGGGCCACATTCTCAAAAACTCAACATAACCGCTGCTTTATGTCAaaattagagctgcaaaaatGAATCCATTAATCAataagttgtcaactattataTTAATCTCCAACTATTGTGATATACGAGTCATTGGAGTATCATTGACTGATGAGGCATTTCAGATACCAGCTTGTCGTTCTGcatctgtttttgtctcctAAGAATAAGTTGTCTTTGACATTTAATATAATTATCAACATAGGCCATagtacgtgtatgtgtgtgagtgtttatatGAAAagtctagagctgcaaagatttatCGATTTATCAATTAGTTGTCAGCTATTAAATGAATCGCCCACTCTTTTGATAATCGATTGGAGTTATTTTTCATGAAAGAAAAGTagaaattctctgattccagcttcttaaatgtgaatagtgtttggtttcttctctcctctgtgacagtaaacagagtatctttgagttgtggacaaaacacagacatttgaggaaaacactgatcgacatttttcaccattttctgacattttatagaccaaacaactaatccattaaatcGATTCATAAATATTCAACAGATtcattgacaatgaaaataaggGTCAGTTGCAGTCCTAGTCAAATAGAATCGGCATCAAGCCATTATTTACTAGACACAAAATCCAGCTTCTGGTATAAAACTAGAAGGAATATTCCACCCTTAAATCTTCTTTAATGTTCATAGCTTTGTGTGCCTGGTGATGTCTTTTAGTGTCCTTTCTCTTAATTTGCTTCATCAACTTCTACTAAAGGGAGTTGTTGGAAATATACAGCAGACAGCAACAACCACCCCAGAGAGCATATAGGACTGGAAATATCTGACTGGATGATGTCATGCCATCTAAGTTTGGCTAGTTATCCACCgggagtaagaaaaaaaaaaaaacatcaccaaGCAACAAAAATAGatgaatacaaacacacacagtcctctAAGCATTAGCAGATTGGTCACTAATATTGGAAGTGTTTAAGGATGGAGTTCCCTTTAGATTCTAAACCATGCTTGATGCCACACGGCACAAAACCAGTCCTGCTTGTTGAAATCAGGTCTGGAAGCaagaaaaaaggagggaaaaagaagaaagatatGCACATTGTcaataattaattcatttcaATTAAAATGTAGTTGCCTTTAGTTGCCTTGATTAAATTGTTTGAAGATCTGTGTATTAGAATGATTAAATTCATTGACATATTTTTTTATcccagcagtttttttttttttttttaatgtgcacGCTCTACTCTGCCCTATGTGGAAGCAACAAGAGACCAAAAACACCACTGACCCAGTCCACAGAGCACCAGGGCCCAACACAAAACCCATCATTAAGACTTAAAGACACAATCCAAACGGCGTGGGTTCATTCAGTCATATACATTACTATTTAGTCATTATAAAACAATACCAAAGTGAGTCGCTAAAGCACTGAGAGAGCAGGAGGAGCTGAGGGAGCAGCGCACTAAGCACAACTAAGAAGGCTTTCCTATTAAACATGCCTCAGACCAGGTGGACATTCAGTCTGTAAGACCGCAGGCGATCAGAGTGAACTGTTAGGGCACGTTAGGGCAGGGGGTGGGGGCTGATTAACGGCTAGCAGAAACACATTCATTTGGACCACATTTTCAATGTGGAGGTGCAGTGGGCTGTATAAGGCATGGATGTTACAGCAAATGTGCTTAATATATAAATGATTCATGACCAAGTGAGACAATCAAGCAGTTTACTTGCCATTTCTTAACTTACTTTAACTACATCATCCGTGCCATTCAATCACCCAAAAGCCTGTCAAGTCAAATCAGACAAATTAATTCAAGTAAGgctatatgcacacacatgttAGCGCTAGTGCGGGGTTAGAAATAACTGAAGAAATGAAAAGGAAGATGGTGCTCCAAGACAATTATTATGTACAAAATGTCACGGAGCTTTATCCTCTTGCTCAGATCTGCCTTTAATTTAGATATTTGACAGCCAAAACTCCAATGGCAGCACAGCAGATGGACATTAAAGTGAGGCTTAACAGGACCAGCTGGGTGGACTGGCTGACGACTACTCTACTGATATGctggtttgacattttttatttatttaggtattTTTATTAAGTTTGCCAAGTCTGTGAGCTGAACCTCAGCTCCTCGAAATTAAGAGCCAAGGAAGCGGCCAAGTGGCGTAAAGCTATTCACACCTGTGGGTGGAGCGACATCTCCACGACCTAACTCAAGAGCACGATTAAAGCCgcgaccccccctcccccccccgggAACACAGCTGCCTCCTCGACagagagcgagaaagagagacagagagagacagagagccgAGACAGGCAAAAGGAGAGTCATTCTGCGTAAAACACAATCAACGGGAGTTAGACTTTATATGTGGTAAGGGTAAAGAGAAAGAGCGATGAAGGAGTAGCGCGCTGTGACACACTGGCCAGAGATGCTGTTGAGCTGATAAGGCGCCCGCAGAGCTGGCTGGAACTCGCTGCCAGTAGTGTGGGTGGCACAAGCCCGGGCGGTACTTCCAAATAATGTTTTTCTGGACGCACACGAAAACAACGGCTCTCTCTACACGGGTCCCACTTGCTGATGCTCTTCTTTTGCCAGCGTGTACCCCAGTATCTggccctctcactctctctttcggTCTCAGCGCTAATTTCAAAATTgtcctccctctccttccctccccaAAGTCCAGTTACTGCACCACtatgtttgtactgtatacagTCAGAAACTcaatgagcagaaatctttAAAAAGCAGAGCCCTGGGCAGTTAtatcttcttcttttctgcAGTTGTTTCTTACTCTTGCAACTACAAAGACAGATCTTCATCTGCCTGttcacatgcacgcacgcacgcacgcacgcacgcacgcacgcacgcacgcacgcgacgcacgcacgcacacacacacatcattcaCTCACACAATCGTACAAAGCCATGCTTGCAGGAGACACGCATGCTCTCTTTCTTGCACACTCGTTCTCATGCAAGCCCCCCGCTCATTTCTAGTGGTGGTTTGTTGGACATGCAggagagggggaatgaggaCAGGGGAGAGAGGAAAGGTTCCTAGCTCGTAAAGGGAAAAGGGTAGGCGTGTGTctaagtgtgtgagtgtgttgagGGAGAGGTCTTAGTCCTGTCGCCATCTCCTCCGATATTTCTTGTCCTCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229788 True 4189 lncRNA 0.42 2 28475910 28480156

Neighbor

gene id symbol gene type direction distance location
p2rx1 p2rx1 coding upstream 80460 28374490 ~ 28395450 (+)
ywhag1 143g1,LOC101156793,LOC108233911,LOC107387033,LOC103041195,LOC103395178 coding upstream 278247 28179027 ~ 28197663 (+)
LOC120544670 LOC103133326 coding upstream 300452 28160978 ~ 28175458 (+)
supt4h1 supt4h1 coding upstream 438283 28035247 ~ 28037627 (+)
hpda LOC102309211,LOC103363687,LOC101479635 coding upstream 546021 27922630 ~ 27929889 (+)
LOC120575697 LOC103372553,LOC104967633 coding downstream 152853 28633009 ~ 28636517 (+)
spns3 NA coding downstream 189971 28670127 ~ 28677180 (+)
spns2 spns2 coding downstream 209402 28689558 ~ 28750536 (+)
cltca cltc coding downstream 350795 28830951 ~ 28874169 (+)
rps6kb1a rps6kb1,LOC103359476,LOC103395203 coding downstream 473059 28953215 ~ 28971259 (+)
G169422 NA non-coding upstream 74994 28399407 ~ 28400916 (+)
G169354 NA non-coding upstream 216616 28207663 ~ 28259294 (+)
G169367 NA non-coding upstream 238311 28230267 ~ 28237599 (+)
G169363 NA non-coding upstream 257073 28217316 ~ 28218837 (+)
G169342 NA non-coding upstream 428336 28047335 ~ 28047574 (+)
G169532 NA non-coding downstream 270456 28750612 ~ 28751299 (+)
G169534 NA non-coding downstream 271642 28751798 ~ 28752755 (+)
G169536 NA non-coding downstream 277980 28758136 ~ 28759250 (+)
G169540 NA non-coding downstream 294675 28774831 ~ 28778665 (+)
G169561 atp5l,LOC102215954,LOC102793421,LOC100709019 non-coding downstream 324227 28804383 ~ 28808679 (+)
shpk shpk,LOC102781293 other upstream 944595 27520031 ~ 27531315 (+)
G169042 stip1 other upstream 1510870 26962206 ~ 26965040 (+)
banf1 banf1,LOC106523121,LOC104926323,LOC108233898 other upstream 1788647 26681536 ~ 26687263 (+)
esrra esrra,LOC103363365,LOC100707827,LOC104926321,LOC106534575 other upstream 1800115 26659358 ~ 26675795 (+)
LOC120544064 tmem164 other upstream 1907410 26543796 ~ 26568500 (+)
ftr82 LOC104966639,LOC103359483,LOC104933521,LOC108233798,LOC106511051 other downstream 316356 28796512 ~ 28802885 (+)
LOC120544198 vmp1 other downstream 401578 28881734 ~ 28942332 (+)
G169789 map6 other downstream 1465718 29945874 ~ 29971107 (+)
uvrag uvrag other downstream 1531177 30011333 ~ 30113690 (+)
G169814 NA other downstream 1648376 30128532 ~ 30128932 (+)

Expression


Co-expression Network