ywhag1 (143g1,LOC101156793,LOC108233911,LOC107387033,LOC103041195,LOC103395178)


Basic Information

Item Value
gene id ywhag1
gene name 143g1,LOC101156793,LOC108233911,LOC107387033,LOC103041195,LOC103395178
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 28179027 ~ 28197663 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778601.1
GAAAGTGCTCGGAGGGGGAGGGGTGTCCCGTCGGcaggcacacagacagcagGCAGCAGCTGCAGCGAGGAGGACCCGGTACCGTTACTCTGCATTAAAACATTCATATTACGATTTTTAGCTCCGAAACACATATAAGACagcaacagaaacacacagaccacaTCTAAAATGGTTGACCGCGAGCAACTGGTGCAGAAAGCCAGGCTGGCCGAGCAGGCAGAGAGGTATGATGATATGGCAGCTGCCATGAAATCGGTCACAGAGCTGAACGAAGCGCTATCCAATGAGGAGAGGAACCTGCTCTCCGTGGCTTACAAGAACGTGGTTGGGGCGAGGCGTTCGTCCTGGCGCGTCATCTCCAGCATCGAGCAGAAGACATCGGCCGACGGCAACGAGAAGAAGATCGAGATGGTGCGGGCCTACCGGGAAAAGATCGAGAAGGAGCTGGAGGCCGTCTGCCAGGACGTGCTCAACCTCCTCGACAACTTCCTGATCAAGAACTGCAACGAGACGCAGCACGAGAGCAAAGTCTTCTACCTGAAGATGAAGGGCGACTACTACCGCTACCTGGCCGAGGTGGCCACGGGGGAGAAGAGAGCGGCGGTGGTGGAGTCCTCCGAGAAGTCCTACAGCGAGGCCCATGAGATCAGCAAGGAGCACATGCAGCCCACCCACCCCATCCGCCTGGGCCTGGCTCTCAACTACTCCGTCTTCTACTATGAGATCCAGAATGCCCCGGAGCAGGCATGCCACCTGGCTAAGACCGCCTTCGACGACGCCATCGCCGAGCTGGACACCCTGAACGAGGACTCCTACAAAGACTCCACTCTGATCATGCAGCTGCTACGAGACAACTTGACGCTGTGGACGAGCGACCAGCAGGACGACGAGGGAGGCGAGGGCAACAATTAAAAATAAGAGTCCCAAAACCTCATTCtgccaaaaacaacacaacacgcTCGCTCACAaatgatgacaaaaaaaatactaGGTTTAAAAAGttcttagaaataaaaaaataaaaaaaaacgtggagGGGGAGGGGCGGTGGAACATCGGCGGCCAATTTAGCCAACGGTACTGATGTGGCTGCTGTTctttatttttcaacaaattaaaagtgaaaaaaaagttgaaggaGGGAAGACAATTTTAGTTTGAGAAATAACTTacgattaaaaaataaaataaaagaatgaaaCCCCCTCCTTCGTAGCCTCTGCAGCATTTGCCAAAATACAACTTTAGAAGCAAGAGGTACAGTATGTCATGCATCACAGTGTGACTATTGGGTAATGGTACCTTCACGTTGGCAGAGACTGGTCTTATCGCGCAAACGAAGCTGAGCTGTCTTATTGTATATCGCGAGGGGAGGAGCATTCAGAAATTGAGTTTCGATGCTTGAGCAGCCAGAAAATTAAAGTAACCTTGAATGTCATGGCCTTGCttagcgagagagagagagagagagagagagagtgagagagagagaaggacaaatgagagagcgagtgagagagcaGACAGGGTTACAGATATGAAGACGGGCTTTTAATTAAGGGGTGTCGAACTTCATCGCGTAACTTCAAAACGTACCGACATCTTTAGTTGCACCACACTATGATCGTCGAGTGAAAAGCAGGTTGTCTCTGTTATTGaagataacaataaaaaaatatatatgtttttgtttgctttgtgtCAGGTTATGTGTCCAGCTCAGTCACACAGTCATACTGTAACTAAAAATACAAATTCATAAAAGTAAAACTTAGTGCAGCTTGTCCCTCTCATGTGCTGATGTgctttattaaataaattaactgTTTTTGGACACCTAATTCTTATCGTCAGTATTGTCGTTACTATAACAACTTCTATTGGCTCCTTGTAGGAAACGATTTGATTCACAGAAATCCAGatagcaaaataaataaatggatttttattgtttttattgtttttgaatgtgGTGATTGAACATGATCATGAGCCCACCCTTATTGTCCAGTTATGCCATCTTCATAACAATCTAGTAGGATCTCTGAAACGGCGCCTGGAACCACAGACTTGACCAATGAACCAAGTAGAATTTGTGGACAGAGCACATGCAATGTTAAGTGGAAGCTCTAAAAGCAGATTTGAGGTTTGTGGATTTAATTTGTCTTCAGTTTCTTCCTGGTCAAGAAATGCACTTGCCTATTATACTGTTTCTTCAGTGTAAGATGATAACTGCTCCAATATTCTCCATAATACaatattgtgcatgctggtgaTGTATTTATACAGTAGCTTCAATTGATTAACTTATACGGTAGATGTTATGTATTCATATGAACATGGAATTACTAGACCTTAAAAATCagattattttctatttatttctttttattgcgATTGTTAGCTAGACCTTATTTtaatctgtgttttctttacgCCATTTGCTGAAGTACGCTATACCAAAACAGTGATTGTTGACAATAAATTGATCTGTTACGGACA

Function

NR:

description
14-3-3 protein gamma-1

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0007420 brain development biological_process
GO:0005737 cytoplasm cellular_component
GO:0019904 protein domain specific binding molecular_function

KEGG:

id description
K16198 YWHAG_H; 14-3-3 protein gamma/eta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778601.1 True 2505 mRNA 0.44 2 28179027 28197663

Neighbor

gene id symbol gene type direction distance location
LOC120544670 LOC103133326 coding upstream 3569 28160978 ~ 28175458 (+)
supt4h1 supt4h1 coding upstream 141400 28035247 ~ 28037627 (+)
hpda LOC102309211,LOC103363687,LOC101479635 coding upstream 249138 27922630 ~ 27929889 (+)
vkorc1l1 vkorc1l1 coding upstream 465972 27702157 ~ 27713055 (+)
LOC120543630 myo19,LOC102784659 coding upstream 486768 27671519 ~ 27692259 (+)
p2rx1 p2rx1 coding downstream 176827 28374490 ~ 28395450 (+)
LOC120575697 LOC103372553,LOC104967633 coding downstream 435346 28633009 ~ 28636517 (+)
spns3 NA coding downstream 472464 28670127 ~ 28677180 (+)
spns2 spns2 coding downstream 491895 28689558 ~ 28750536 (+)
cltca cltc coding downstream 633288 28830951 ~ 28874169 (+)
G169342 NA non-coding upstream 131453 28047335 ~ 28047574 (+)
G169294 LOC103363689 non-coding upstream 346625 27800444 ~ 27832402 (+)
G169254 NA non-coding upstream 462096 27715395 ~ 27716931 (+)
G169215 NA non-coding upstream 465231 27713075 ~ 27713796 (+)
G169209 LOC107090330,LOC102785725,LOC102220786 non-coding upstream 477505 27700118 ~ 27701522 (+)
G169354 NA non-coding downstream 10000 28207663 ~ 28259294 (+)
G169363 NA non-coding downstream 19653 28217316 ~ 28218837 (+)
G169367 NA non-coding downstream 32604 28230267 ~ 28237599 (+)
G169422 NA non-coding downstream 201744 28399407 ~ 28400916 (+)
G169431 NA non-coding downstream 278247 28475910 ~ 28480156 (+)
shpk shpk,LOC102781293 other upstream 647712 27520031 ~ 27531315 (+)
G169042 stip1 other upstream 1213987 26962206 ~ 26965040 (+)
banf1 banf1,LOC106523121,LOC104926323,LOC108233898 other upstream 1491764 26681536 ~ 26687263 (+)
esrra esrra,LOC103363365,LOC100707827,LOC104926321,LOC106534575 other upstream 1503232 26659358 ~ 26675795 (+)
LOC120544064 tmem164 other upstream 1610527 26543796 ~ 26568500 (+)
ftr82 LOC104966639,LOC103359483,LOC104933521,LOC108233798,LOC106511051 other downstream 598849 28796512 ~ 28802885 (+)
LOC120544198 vmp1 other downstream 684071 28881734 ~ 28942332 (+)
G169789 map6 other downstream 1748211 29945874 ~ 29971107 (+)
uvrag uvrag other downstream 1813670 30011333 ~ 30113690 (+)
G169814 NA other downstream 1930869 30128532 ~ 30128932 (+)

Expression


Co-expression Network