G179611


Basic Information

Item Value
gene id G179611
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 31868080 ~ 31913125 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU243235
TGCGCAGGTAGAGTGGGGGAGGTGATAAGAAGGCAGAGTGAAGGAACAGAGGCACATGGAGATCACACCAGCAACACACTATCACCTGGTTTTGCCAGAAGCAGTCAACTCCAGTCCTTTTACAGGAAGCTGACAAAGATGACTGGATCTCCAGGAATACTCATTACATGGCGTCTAACCCAGAGACTTTACACGGGCTGATGTCCAAGAACAATGCAGTAGTGGTGGGAGACATGGTGTTGCCACCGGTCGGAAAGATGCCATCCTCTCTGCTATGGTGATGCTGTCCAGACCCACCTGTGTCCTTCTACAAGCAAACCTCTGAGACGGATTACCTGCAGATGAGACAGGACTTGTGtgctttgagttttctcccagtgcagacatcacaggccacatcttcagctccagcatagcagtgatcagcaggagcagcttggagtccagtattcttcagctcctccactaaaactgctaacatggtgtttttcagcaggacaggcctcggtgtgaacATCTTCCTGCACGGAGGGTAGCTGTACTTATGATCCTCTTCATCCCAGTGgttttaatacagttcatgcaaTAGTTGTCCACAGGGAGTAGTCACCACATCCTTCAGTAGATTGAGACAGATGGAACATGAGAAGATTTCTCTGTCCAGCTGAACTCGtttctgcgccatttcacctctcaCTCAGTGACTACTGTCTGAGTCTCACTTCCTGAGAAGTAAAACTAGTTTGAGCTCCAATGTAAAAACGGCAGTGATACAACGTTGTACTTCCCCAGTATGTTGGTTACACCCATCTGCAAACTAGATCTGAAGGGGAGGGAACAAGGAAATATGTGCAGAGTGGAGCGGTCTGTGTTTGAGAGCAGGAAGAGGAGCAAGGGGTTATCAAGCTTTGTTCCTTCCTGGAAGAGGAGCGCTTTGAGAgagatactgtgtgtgttgcaaTGCCCATACTACAATTGGTATGATAGGAAAGATTTAATATATCCCAATACTTAGTATATCAAATTCAGTACGCCAAACATCATTACCACTTCAGGGAAAGTTGTACATTTACAgacatagttaaaaaaaaatatatactttatatccATGATTTATCAGTATTTATCCTCCATCCTAATGACACCTTTTTAAGCATGTTTACACTGGACTACAGCCTGTTAGTCAAACAAATGCATTCTTTTACTGATAAATTACTGGTCCTTTTTACACTAGCCTTCTTGTAAACTGCTACACCCACTTCATGCGGTATTTTACATTAACTTGTATTTTgtaatttgtttatttcttatgtattctgcatgtgtgtgtgaagaacTTTGTAACTGCACTAACTTGTTTTTCAAAAATGCTCTGTAAATAGTGTTACTTTTACTGCAGCGACTGATGTACATTCCTCTATTGAAACGCTCCAACACACCCTAAAACTCTGAACAAGTGATAGAAAACTCTGCTCATTTCTCTGACAAAGTAGTTTTAGTGAGGAAAATTGAAAGGACAGACTGCCTGACTCTAAACATGAATACTGTACtttgtggtgtttcaggaggaaAAGTTCCTTGGTTAAAGTCTTTTAACGAAAACTCGTAGAATGCCTAACTCTAACAGCTTTATATCATGTCAACTCTAACTGCTTTTAACACATTCTtaacatttttcaattttttttctccaacccAATTAACACTTTTATAGTACTTTTAACCCATATCTCAAAGGTATTTGAAGTAGTGAAATTTGGCGGGCAATGTACGAGCTGCCGTGGCCCCTGTAGGTTTACTGGTATTCTTAGTTAGGACACACTTCAGAGCCATAATATCCTGCTTAGTAGTGAAGTGAAATGTTACCTTTCAGTAGTTGACTATATTTCTGAAGTCATGTTGGCCTGCTGTtacattaatgtgtatgttgcacTCACTCGCACTGTTTCCGTGTGCCACTGCCAAGATTCAATGTTACCTTGTtagtatgattttttttaaaaagattaatttttttttccaagtgagGTAGTGACTTATGTTAAAGAATCTTATTAAACGCACTCTGAATAATCTATGAAACTGGCTGAGCTAGAGGATTTATGATTCTTTTGTATTCAGCAGCCATATCTCCTGCAGCCTTTCAACCCAGCACTACATCAGGTCAGTCACACTCAGACACTTAATAGCAAGCTTTGCATCTGGTCATGCTAACAAGTAACACTGGTTTA
>TU243236
TGCGCAGGTAGAGTGGGGGAGGTGATAAGAAGGCAGAGTGAAGGAACAGAGGCACATGGAGATCACACCAGCAACACACTATCACCTGGTTTTGCCAGAAGCAGATCCACAGGGATAAAAGAGGCAGAGCTGGCAGGTGATTTGACTTAATGAAACCCACCACCTGTTAGTCATCAAATGAGCTGCAGGCCTCAGTCTGAGTCCTGACCTCTGACTACATGTTGCATCTGCTCCTCACTGCTCTTCTATTTGCTGAATCCTCTAAAATGTCAACTCCAGTCCTTTTACAGGAAGCTGACAAAGATGACTGGATCTCCAGGAATACTCATTACATGGCGTCTAACCCAGAGACTTTACACGGGCTGATGTCCAAGAACAATGCAGTAGTGGTGGGAGACATGGTGTTGCCACCGGTCGGAAAGATGCCATCCTCTCTGCTATGGTGATGCTGTCCAGACCCACCTGTGTCCTTCTACAAGCAAACCTCTGAGACGGATTACCTGCAGATGAGACAGGACTTGTGtgctttgagttttctcccagtgcagacatcacaggccacatcttcagctccagcatagcagtgatcagcaggagcagcttggagtccagtattcttcagctcctccactaaaactgctaacatggtgtttttcagcaggacaggcctcggtgtgaacATCTTCCTGCACGGAGGGTAGCTGTACTTATGATCCTCTTCATCCCAGTGgttttaatacagttcatgcaaTAGTTGTCCACAGGGAGTAGTCACCACATCCTTCAGTAGATTGAGACAGATGGAACATGAGAAGATTTCTCTGTCCAGCTGAACTCGtttctgcgccatttcacctctcaCTCAGTGACTACTGTCTGAGTCTCACTTCCTGAGAAGTAAAACTAGTTTGAGCTCCAATGTAAAAACGGCAGTGATACAACGTTGTACTTCCCCAGTATGTTGGTTACACCCATCTGCAAACTAGATCTGAAGGGGAGGGAACAAGGAAATATGTGCAGAGTGGAGCGGTCTGTGTTTGAGAGCAGGAAGAGGAGCAAGGGGTTATCAAGCTTTGTTCCTTCCTGGAAGAGGAGCGCTTTGAGAgagatactgtgtgtgttgcaaTGCCCATACTACAATTGGTATGATAGGAAAGATTTAATATATCCCAATACTTAGTATATCAAATTCAGTACGCCAAACATCATTACCACTTCAGGGAAAGTTGTACATTTACAgacatagttaaaaaaaaatatatactttatatccATGATTTATCAGTATTTATCCTCCATCCTAATGACACCTTTTTAAGCATGTTTACACTGGACTACAGCCTGTTAGTCAAACAAATGCATTCTTTTACTGATAAATTACTGGTCCTTTTTACACTAGCCTTCTTGTAAACTGCTACACCCACTTCATGCGGTATTTTACATTAACTTGTATTTTgtaatttgtttatttcttatgtattctgcatgtgtgtgtgaagaacTTTGTAACTGCACTAACTTGTTTTTCAAAAATGCTCTGTAAATAGTGTTACTTTTACTGCAGCGACTGATGTACATTCCTCTATTGAAACGCTCCAACACACCCTAAAACTCTGAACAAGTGATAGAAAACTCTGCTCATTTCTCTGACAAAGTAGTTTTAGTGAGGAAAATTGAAAGGACAGACTGCCTGACTCTAAACATGAATACTGTACtttgtggtgtttcaggaggaaAAGTTCCTTGGTTAAAGTCTTTTAACGAAAACTCGTAGAATGCCTAACTCTAACAGCTTTATATCATGTCAACTCTAACTGCTTTTAACACATTCTtaacatttttcaattttttttctccaacccAATTAACACTTTTATAGTACTTTTAACCCATATCTCAAAGGTATTTGAAGTAGTGAAATTTGGCGGGCAATGTACGAGCTGCCGTGGCCCCTGTAGGTTTACTGGTATTCTTAGTTAGGACACACTTCAGAGCCATAATATCCTGCTTAGTAGTGAAGTGAAATGTTACCTTTCAGTAGTTGACTATATTTCTGAAGTCATGTTGGCCTGCTGTtacattaatgtgtatgttgcacTCACTCGCACTGTTTCCGTGTGCCACTGCCAAGATTCAATGTTACCTTGTtagtatgatttttttttttgattttttttt
>TU243237
TGCGCAGGTAGAGTGGGGGAGGTGATAAGAAGGCAGAGTGAAGGAACAGAGGCACATGGAGATCACACCAGCAACACACTATCACCTGGTTTTGCCAGAAGCAGGAGCTGTGTTTTCAGATCCACAGGGATAAAAGAGGCAGAGCTGGCAGGTGATTTGACTTAATGAAACCCACCACCTGTTAGTCATCAAATGAGCTGCAGGCCTCAGTCTGAGTCCTGACCTCTGACTACATGTTGCATCTGCTCCTCACTGCTCTTCTATTTGCTGAATCCTCTAAAATGTCAACTCCAGTCCTTTTACAGGAAGCTGACAAAGATGACTGGATCTCCAGGAATACTCATTACATGGCGTCTAACCCAGAGACTTTACACGGGCTGATGTCCAAGAACAATGCAGTAGTGGTGGGAGACATGGTGTTGCCACCGGTCGGAAAGATGCCATCCTCTCTGCTATGGTGATGCTGTCCAGACCCACCTGTGTCCTTCTACAAGCAAACCTCTGAGACGGATTACCTGCAGATGAGACAGGACTTGTGtgctttgagttttctcccagtgcagacatcacaggccacatcttcagctccagcatagcagtgatcagcaggagcagcttggagtccagtattcttcagctcctccactaaaactgctaacatggtgtttttcagcaggacaggcctcggtgtgaacATCTTCCTGCACGGAGGGTAGCTGTACTTATGATCCTCTTCATCCCAGTGgttttaatacagttcatgcaaTAGTTGTCCACAGGGAGTAGTCACCACATCCTTCAGTAGATTGAGACAGATGGAACATGAGAAGATTTCTCTGTCCAGCTGAACTCGtttctgcgccatttcacctctcaCTCAGTGACTACTGTCTGAGTCTCACTTCCTGAGAAGTAAAACTAGTTTGAGCTCCAATGTAAAAACGGCAGTGATACAACGTTGTACTTCCCCAGTATGTTGGTTACACCCATCTGCAAACTAGATCTGAAGGGGAGGGAACAAGGAAATATGTGCAGAGTGGAGCGGTCTGTGTTTGAGAGCAGGAAGAGGAGCAAGGGGTTATCAAGCTTTGTTCCTTCCTGGAAGAGGAGCGCTTTGAGAgagatactgtgtgtgttgcaaTGCCCATACTACAATTGGTATGATAGGAAAGATTTAATATATCCCAATACTTAGTATATCAAATTCAGTACGCCAAACATCATTACCACTTCAGGGAAAGTTGTACATTTACAgacatagttaaaaaaaaatatatactttatatccATGATTTATCAGTATTTATCCTCCATCCTAATGACACCTTTTTAAGCATGTTTACACTGGACTACAGCCTGTTAGTCAAACAAATGCATTCTTTTACTGATAAATTACTGGTCCTTTTTACACTAGCCTTCTTGTAAACTGCTACACCCACTTCATGCGGTATTTTACATTAACTTGTATTTTgtaatttgtttatttcttatgtattctgcatgtgtgtgtgaagaacTTTGTAACTGCACTAACTTGTTTTTCAAAAATGCTCTGTAAATAGTGTTACTTTTACTGCAGCGACTGATGTACATTCCTCTATTGAAACGCTCCAACACACCCTAAAACTCTGAACAAGTGATAGAAAACTCTGCTCATTTCTCTGACAAAGTAGTTTTAGTGAGGAAAATTGAAAGGACAGACTGCCTGACTCTAAACATGAATACTGTACtttgtggtgtttcaggaggaaAAGTTCCTTGGTTAAAGTCTTTTAACGAAAACTCGTAGAATGCCTAACTCTAACAGCTTTATATCATGTCAACTCTAACTGCTTTTAACACATTCTtaacatttttcaattttttttctccaacccAATTAACACTTTTATAGTACTTTTAACCCATATCTCAAAGGTATTTGAAGTAGTGAAATTTGGCGGGCAATGTACGAGCTGCCGTGGCCCCTGTAGGTTTACTGGTATTCTTAGTTAGGACACACTTCAGAGCCATAATATCCTGCTTAGTAGTGAAGTGAAATGTTACCTTTCAGTAGTTGACTATATTTCTGAAGTCATGTTGGCCTGCTGTtacattaatgtgtatgttgcacTCACTCGCACTGTTTCCGTGTGCCACTGCCAAGATTCAATGTTACCTTGTtagtatgattttttttatgttttttttttttttt
>TU243238
TGCGCAGGTAGAGTGGGGGAGGTGATAAGAAGGCAGAGTGAAGGAACAGAGGCACATGGAGATCACACCAGCAACACACTATCACCTGGTTTTGCCAGAAGCAGTCAACTCCAGTCCTTTTACAGGAAGCTGACAAAGATGACTGGATCTCCAGGAATACTCATTACATGGCGTCTAACCCAGAGACTTTACACGGGCTGATGTCCAAGAACAATGCAGTAGTGGTGGGAGACATGGTGTTGCCACCGGTCGGAAAGATGCCATCCTCTCTGCTATGGTGATGCTGTCCAGACCCACCTGTGTCCTTCTACAAGCAAACCTCTGAGACGGATTACCTGCAGATGAGACAGGACTTGTGtgctttgagttttctcccagtgcagacatcacaggccacatcttcagctccagcatagcagtgatcagcaggagcagcttggagtccagtattcttcagctcctccactaaaactgctaacatggtgtttttcagcaggacaggcctcggtgtgaacATCTTCCTGCACGGAGGGTAGCTGTACTTATGATCCTCTTCATCCCAGTGgttttaatacagttcatgcaaTAGTTGTCCACAGGGAGTAGTCACCACATCCTTCAGTAGATTGAGACAGATGGAACATGAGAAGATTTCTCTGTCCAGCTGAACTCGtttctgcgccatttcacctctcaCTCAGTGACTACTGTCTGAGTCTCACTTCCTGAGAAGTAAAACTAGTTTGAGCTCCAATGTAAAAACGGCAGTGATACAACGTTGTACTTCCCCAGTATGTTGGTTACACCCATCTGCAAACTAGATCTGAAGGGGAGGGAACAAGGAAATATGTGCAGAGTGGAGCGGTCTGTGTTTGAGAGCAGGAAGAGGAGCAAGGGGTTATCAAGCTTTGTTCCTTCCTGGAAGAGGAGCGCTTTGAGAgagatactgtgtgtgttgcaaTGCCCATACTACAATTGGTATGATAGGAAAGATTTAATATATCCCAATACTTAGTATATCAAATTCAGTACGCCAAACATCATTACCACTTCAGGGAAAGTTGTACATTTACAgacatagttaaaaaaaaatatatactttatatccATGATTTATCAGTATTTATCCTCCATCCTAATGACACCTTTTTAAGCATGTTTACACTGGACTACAGCCTGTTAGTCAAACAAATGCATTCTTTTACTGATAAATTACTGGTCCTTTTTACACTAGCCTTCTTGTAAACTGCTACACCCACTTCATGCGGTATTTTACATTAACTTGTATTTTgtaatttgtttatttcttatgtattctgcatgtgtgtgtgaagaacTTTGTAACTGCACTAACTTGTTTTTCAAAAATGCTCTGTAAATAGTGTTACTTTTACTGCAGCGACTGATGTACATTCCTCTATTGAAACGCTCCAACACACCCTAAAACTCTGAACAAGTGATAGAAAACTCTGCTCATTTCTCTGACAAAGTAGTTTTAGTGAGGAAAATTGAAAGGACAGACTGCCTGACTCTAAACATGAATACTGTACtttgtggtgtttcaggaggaaAAGTTCCTTGGTTAAAGTCTTTTAACGAAAACTCGTAGAATGCCTAACTCTAACAGCTTTATATCATGTCAACTCTAACTGCTTTTAACACATTCTtaacatttttcaattttttttctccaacccAATTAACACTTTTATAGTACTTTTAACCCATATCTCAAAGGTATTTGAAGTAGTGAAATTTGGCGGGCAATGTACGAGCTGCCGTGGCCCCTGTAGGTTTACTGGTATTCTTAGTTAGGACACACTTCAGAGCCATAATATCCTGCTTAGTAGTGAAGTGAAATGTTACCTTTCAGTAGTTGACTATATTTCTGAAGTCATGTTGGCCTGCTGTtacattaatgtgtatgttgcacTCACTCGCACTGTTTCCGTGTGCCACTGCCAAGATTCAATGTTACCTTGTtagtatgatttttttttttgattttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243235 True 2231 lncRNA 0.41 5 31905079 31913125
TU243236 False 2178 lncRNA 0.42 7 31868080 31913125
TU243237 False 2197 lncRNA 0.42 7 31891812 31913125
TU243238 False 2013 lncRNA 0.41 6 31868080 31913125

Neighbor

gene id symbol gene type direction distance location
zcchc9 zcchc9,LOC102776123 coding downstream 73959 31786430 ~ 31794121 (-)
xrcc4 NA coding downstream 96826 31717915 ~ 31771254 (-)
LOC120545145 vcan coding downstream 154306 31662472 ~ 31713774 (-)
cetn3 cetn3 coding downstream 290304 31570678 ~ 31577776 (-)
LOC120545153 LOC103375381 coding downstream 358552 31490547 ~ 31509528 (-)
LOC120545692 LOC101480093 coding upstream 77371 31990496 ~ 31992816 (-)
LOC120545706 LOC106676976 coding upstream 86579 31999704 ~ 32002253 (-)
actr1b LOC103372992,LOC108231047,LOC106524406,LOC100691670,LOC102228756,LOC107104695,LOC101074115 coding upstream 337784 32250909 ~ 32275666 (-)
stc1l LOC103372998 coding upstream 482131 32395256 ~ 32398673 (-)
LOC120545695 LOC103389350,LOC103373000,LOC101073739 coding upstream 493241 32406366 ~ 32438988 (-)
G179603 NA non-coding downstream 35217 31832555 ~ 31832863 (-)
G179551 NA non-coding downstream 84423 31783415 ~ 31783657 (-)
G179546 NA non-coding downstream 110277 31757286 ~ 31757803 (-)
G179548 NA non-coding downstream 120770 31746653 ~ 31747310 (-)
G179545 NA non-coding downstream 183601 31683202 ~ 31684479 (-)
G179629 NA non-coding upstream 65226 31978351 ~ 31986812 (-)
G179661 NA non-coding upstream 103067 32016192 ~ 32016472 (-)
G179665 NA non-coding upstream 144374 32057499 ~ 32057702 (-)
G179671 NA non-coding upstream 159817 32072942 ~ 32073816 (-)
G179675 NA non-coding upstream 166030 32079155 ~ 32081798 (-)
G179540 NA other downstream 252662 31614767 ~ 31615418 (-)
grk3 grk3,LOC107396329,LOC107101402 other downstream 780682 30970059 ~ 31087398 (-)
LOC120544905 LOC103372244,LOC108245379,LOC101072387 other downstream 1300050 30532888 ~ 30568030 (-)
G179135 NA other downstream 1532344 30328395 ~ 30335736 (-)
polm polm other downstream 1814856 30039560 ~ 30053224 (-)
LOC120545078 LOC108242566,LOC106513792 other upstream 95513 32008638 ~ 32039414 (-)
G179676 NA other upstream 170243 32083368 ~ 32085329 (-)
G179746 NA other upstream 359178 32272303 ~ 32279386 (-)
LOC120545733 LOC106530903,LOC101466162,LOC102799643,LOC108242569,LOC107395286 other upstream 739636 32652761 ~ 32671947 (-)
dusp11 LOC107080835 other upstream 764864 32677989 ~ 32689245 (-)

Expression


Co-expression Network