G179615 (LOC106675582)


Basic Information

Item Value
gene id G179615
gene name LOC106675582
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 31901718 ~ 31970119 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU243243
agcttcttcagctcagcgtctttcctcttcagctcagtgatctcctgctccagcttctcctgaagctctttgactcgactcacttcacttttctgctgggatctgacctgctgcttcacatcagagcttcttttctccaggagacggatcagctcagtgaagatcttctcactgtcctccactgctttatcagcagagcgattgatggcctccgcctgctgttgaagcagcttcacatctttctctctgtcctggattctctgctggatgttttgtcgactcccctcgagctctctctgcctctcagctctctctcccgcagctgagactgtgtcgtggcctttatgttcctccacagagcggagataacagataagctgatgatcagtacggcagaacatcttcatcacctcatcatgacgagagcagacgttctcctggagcttcttggacggctccaccagcttgtgtttcttgaaTGTCTCTGATTCATAATGAAACTGAAGGTGTTTCTCACAGAAAGAAGCCAGACATTGCAGACAGGACTTGTGtgctttgagttttctcccagtgcagacatcacaggcca

Function

NR:

description
tripartite motif-containing protein 16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243243 True 589 lncRNA 0.50 2 31901718 31970119

Neighbor

gene id symbol gene type direction distance location
LOC120545681 LOC106675582 coding downstream 10084 31884192 ~ 31891634 (-)
LOC120545683 NA coding downstream 18535 31876357 ~ 31883183 (-)
zcchc9 zcchc9,LOC102776123 coding downstream 107597 31786430 ~ 31794121 (-)
xrcc4 NA coding downstream 130464 31717915 ~ 31771254 (-)
LOC120545145 vcan coding downstream 187944 31662472 ~ 31713774 (-)
LOC120545692 LOC101480093 coding upstream 20377 31990496 ~ 31992816 (-)
LOC120545706 LOC106676976 coding upstream 29585 31999704 ~ 32002253 (-)
actr1b LOC103372992,LOC108231047,LOC106524406,LOC100691670,LOC102228756,LOC107104695,LOC101074115 coding upstream 280790 32250909 ~ 32275666 (-)
stc1l LOC103372998 coding upstream 425137 32395256 ~ 32398673 (-)
LOC120545695 LOC103389350,LOC103373000,LOC101073739 coding upstream 436247 32406366 ~ 32438988 (-)
G179608 NA non-coding downstream 28253 31860076 ~ 31873465 (-)
G179603 NA non-coding downstream 68855 31832555 ~ 31832863 (-)
G179551 NA non-coding downstream 118061 31783415 ~ 31783657 (-)
G179546 NA non-coding downstream 143915 31757286 ~ 31757803 (-)
G179548 NA non-coding downstream 154408 31746653 ~ 31747310 (-)
G179629 NA non-coding upstream 8232 31978351 ~ 31986812 (-)
G179661 NA non-coding upstream 46073 32016192 ~ 32016472 (-)
G179665 NA non-coding upstream 87380 32057499 ~ 32057702 (-)
G179671 NA non-coding upstream 102823 32072942 ~ 32073816 (-)
G179675 NA non-coding upstream 109036 32079155 ~ 32081798 (-)
G179540 NA other downstream 286300 31614767 ~ 31615418 (-)
grk3 grk3,LOC107396329,LOC107101402 other downstream 814320 30970059 ~ 31087398 (-)
LOC120544905 LOC103372244,LOC108245379,LOC101072387 other downstream 1333688 30532888 ~ 30568030 (-)
G179135 NA other downstream 1565982 30328395 ~ 30335736 (-)
polm polm other downstream 1848494 30039560 ~ 30053224 (-)
LOC120545078 LOC108242566,LOC106513792 other upstream 38519 32008638 ~ 32039414 (-)
G179676 NA other upstream 113249 32083368 ~ 32085329 (-)
G179746 NA other upstream 302184 32272303 ~ 32279386 (-)
LOC120545733 LOC106530903,LOC101466162,LOC102799643,LOC108242569,LOC107395286 other upstream 682642 32652761 ~ 32671947 (-)
dusp11 LOC107080835 other upstream 707870 32677989 ~ 32689245 (-)

Expression


Co-expression Network