G179753


Basic Information

Item Value
gene id G179753
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 32444118 ~ 32446914 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU243460
ctggctaATATACAggacagtatacccactacaatacgttagactacaccactggttttGAATCAgaaaactttattgatcccagcTCAGTTTTCGCTGCAACGccttaaaagaaaatctgtagGCTGCATAGTTGTAAaagtttacacttttttttcgcCGTTTCTGTCACATATTTGGCCTTTACATCATTTGGGGAAATCATGGCAGTTGGAACCACggttgctgctttttttttgacgtttttgacgtttttttgacgcttttttcatGGTTTTCTaggtttttgacgctttttcgTGTGTCCGGACTGCTGCAGTTGCTCACAGTGACAGTCAAACATAAGACCGAAATACAAGTAAGGAAAAAATAGTCAAAAAGAGTGCAAAGTTATATAGCTAAAGtgcaaaaaattataaaaagtaaaTTAAGATAAGTTTAAAAGATGATGTTGTCATACACTGgattgttcaaatgtttttgaaTCATAATCTATGCAGGACTGTTGCTTTAATGACATCTCCAGCCTGAGCTAATGCGCGTACAGAACTCCATAGAAGAATGTTACATTTTAAGAGTTTCGTGCACGTAGCCAAGCACGCACACGTGCCAGGTTCAAACCTGCGACCAGTTTGGAACAAGACCGACGTTGTGGTGAATTCGGCTTGCACGTAATCCACCTGCTGAGTCCTCCTTACCATACATTCTCACCTGTCAAACCACTTCCTCTTCGTCTCTGCCTCCGTTCTCGGTCTGTTTTACCGGAGAAAGTGACAAGATTTTCTCCGGTCCGGTGAAAGGGGGGTCTGGTTTTTGTACAATGCAACTTCTAGTGCTAATCATATGAGCAGTAAACATGAATTCAGTCCGTTTCAATAACAAAATGAGTAGGCCTATGTATGTGAACGCAGATCTGCACTCACAGATGAACATCTACACTGTACTTATGAGACAAAAACGCACAATTTAGGCTTTTCTTTGTACATAAAGAGCTCCATAAATCATGTTCTACTTTACAGAATCAAGCATCTACTTATagactctttttttaatttatttcttaTTATCATTTAAGcggacacacccacacaaataaAGGTATGACACGCGCCACACACTGTGTGGACGAGGACGATGTTCCACCTATCCTAAAATAGACATGATATTGTTGTGTTGCTCTGAAACTAAACAggggggtgtgggtgggggATGAATAATGAATAATGATCGGTCATCCAGCGCCCTCTGCTGGTCTCACCACGGAGATGTCTTCATAGTCATAGAAAGTAGTTTCcccacacattttcaaaactcctCCAGGCCTTTTCAAAAGGACactacaatatataaatatatcccaTGGCCACTCAGAACCATAAGCATCGtcttgtcttcccgtcaaccatgaGACAAAACAACACtagctttttttattattattttttaacccttgtcgtcttcccgtcgaccgtgCAACTTTGTGAttttctgggtcgaaatttccactttttcttgttctttttctacacttttctctagctttttgtcgattttattccaattttggaataatgttttttttttcactttacccCCCAATTTATTAgcgtttttttaattgtttttgtcaattttttaatacgtttttttttcgctttttcaatttttttgggcgtttaaattgtttttgtcaatttttttatgttttttcccattttttgtgtcacttttttttttactatgttcttgtcaatttttttgtcgctttttgtcACCTATGGCGATGTTTTTGATGgggttttttgtcactttttccagtttttttcttcttttctttttccccctgcgtttttgtcattcttttgtcatagttctgataaagaaagtttattttaatttaaatttgacccgaggacaacaggagggttaaacacaaacacaactgtcCAGTGTAACTTGACTCCAAAAATGTGAATTATCGTACGAAAAACTAAACAGCAATCTGTTTCCATCTCCAATAGTTAGTTTGGTTTATTTGAGACTTTTGTTCACCTCCCTGTCAGGCAGGCTGACGATGGACCAAAAATATTTATAACACACATTCAAACGTTCTGGGTCCCCACACACACTGTTCCATGACTTTAAGGGCCTACAATACCATTTCCATTTGGAACCTTAAACACCAACAGACCTTGAGTCCAGAAAACTGAGtccagaaaatattcacatcacATTTTCTCAAACTACGGTCTGAAAAACAAGGCGGCAACGGCATCGTCACACGGTACCAGCTGCCCGTTGCTCAGACTTGCCCTTCTCTTCAATGCTCACAGTTTGAGCCAGTGTCCCCAGATTGAGGAGGACCAGAGGGTGGGACATGGTCCCgaacgtgcgtgcgtgcgtgcggcgGGCGTCACTGGGAAACCGGCGGGCCGAACATCTCCATGGTCTCCGCGACCAGCGCCAGGTGGTCCAGAAACGAGCTCACGGACACTCGGAGGATCCGAGCCTCCTCGGCGCTCCACCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243460 True 2529 lncRNA 0.41 2 32444118 32446914

Neighbor

gene id symbol gene type direction distance location
LOC120545695 LOC103389350,LOC103373000,LOC101073739 coding downstream 5130 32406366 ~ 32438988 (-)
stc1l LOC103372998 coding downstream 45445 32395256 ~ 32398673 (-)
actr1b LOC103372992,LOC108231047,LOC106524406,LOC100691670,LOC102228756,LOC107104695,LOC101074115 coding downstream 168452 32250909 ~ 32275666 (-)
LOC120545706 LOC106676976 coding downstream 441865 31999704 ~ 32002253 (-)
LOC120545692 LOC101480093 coding downstream 451302 31990496 ~ 31992816 (-)
wdr45 wdr45,LOC102779567 coding upstream 10406 32457320 ~ 32470155 (-)
LOC120545709 NA coding upstream 91596 32538510 ~ 32545567 (-)
LOC120545080 LOC104959728 coding upstream 260717 32707631 ~ 32718404 (-)
LOC120545082 LOC101480093 coding upstream 305509 32752423 ~ 32754563 (-)
trappc1 trappc1 coding upstream 487330 32934244 ~ 32940290 (-)
G179778 NA non-coding downstream 31530 32411350 ~ 32412588 (-)
G179757 NA non-coding downstream 64885 32284048 ~ 32379233 (-)
G179773 NA non-coding downstream 85032 32358717 ~ 32359086 (-)
G179764 NA non-coding downstream 89034 32311298 ~ 32355084 (-)
G179769 NA non-coding downstream 100847 32341918 ~ 32343271 (-)
G179782 NA non-coding upstream 838 32447752 ~ 32448598 (-)
G179783 NA non-coding upstream 16090 32463004 ~ 32463511 (-)
G179785 NA non-coding upstream 38176 32485090 ~ 32486214 (-)
G179790 NA non-coding upstream 81336 32528250 ~ 32528481 (-)
G179803 NA non-coding upstream 106760 32553674 ~ 32557650 (-)
G179746 NA other downstream 164732 32272303 ~ 32279386 (-)
G179676 NA other downstream 358789 32083368 ~ 32085329 (-)
LOC120545078 LOC108242566,LOC106513792 other downstream 404704 32008638 ~ 32039414 (-)
G179540 NA other downstream 828700 31614767 ~ 31615418 (-)
grk3 grk3,LOC107396329,LOC107101402 other downstream 1356720 30970059 ~ 31087398 (-)
LOC120545733 LOC106530903,LOC101466162,LOC102799643,LOC108242569,LOC107395286 other upstream 205847 32652761 ~ 32671947 (-)
dusp11 LOC107080835 other upstream 231075 32677989 ~ 32689245 (-)
LOC120545708 NA other upstream 267174 32714088 ~ 32736568 (-)
G179923 LOC106675582 other upstream 270933 32717847 ~ 32851610 (-)
LOC120545725 NA other upstream 343781 32790695 ~ 32851925 (-)

Expression


Co-expression Network