G179954


Basic Information

Item Value
gene id G179954
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 32947392 ~ 32948152 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU243757
tcccagtgtgtgtgtagtgtgtgtgtagagtgtgtagtgtgtgtagtagtACCTGCCCACCCTTCCTGCGgtcctagtgtgtgtgtagtgtgtgtataatggtcccagtgtgtgtgtagtgtgtgtgtagagtgtgtagtgtgtgtagtagtACCTGCCCACCCTTCCTGCggtcccagtgtgtgttgtgtgtgtataatggtcccagtgtgtgtgtagtgtgtgtgtgtagagtgtgtagtgtgtgtagtagtACCTGCCCACCCTTCCTGCggtcccagtgtgtgtgtagtgtgtataatggtcccagtgtgtgtgtagtgtgtgtagTAGTACCTGCCCCCCCTTCCTGCGGTCCCATCCAGCCACCAGGATCCCTGCACTCAGCTCCTCTCTGTAGCGGTAGCAGCTAGCTTTGAACAGATTGGCTGCTGTCTCCACCAATGGGGGCTCATCTAGCTCAATGCTGGGGGCGGGACATAAACAGGAAGAGATTAACCACACTggctctgggtgtgtgtctgtgtgtgtgttacctgtgtgtgtgtgtgtgtgtctgtgtgtgt
>TU243758
tcccagtgtgtgtgtagtgtgtgtgtagagtgtgtagtgtgtgtagtagtACCTGCCCACCCTTCCTGCGgtcctagtgtgtgtgtagtgtgtgtataatggtcccagtgtgtgtgtagtgtgtgtgtagagtgtgtagtgtgtgtagtagtACCTGCCCACCCTTCCTGCggtcccagtgtgtgtgtagtgtgtataatggtcccagtgtgtgtgtagtgtgtgtgtgtagagtgtgtagtgtgtgtagtagtACCTGCCCACCCTTCCTGCggtcccagtgtgtgttgtgtgtgtataatggtcccagtgtgtgtgtagtgtgtgtgtgtagagtgtgtagtgtgtgtagtagtACCTGCCCACCCTTCCTGCggtcccagtgtgtgtgtagtgtgtataatggtcccagtgtgtgtgtagtgtgtgtataatggtcccagtgtgtgtgtagtgtgtgtagagtgtgtagTAGTACCTGCCCCCCCTTCCTGCGGTCCCATCCAGCCACCAGGATCCCTGCACTCAGCTCCTCTCTGTAGCGGTAGCAGCTAGCTTTGAACAGATTGGCTGCTGTCTCCACCAATGGGGGCTCATCTAGCTCAATGCTGGGGGCGGGACATAAACAGGAAGAGATTAACCACACTggctctgggtgtgtgtctgtgtgtgtgttacctgtgtgtgtgtgtgtgtgtctgtgtgtgt
>TU243759
tcccagtgtgtgtgtagtgtgtgtgtagagtgtgtagtgtgtgtagtagtACCTGCCCACCCTTCCTGCGgtcctagtgtgtgtgtagtgtgtgtataatggtcccagtgtgtgtgtagtgtgtgtgtagagtgtgtagtgtgtgtagtagtACCTGCCCACCCTTCCTGCggtcccagtgtgtgtgtagtgtgtataatggtcccagtgtgtgtgtagtgtgtgtagTAGTACCTGCCCCCCCTTCCTGCGGTCCCATCCAGCCACCAGGATCCCTGCACTCAGCTCCTCTCTGTAGCGGTAGCAGCTAGCTTTGAACAGATTGGCTGCTGTCTCCACCAATGGGGGCTCATCTAGCTCAATGCTGGGGGCGGGACATAAACAGGAAGAGATTAACCACACTggctctgggtgtgtgtctgtgtgtgtgttacctgtgtgtgtgtgtgtgtgtctgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243757 False 566 lncRNA 0.53 3 32947392 32948152
TU243758 True 708 lncRNA 0.52 3 32947392 32948152
TU243759 False 464 lncRNA 0.53 2 32947392 32948152

Neighbor

gene id symbol gene type direction distance location
trappc1 trappc1 coding downstream 7102 32934244 ~ 32940290 (-)
LOC120545082 LOC101480093 coding downstream 192829 32752423 ~ 32754563 (-)
LOC120545080 LOC104959728 coding downstream 228988 32707631 ~ 32718404 (-)
LOC120545709 NA coding downstream 401825 32538510 ~ 32545567 (-)
wdr45 wdr45,LOC102779567 coding downstream 477237 32457320 ~ 32470155 (-)
LOC120545084 NA coding upstream 1890 32950042 ~ 32955431 (-)
helq helq coding upstream 61564 33009716 ~ 33102359 (-)
LOC120545728 NA coding upstream 168140 33116292 ~ 33121675 (-)
gpat3 gpat3 coding upstream 215445 33163597 ~ 33190017 (-)
LOC120545723 NA coding upstream 309402 33257554 ~ 33263566 (-)
G179935 NA non-coding downstream 128792 32813068 ~ 32818600 (-)
LOC120545738 NA non-coding downstream 182106 32765025 ~ 32765286 (-)
G179917 LOC106675582 non-coding downstream 237590 32691226 ~ 32709802 (-)
G179916 NA non-coding downstream 269920 32675201 ~ 32677472 (-)
G179812 NA non-coding downstream 312716 32634402 ~ 32634676 (-)
G179953 NA non-coding upstream 224 32948376 ~ 32948882 (-)
G179952 NA non-coding upstream 896 32949048 ~ 33008003 (-)
G179955 NA non-coding upstream 11374 32959526 ~ 32961547 (-)
G179969 NA non-coding upstream 57407 33005559 ~ 33007018 (-)
G179966 NA non-coding upstream 70517 33018669 ~ 33111051 (-)
LOC120545725 NA other downstream 95467 32790695 ~ 32851925 (-)
G179923 LOC106675582 other downstream 95782 32717847 ~ 32851610 (-)
LOC120545708 NA other downstream 210824 32714088 ~ 32736568 (-)
dusp11 LOC107080835 other downstream 258147 32677989 ~ 32689245 (-)
LOC120545733 LOC106530903,LOC101466162,LOC102799643,LOC108242569,LOC107395286 other downstream 275445 32652761 ~ 32671947 (-)
LOC120545085 NA other upstream 9699 32957851 ~ 32968150 (-)
hpse NA other upstream 44223 32992375 ~ 33004529 (-)
LOC120545720 NA other upstream 145917 33094069 ~ 33096229 (-)
LOC120545090 NA other upstream 356462 33304614 ~ 33678810 (-)
G180628 NA other upstream 463951 33412103 ~ 33412619 (-)

Expression


Co-expression Network