LOC120545085


Basic Information

Item Value
gene id LOC120545085
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 32957851 ~ 32968150 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU243761
GAATGTGAAGGTTTTTCCAGCGTTGGTGACTCCGTACGTGAACACCAGACAGTTTCCTCCCCCCAGAACGTCTCGGACCAAATCCCGAACCGAACCGTCGAACACCTTCCTCTGACTGGCCTCGGGCTCGAACACCTCCACGACACAACAGCCACAGTTCATCATCAAGGCGCCAACGTTAGGCTCAACACACGCAGTCAAACGCTCAACACACGCAGTCAAAGGCTCAACACATGCAGTCAAACGCTCAACACACGCAGTCAAAGGCTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACGCTCAACACATGCAGTCAAACGCTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACGCTCAACACATGCAGTCAAACGCTCAACACATGCAGTCAAACGCTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACGCTCAACACATGCAGTCAAAC
>XM_039779075.1
CTGGCCTCGGGCTCGAACACCTCCACGACACAACAGCCACAGTTCATCATCAAGGCGCCAACGTTAGGCTCAACACACGCAGTCAAACGCTCAACACACGCAGTCAAAGGCTCAACACATGCAGTCAAACGCTCAACACACGCAGTCAAAGGCTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACGCTCAACACATGCAGTCAAACGCTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACGCTCAACACATGCAGTCAAACGCTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAGTCAAACACTCAACACATGCAatccatccttccatccattactctatccatccttccatccattACTCTATCCATCCCTTCATCCATTACTCTATCCATCCTTTCATCCATTACTCTATCCATCCCTTCATCCATTACTCTACCCATCCCTTCATCCATTACTCtatccatccttccatccattACTCTATCCATCCCTTCATCCATTACTCtatTTACTCTGTCCATCTTTTCATCCATTACTCTATCCATCCTTTCATCCATTACTCTATC

Function

GO:

id name namespace
GO:0044464 obsolete cell part cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243761 True 707 TUCP 0.48 2 32967295 32968150
XM_039779075.1 False 669 mRNA 0.45 3 32957851 32968035

Neighbor

gene id symbol gene type direction distance location
LOC120545084 NA coding downstream 2420 32950042 ~ 32955431 (-)
trappc1 trappc1 coding downstream 17561 32934244 ~ 32940290 (-)
LOC120545082 LOC101480093 coding downstream 203288 32752423 ~ 32754563 (-)
LOC120545080 LOC104959728 coding downstream 239447 32707631 ~ 32718404 (-)
LOC120545709 NA coding downstream 412284 32538510 ~ 32545567 (-)
helq helq coding upstream 41566 33009716 ~ 33102359 (-)
LOC120545728 NA coding upstream 148142 33116292 ~ 33121675 (-)
gpat3 gpat3 coding upstream 195447 33163597 ~ 33190017 (-)
LOC120545723 NA coding upstream 289404 33257554 ~ 33263566 (-)
gfra2b gfra2,LOC106524419,LOC101468026,LOC102196137,LOC108242531 coding upstream 433591 33401741 ~ 33520251 (-)
G179953 NA non-coding downstream 8969 32948376 ~ 32948882 (-)
G179954 NA non-coding downstream 9699 32947392 ~ 32948152 (-)
G179935 NA non-coding downstream 139251 32813068 ~ 32818600 (-)
LOC120545738 NA non-coding downstream 192565 32765025 ~ 32765286 (-)
G179917 LOC106675582 non-coding downstream 248049 32691226 ~ 32709802 (-)
G179969 NA non-coding upstream 37409 33005559 ~ 33007018 (-)
G179966 NA non-coding upstream 50519 33018669 ~ 33111051 (-)
G179963 NA non-coding upstream 51120 33019270 ~ 33078916 (-)
G179971 LOC106675582 non-coding upstream 59859 33028009 ~ 33034415 (-)
G179962 NA non-coding upstream 140473 33108623 ~ 33117522 (-)
LOC120545725 NA other downstream 105926 32790695 ~ 32851925 (-)
G179923 LOC106675582 other downstream 106241 32717847 ~ 32851610 (-)
LOC120545708 NA other downstream 221283 32714088 ~ 32736568 (-)
dusp11 LOC107080835 other downstream 268606 32677989 ~ 32689245 (-)
LOC120545733 LOC106530903,LOC101466162,LOC102799643,LOC108242569,LOC107395286 other downstream 285904 32652761 ~ 32671947 (-)
hpse NA other upstream 24225 32992375 ~ 33004529 (-)
LOC120545720 NA other upstream 125919 33094069 ~ 33096229 (-)
LOC120545090 NA other upstream 336464 33304614 ~ 33678810 (-)
G180628 NA other upstream 443953 33412103 ~ 33412619 (-)
G180640 NA other upstream 694026 33662176 ~ 33707638 (-)

Expression


Co-expression Network