G179962


Basic Information

Item Value
gene id G179962
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 33108623 ~ 33117522 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU243767
acacacacacacacacacacacacacacacaaacacacacacacacacacacacacacacacacacacaaacacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacagacaacacacacacacacacacacacacagagagacacacacacagacacacacacacacagacacacacacacagacacacacacacagagacacacacacacacagagacacacacacagacacacacacagagacacacacacagagacacacacacagagacacacacacagagacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacagagacacacacacagacacacacacacacacacacagacacacacacacacacacacagagacacacacacacacacagaccgagacacacacacacacagagacacacagacacacacacacacagacacacacacactcagagacacacagacacacacacacagacccacacagagaccgagatacacacacacacacagagacacacacacacacacacacacagaccgagacacacagacacacacacacacacacacacacacagagaccagacacacaaacacacacacacacacagaccgagacacacacacacacagagacacacacagagaccaagacacacagacacacacatagagactgagacatacacacacagagacacacacacacacacatatagagacagacacacacacacatatatagaaacagagacacacacacatatatatatatagaaacagagacacacacacatatatatatatagaaacagagacacacacatatataaataccaagacacacacacatatagacagagacacacacacacacacatagagaccgagacacacagacactttttaTAGAGCTGGAGGTCTTAAGTTCCACAAAATGTTCATATTTAAATTGCACAAATCAATTTTCagtattgattaatctgccagTTATCTTCTTGAGTAATGGTTAGTTCTGCAAAATATCTTCTTTTGTGCTTCTTTCTattcagttcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccttaactACTGAGACACACACCAGTACTGACAGGTTTTATACATTTAATCAACAGACTGAACACCGATAACACTGATGCACTAGTCCAGATGTCTGACTGCACAGATGTTGGGATCCTTCATGAACTGTGGATGTTTGTGGGTCACCGACATGAAACCTGAAAGGGAGAAAGTGACGTGAATACACACgtatttaaatattagtttaaagTCTGTGTGCATATGCTTCTTAAAGCCATTTGTTCGGAGtggaaaaactacaacaatctttgactttggtccagtattgagcgagaaacaagctgcaatgtaacgttagcGGTTAAAACCGCACGTTtgggtccactaaaagttctgttgctgctgctgacagactcagattattattctaagtgtctgacaacattatgggatggatccctacagagatagagcttttagttaaagagtaagatccttttagtttaacatgaaacagccccgaaatcaccatcaccaaactccaccagactccatgtaaataatcaggacttttagtgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagtgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcatgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggactttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243767 True 2132 lncRNA 0.43 3 33108623 33117522

Neighbor

gene id symbol gene type direction distance location
helq helq coding downstream 6264 33009716 ~ 33102359 (-)
LOC120545084 NA coding downstream 153192 32950042 ~ 32955431 (-)
trappc1 trappc1 coding downstream 168333 32934244 ~ 32940290 (-)
LOC120545082 LOC101480093 coding downstream 354060 32752423 ~ 32754563 (-)
LOC120545080 LOC104959728 coding downstream 390219 32707631 ~ 32718404 (-)
gpat3 gpat3 coding upstream 46075 33163597 ~ 33190017 (-)
LOC120545723 NA coding upstream 140032 33257554 ~ 33263566 (-)
gfra2b gfra2,LOC106524419,LOC101468026,LOC102196137,LOC108242531 coding upstream 284219 33401741 ~ 33520251 (-)
LOC120545889 pbdc1,LOC102798581 coding upstream 566344 33683866 ~ 33685117 (-)
LOC120545887 pbdc1 coding upstream 577854 33695376 ~ 33707710 (-)
G179963 NA non-coding downstream 29707 33019270 ~ 33078916 (-)
G179971 LOC106675582 non-coding downstream 74208 33028009 ~ 33034415 (-)
G179951 NA non-coding downstream 90650 32947060 ~ 33017973 (-)
G179952 NA non-coding downstream 100620 32949048 ~ 33008003 (-)
G179969 NA non-coding downstream 101605 33005559 ~ 33007018 (-)
G179965 NA non-coding upstream 4339 33121861 ~ 33122181 (-)
G179976 NA non-coding upstream 28200 33145722 ~ 33155613 (-)
G179964 NA non-coding upstream 28424 33145946 ~ 33175367 (-)
G179977 NA non-coding upstream 31769 33149291 ~ 33193331 (-)
G179979 NA non-coding upstream 45238 33162760 ~ 33163122 (-)
LOC120545720 NA other downstream 12394 33094069 ~ 33096229 (-)
hpse NA other downstream 104094 32992375 ~ 33004529 (-)
LOC120545085 NA other downstream 140473 32957851 ~ 32968150 (-)
LOC120545725 NA other downstream 256698 32790695 ~ 32851925 (-)
G179923 LOC106675582 other downstream 257013 32717847 ~ 32851610 (-)
LOC120545090 NA other upstream 187092 33304614 ~ 33678810 (-)
G180628 NA other upstream 294581 33412103 ~ 33412619 (-)
G180640 NA other upstream 544654 33662176 ~ 33707638 (-)
G180665 NA other upstream 681760 33799282 ~ 33800420 (-)
G180765 slc25a46 other upstream 1172255 34289777 ~ 34386787 (-)

Expression


Co-expression Network