LOC120545335


Basic Information

Item Value
gene id LOC120545335
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 34910380 ~ 34911284 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU245121
tTGACTTGACACCGGTCCTCGATGATAACAGGCACCGATTCCTCTGGAAATACCGGCCAGATTCGGCATTTTCCAGCCGGTAAACCAGCAGAAATGAGAGCTAGGAGGATTTAACGGAGACTAACGGACCCGCGGGGCttgaaaaagAGATGCTGAGTCGCCCGCTGACTCGGTGTGACGACAGGGGGCGGGGCCTGACTGCGGTGACTCCGCTCCTTGCTCTCCCATTGGCTGATGAGGGTGATGacgacacagagacacaaatggGAGGttttctcccccctctctcctcccctttcccccctccc
>TU245122
tgaacCCACCGGAagtcctgtatgtgtgtgttccgtTGACTTGACACCGGTCCTCGATGATAACAGGCACCGATTCCTCTGGAAATACCGGCCAGATTCGGCATTTTCCAGCCGGTAAACCAGCAGAAATGAGAGCTAGGAGGATTTAACGGAGACTAACGGACCCGCGGGGCttgaaaaagAGATGCTGAGTCGCCCGCTGACTCGGTGTGACGACAGGGGGCGGGGCCTGACTGCGGTGACTCCGCTCCTTGCTCTCCCATTGGCTGATGAGGGTGATGacgacacagagacacaaatggGAGGttttctcccccctctctcctcccctttcccccctccc
>XR_005636659.1
gtcctgtatgtgtgtgttccgtTGACTTGACACCGGTCCTCGATGATAACAGGCACCGATTCCTCTGGAAATACCGGCCAGATTCGGCATTTTCCAGCCGGTAAACCAGCAGAAATGAGAGCTAGGAGGATTTAACGGAGACTAACGGACCCGCGGGGCttgaaaaagAGATGCTGAGTCGCCCGCTGACTCGGTGTGACGACAGGGGGCGGGGCCTGACTGCGGTGACTCCGCTCCTTGCTCTCCCATTGGCTGATGAGGGTGATGacgacacagagacacaaatggGAGGttttctcccccctctctcctcccctttcccccctccccccgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245121 False 308 lncRNA 0.57 3 34910386 34911249
TU245122 True 343 lncRNA 0.57 3 34910386 34911284
XR_005636659.1 False 335 lncRNA 0.57 3 34910380 34911270

Neighbor

gene id symbol gene type direction distance location
wu:fi75a02 NA coding downstream 313 34893172 ~ 34910067 (-)
fsd1l fsd1l coding downstream 208721 34687629 ~ 34701659 (-)
LOC120545296 NA coding downstream 453484 34445669 ~ 34456896 (-)
LOC120545303 NA coding downstream 670081 34230011 ~ 34240299 (-)
LOC120545302 NA coding downstream 725793 34182310 ~ 34184587 (-)
LOC120545270 NA coding upstream 824075 35735359 ~ 35758865 (-)
LOC120545312 NA coding upstream 938991 35850275 ~ 35853425 (-)
LOC120545279 NA coding upstream 950052 35861336 ~ 35868849 (-)
LOC120545313 NA coding upstream 995037 35906321 ~ 35920121 (-)
LOC120545315 NA coding upstream 1012069 35923353 ~ 35989212 (-)
G180831 NA non-coding downstream 7154 34901029 ~ 34903226 (-)
LOC120545337 NA non-coding downstream 68976 34834147 ~ 34841404 (-)
G180849 NA non-coding downstream 106306 34803427 ~ 34804074 (-)
G180847 NA non-coding downstream 109157 34800917 ~ 34801223 (-)
G180834 NA non-coding downstream 112477 34797383 ~ 34797903 (-)
LOC120545332 NA non-coding upstream 17692 34928976 ~ 35412309 (-)
G180860 NA non-coding upstream 42718 34954002 ~ 34955961 (-)
G180862 NA non-coding upstream 45613 34956897 ~ 34958979 (-)
LOC120545329 NA non-coding upstream 51810 34963094 ~ 34969055 (-)
G180797 NA non-coding upstream 55731 34967015 ~ 35019942 (-)
LOC120545298 NA other downstream 17311 34890745 ~ 34893069 (-)
pisd pisd other downstream 24631 34855756 ~ 34885749 (-)
LOC120545099 NA other downstream 65569 34825451 ~ 34844811 (-)
apc apc,LOC104937427,LOC106906682 other downstream 136946 34723876 ~ 34773434 (-)
ythdc1 ythdc1,LOC102794570 other downstream 230794 34611997 ~ 34679586 (-)
G180873 NA other upstream 74937 34986221 ~ 35022077 (-)
LOC120545308 NA other upstream 125411 35036695 ~ 35434861 (-)
G180944 NA other upstream 660894 35572178 ~ 35574625 (-)
LOC120545322 mocs2,LOC104936384,LOC103375245 other upstream 778470 35689754 ~ 36035923 (-)
G180916 NA other upstream 905506 35816790 ~ 36070641 (-)

Expression


Co-expression Network