fsd1l (fsd1l)


Basic Information

Item Value
gene id fsd1l
gene name fsd1l
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 34687629 ~ 34701659 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779480.1
tgtgtgacTTCACTTCTTGTCAGTgggtccgtctctctctctctctctctctctctctgtttctcaggTGATGATGGACACTCAGAAGGAAGCTCTGTGCCGGATCATCAGCACGTTGGCCAATAAGAATGAAGAGCTCCAAACCTTCCTGGAAACAGTCGACAACACACTGACGGGACTGCAGGAGGAGTCGTGTTCGGTGATGTCAGAGCTGGAGGCGGAGCTCGAGCAGCTAAGCTCTGCCTTGGAGGAGAGGGGGGCGTGGCTTCGTGACGTCATTAAAGAGGAGAAGCAGAGGAAAGAGGCAGAGCTTCAGaAGCAACTGTCGGAGGGAAAGTCGGCTGTTTTGTCGTGTGAAGAACTGCTCGAGTTCGCCAATCAGACGCTGACGATTACCAACGAAGAAGAGTTCCTGAAGgCTGCAAAACAAATCAAAGAAAGGATAACAATGGCTCCAGCGTTCCGGCTGACGACTCGTCCGGCGGTTTCGGAGAACATGTCTCAGTTTACCGTCGACTTCAGCGCCGAGAGGGCAGGGCTTCAGCGACTTCACTTCCTGTCTGTTCCCGGAGCTCCAGAGATCGACGTCTCCGGCTGCCTTGTCTGTGACAACACAGTCAGGGTTGCCTGGCAACCGGCCAGCGAGGCTGATGGCGAGGGCGAGGTCGGACGAATCGAACACTATGAACTCGAATACCGAAAAACAAACCGTGAAAGCTCGCTGAGAGCCGCAGGAGAGGCATGCTGGGAAAAAATCCCCGacatcagagacacacatgtCACCATCTCAGGTCTGAAGTTTGACTCCCGCTTCGTCATCGTTCGAGTTAGAGCGAGAAACAAAGCAGCTGCTGGCGAGTTCTCTGAGCCTGTCACCTTGGAAACCAGAGCGTATAACTTTGGGTTGGAGGCGGCGACAGCGCACGCGGAGCTGCAGGTTCGGGGCGACACGGTGACCTGGGAGCCTcagggggtcaaaggtcacgaCCCCCGcctgagaggaaaagagaacaaAAGCAGCAGCAGAAGCGCCACGCCGTCGCCCAATAAGACGGCAGGAAATCGAGCCGGACGCGACCGATTTGCCGGAGAGTCGTACACTGTGCTCGGCGACCAGGAGATGACTGGCGGCTGTCACTACTGGGAGCTCCGGCCCCTCGCTGACTGGAAGTCCTTCAGTGTGGGCGTGGCCAATCGGGCCACCCTGGGCCGCTTCGACCAATTAGGGAAGAGTTCTGGGTCCTGGTGTCTCCATGCCAGCCAATGGCTGCAGAGCTCACTCGCCGCCAAACACAACAACCGAGCCAAGGCCCTCGATTGGCCGCTGCCGCAACGAATTGGAATCTACTGCGACTATGACAACGGAGATCTATCGTTCGTCGATGTTGATCGACTTCATCTTCTTCACTCCTTCAAAACAAAGTTCAGCCAACCACTCGTCCCCGCCTTCACCGTCTGTACCACGCTATTATTCCCCAATATTCCCCATTATTACCCAATATTCCCCATTATTATCCAGTATTCCCCAATATTCTCCGGTATTCACCAATATTACCCATTATTACCCAATATTACTGAATGGTCCCCATTATTACCCGATATTCCCCATTATTACCAAATATTCCCCAATAttacccaatatttcagtttcaaCTCCACGCtgattaataataaatattaatggAAATCTCATAATACTATAAAATAATCACCAACTGGCCTCCAAAAATCAAGTCTGTTCTTTGggcttttaatattatttaagataagataagatagactttattaatcccacactgggga
>XM_039779481.1
tgtgtgacTTCACTTCTTGTCAGTgggtccgtctctctctctctctctctctctctctgtttctcaggTGATGATGGACACTCAGAAGGAAGCTCTGTGCCGGATCATCAGCACGTTGGCCAATAAGAATGAAGAGCTCCAAACCTTCCTGGAAACAGTCGACAACACACTGACGGGACTGCAGGAGGAGTCGTGTTCGGTGATGTCAGAGCTGGAGGCGGAGCTCGAGCAGCTAAGCTCTGCCTTGGAGGAGAGGGGGGCGTGGCTTCGTGACGTCATTAAAGAGGAGAAGCAGAGGAAAGAGGCAGAGCTTCAGaAGCAACTGTCGGAGGGAAAGTCGGCTGTTTTGTCGTGTGAAGAACTGCTCGAGTTCGCCAATCAGACGCTGACGATTACCAACGAAGAAGAGTTCCTGAAGgCTGCAAAACAAATCAAAGAAAGGATAACAATGGCTCCAGCGTTCCGGCTGACGACTCGTCCGGCGGTTTCGGAGAACATGTCTCAGTTTACCGTCGACTTCAGCGCCGAGAGGGCAGGGCTTCAGCGACTTCACTTCCTGTCTGTTCCCGGAGCTCCAGAGATCGACGTCTCCGGCTGCCTTGTCTGTGACAACACAGTCAGGGTTGCCTGGCAACCGGCCAGCGAGGCTGATGGCGAGGGCGAGGTCGGACGAATCGAACACTATGAACTCGAATACCGAAAAACAAACCGTGAAAGCTCGCTGAGAGCCGCAGGAGAGGCATGCTGGGAAAAAATCCCCGacatcagagacacacatgtCACCATCTCAGGTCTGAAGTTTGACTCCCGCTTCGTCATCGTTCGAGTTAGAGCGAGAAACAAAGCAGCTGCTGGCGAGTTCTCTGAGCCTGTCACCTTGGAAACCAGAGCGTATAACTTTGGGTTGGAGGCGGCGACAGCGCACGCGGAGCTGCAGGTTCGGGGCGACACGGTGACCTGGGAGCCTcagggggtcaaaggtcacgaCCCCCGcctgagaggaaaagagaacaaAAGCAGCAGAAGCGCCACGCCGTCGCCCAATAAGACGGCAGGAAATCGAGCCGGACGCGACCGATTTGCCGGAGAGTCGTACACTGTGCTCGGCGACCAGGAGATGACTGGCGGCTGTCACTACTGGGAGCTCCGGCCCCTCGCTGACTGGAAGTCCTTCAGTGTGGGCGTGGCCAATCGGGCCACCCTGGGCCGCTTCGACCAATTAGGGAAGAGTTCTGGGTCCTGGTGTCTCCATGCCAGCCAATGGCTGCAGAGCTCACTCGCCGCCAAACACAACAACCGAGCCAAGGCCCTCGATTGGCCGCTGCCGCAACGAATTGGAATCTACTGCGACTATGACAACGGAGATCTATCGTTCGTCGATGTTGATCGACTTCATCTTCTTCACTCCTTCAAAACAAAGTTCAGCCAACCACTCGTCCCCGCCTTCACCGTCTGTACCACGCTATTATTCCCCAATATTCCCCATTATTACCCAATATTCCCCATTATTATCCAGTATTCCCCAATATTCTCCGGTATTCACCAATATTACCCATTATTACCCAATATTACTGAATGGTCCCCATTATTACCCGATATTCCCCATTATTACCAAATATTCCCCAATAttacccaatatttcagtttcaaCTCCACGCtgattaataataaatattaatggAAATCTCATAATACTATAAAATAATCACCAACTGGCCTCCAAAAATCAAGTCTGTTCTTTGggcttttaatattatttaagataagataagatagactttattaatcccacactgggga
>XM_039779482.1
tgtgtgacTTCACTTCTTGTCAGTgggtccgtctctctctctctctctctctctctctgtttctcaggTGATGATGGACACTCAGAAGGAAGCTCTGTGCCGGATCATCAGCACGTTGGCCAATAAGAATGAAGAGCTCCAAACCTTCCTGGAAACAGTCGACAACACACTGACGGGACTGCAGGAGGAGTCGTGTTCGGTGATGTCAGAGCTGGAGGCGGAGCTCGAGCAGCTAAGCTCTGCCTTGGAGGAGAGGGGGGCGTGGCTTCGTGACGTCATTAAAGAGGAGAAGCAGAGGAAAGAGGCAGAGCTTCAGaAGCAACTGTCGGAGGGAAAGTCGGCTGTTTTGTCGTGTGAAGAACTGCTCGAGTTCGCCAATCAGACGCTGACGATTACCAACGAAGAAGAGTTCCTGAAGgCTGCAAAACAAATCAAAGAAAGGATAACAATGGCTCCAGCGTTCCGGCTGACGACTCGTCCGGCGGTTTCGGAGAACATGTCTCAGTTTACCGTCGACTTCAGCGCCGAGAGGGCAGGGCTTCAGCGACTTCACTTCCTGTCTGTTCCCGGAGCTCCAGAGATCGACGTCTCCGGCTGCCTTGTCTGTGACAACACAGTCAGGGTTGCCTGGCAACCGGCCAGCGAGGCTGATGGCGAGGGCGAGGTCGGACGAATCGAACACTATGAACTCGAATACCGAAAAACAAACCGTGAAAGCTCGCTGAGAGCCGCAGGAGAGGCATGCTGGGAAAAAATCCCCGacatcagagacacacatgtCACCATCTCAGGTCTGAAGTTTGACTCCCGCTTCGTCATCGTTCGAGTTAGAGCGAGAAACAAAGCAGCTGCTGGCGAGTTCTCTGAGCCTGTCACCTTGGAAACCAGAGCGTATAACTTTGGGTTGGAGGCGGCGACAGCGCACGCGGAGCTGCAGGTTCGGGGCGACACGGTGACCTGGGAGCCTcagggggtcaaaggtcacgaCCCCCGcctgagaggaaaagagaacaaAAGCAGCAGCAGAAGCGCCACGCCGTCGCCCAATAAGACGGCAGGAAATCGAGCCGGACGCGACCGATTTGCCGGAGAGTCGTACACTGTGCTCGGCGACCAGGAGATGACTGGCGGCTGTCACTACTGGGAGCTCCGGCCCCTCGCTGACTGGAAGTCCTTCAGTGTGGGCGTGGCCAATCGGGCCACCCTGGGCCGCTTCGACCAATTAGGGAAGAGTTCTGGGTCCTGGTGTCTCCATGCCAGCCAATGGCTGCAGAGCTCACTCGCCGCCAAACACAACAACCGAGCCAAGGCCCTCGATTGGCCGCTGCCGCAACGAATTGGAATCTACTGCGACTATGACAACGGAGATCTATCGTTCGTCGATGTTGATCGACTTCATCTTCTTCACTCCTTCAAAACAAAGTTCAGCCAACCACTCGTCCCCGCCTTCACCGTTTGGTGTGGTGGTATCACCATAACGACGGGCCTCCAGGTGCCGAGCTTCATGGGTAATTTCCTCTCCACCAATCGGAGCCTCAGCAACCTGTCGCAGTAGATCAACCTAtaagctgtttttatttttattattttcaataactgtcattaatttattcattttatatttgtatttatgaattttaatttaataaataaataataggcTATTATATAGAAATACCTTGTGAATTATTAAATATGaattaaaaatgtgaaataaatgttatcatATAAAAAGACCTGTAATGAattaagaaaatatattttattaattgttCCTccctcttttattttgaaagtctgGACCTGACGCCACAGTTTTAGTTTAAGTGCTTTTACATTGAAGATGTACTAATATTGTCTGTTAGctcaggcttttattttgacagatttTGTCCAGAAAACAGCAAGGGTTGCAAACGCCGGCCGTATTAAAGTTGTGACCTCAGCGGCTTCCCGTAGAAACATTTCTTCTAAACGGCGGACCGGTGGTTTCTTTAAAGATAGTAACAGAAAAACTAAGCTATTCCCTCTGGCTTTAGTTTTAAAGGCTGTAACAAGATGTAATTTGTTGTGAAGTTTCTGTGTGAGATAATTTTATTATCAAATACTTCACTAGATATGTCGTATTGTGCATGCCTaatggcttttattttgaaggttagGATAGAACGACCTGTCATTTTGACGACATCACTGACTTTTATTGTGAGAATAAATATGAAATTGTACTTTTATAGATTTTTCTTGATGTTGAGAATCATTCAATTAAATGTTAATATCTGA

Function

symbol description
fsd1l Is expressed in otic vesicle. Orthologous to human FSD1L (fibronectin type III and SPRY domain containing 1 like).

NR:

description
PREDICTED: FSD1-like protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779480.1 False 1803 mRNA 0.52 12 34688963 34701659
XM_039779481.1 False 1800 mRNA 0.52 12 34688963 34701659
XM_039779482.1 True 2283 mRNA 0.48 13 34687629 34701659

Neighbor

gene id symbol gene type direction distance location
LOC120545296 NA coding downstream 230733 34445669 ~ 34456896 (-)
LOC120545303 NA coding downstream 447330 34230011 ~ 34240299 (-)
LOC120545302 NA coding downstream 503042 34182310 ~ 34184587 (-)
LOC120545310 NA coding downstream 514558 34171136 ~ 34173071 (-)
LOC120545096 NA coding downstream 616050 34070085 ~ 34071579 (-)
wu:fi75a02 NA coding upstream 191513 34893172 ~ 34910067 (-)
LOC120545270 NA coding upstream 1033700 35735359 ~ 35758865 (-)
LOC120545312 NA coding upstream 1148616 35850275 ~ 35853425 (-)
LOC120545279 NA coding upstream 1159677 35861336 ~ 35868849 (-)
LOC120545313 NA coding upstream 1204662 35906321 ~ 35920121 (-)
G180813 NA non-coding downstream 70492 34615603 ~ 34617137 (-)
G180826 NA non-coding downstream 76818 34610549 ~ 34610811 (-)
G180818 NA non-coding downstream 83164 34544834 ~ 34604465 (-)
G180823 NA non-coding downstream 87088 34578700 ~ 34600541 (-)
G180819 NA non-coding downstream 92852 34549553 ~ 34594777 (-)
G180834 NA non-coding upstream 95724 34797383 ~ 34797903 (-)
G180832 NA non-coding upstream 96711 34798370 ~ 34913158 (-)
G180847 NA non-coding upstream 99258 34800917 ~ 34801223 (-)
G180849 NA non-coding upstream 101768 34803427 ~ 34804074 (-)
LOC120545337 NA non-coding upstream 132488 34834147 ~ 34841404 (-)
ythdc1 ythdc1,LOC102794570 other downstream 8043 34611997 ~ 34679586 (-)
G180765 slc25a46 other downstream 300842 34289777 ~ 34386787 (-)
G180665 NA other downstream 887209 33799282 ~ 33800420 (-)
G180640 NA other downstream 979991 33662176 ~ 33707638 (-)
LOC120545090 NA other downstream 1008819 33304614 ~ 33678810 (-)
apc apc,LOC104937427,LOC106906682 other upstream 22217 34723876 ~ 34773434 (-)
LOC120545099 NA other upstream 123792 34825451 ~ 34844811 (-)
pisd pisd other upstream 154097 34855756 ~ 34885749 (-)
LOC120545298 NA other upstream 189086 34890745 ~ 34893069 (-)
G180873 NA other upstream 284562 34986221 ~ 35022077 (-)

Expression


Co-expression Network