LOC120545296


Basic Information

Item Value
gene id LOC120545296
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 34445669 ~ 34456896 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779507.1
TGAAGACTGAGAGAGGAGGTGAGGAGGTGAAGACTGAGAGAGGAGGTGAGGAGGTGAAGACTGAGAGAGGAGGTGAAGACTGAGAGATCAGAGCTGCTGGACCTTCATCAATTAACAGACAGACTTGCCTAAGAAACAAGATTCCTGTTGTGATGAACAGTACATGTTTTTGTGAAAACATGTGTCAAAGATGGAGATAACATGTGTTAAAGAGGAGCTTTTGAATACACTGGAAGATTTGTCAGATGAAGAATTCAAGAAGTTCAAGTGGTTCCTGCAGCAGCGTGAAATCCTGGTAGGATTCCAAGCCATCCCAAAGAACCAACTGGAAAACGCAGACAGGATAGACACAGTCGATAAGATCATACAGACCTTCAGCCATCAGTCTGTAGAAGTGGTGAAGCTGGTTTTAAAGAAGACTCGTAGGAATGATCTGGTGGAGAAATTATCAAACATCAGCACAGGAGCACAAGGCGTGTATGTGAGGAGTCAATCTGAGGCCTGTTCTCTGCCCAACACATTGTTGGAGGCCCCGGTCTCTCTACAGACCCCTACCCCCCCCCAGACCACCAGCCCCAGGGCAACCACACTGCCTGCCCCGTCTACACCTACCAGCCTGCTTCAGAGTCCTCCGGTGGACAAAGCTCAGAACACCTCATCCAAATATGACATCATCACCTGCAAAGTTCTGATCCAATCAGGATCTCCTGCTGTCTACCAGCTGATACCAAAGAAAGAGAAGATTGGATCTCTGACAAGAATGACTCTTGGtgaaaaaaatccaaacaagaaaaacaaaaccatcTTACTTGTTGGTGAAACAGGAGCAGGAAAATCTACTCTGGTCAACTACGCCATGGGAGTGGAGTGGGAGGATGATGTCTGGTTTCAGATcgtagaggaggagaagagaagactATCACAAAGTCAGACATCAGATGTGATCGTGTACCAGATCTGTGGTTTTGAAGATAAACCTCTTCCCTACTCTCTGACCATCATCGATACTCCTGGATACGGAGACACCAGAGGGATCGAatatgatgacatcatcactcaaAGATTATTAGACTTGTTCCAGTCAGACGATGGAGTTCATGAGATTGATGCAGTGGGTCTGGTGATGAAAGCGAGTGAGAATCGACTGAGTGACCGTCAGAGGTACATCTTTGATTCAGTGATGTCTCTGTTTGGAAAagaccaggggcctcatttataaaacctgttacgcaagaaaaagttgcgtgaagcagggtgaaattttt
>XM_039779508.1
GGAGGTGAAGACTGAGAGAGGAGGTGAGGAGGTGAAGACTGAGAGAGGAGGTGAAGACTGAGAGATCAGAGCTGCTGGACCTTCATCAATTAACAGACTTGCCTAAGAAACAAGATTCCTGTTGTGATGAACAGTACATGTTTTTGTGAAAACATGTGTCAAAGATGGAGATAACATGTGTTAAAGAGGAGCTTTTGAATACACTGGAAGATTTGTCAGATGAAGAATTCAAGAAGTTCAAGTGGTTCCTGCAGCAGCGTGAAATCCTGGTAGGATTCCAAGCCATCCCAAAGAACCAACTGGAAAACGCAGACAGGATAGACACAGTCGATAAGATCATACAGACCTTCAGCCATCAGTCTGTAGAAGTGGTGAAGCTGGTTTTAAAGAAGACTCGTAGGAATGATCTGGTGGAGAAATTATCAAACATCAGCACAGGAGCACAAGGCGTGTATGTGAGGAGTCAATCTGAGGCCTGTTCTCTGCCCAACACATTGTTGGAGGCCCCGGTCTCTCTACAGACCCCTACCCCCCCCCAGACCACCAGCCCCAGGGCAACCACACTGCCTGCCCCGTCTACACCTACCAGCCTGCTTCAGAGTCCTCCGGTGGACAAAGCTCAGAACACCTCATCCAAATATGACATCATCACCTGCAAAGTTCTGATCCAATCAGGATCTCCTGCTGTCTACCAGCTGATACCAAAGAAAGAGAAGATTGGATCTCTGACAAGAATGACTCTTGGtgaaaaaaatccaaacaagaaaaacaaaaccatcTTACTTGTTGGTGAAACAGGAGCAGGAAAATCTACTCTGGTCAACTACGCCATGGGAGTGGAGTGGGAGGATGATGTCTGGTTTCAGATcgtagaggaggagaagagaagactATCACAAAGTCAGACATCAGATGTGATCGTGTACCAGATCTGTGGTTTTGAAGATAAACCTCTTCCCTACTCTCTGACCATCATCGATACTCCTGGATACGGAGACACCAGAGGGATCGAatatgatgacatcatcactcaaAGATTATTAGACTTGTTCCAGTCAGACGATGGAGTTCATGAGATTGATGCAGTGGGTCTGGTGATGAAAGCGAGTGAGAATCGACTGAGTGACCGTCAGAGGTACATCTTTGATTCAGTGATGTCTCTGTTTGGAAAagaccaggggcctcatttataaaacctgttacgcaagaaaaagttgcgtgaagcagggtgaaattttt
>XM_039779509.1
actttttatttttctcaggGATCAAAGTGAATCTAATGAAGTTCATCATTGCTGAAACATCATCCAAGACTTCTTCAATCCTTCCTTCCACTTTAGACGCTTGTCTGTCATACTTCAACATCTCACACCTCCTCTTTATTTCTTTCAGGTCGTTCTTCAGCGCTTCAACGATCTCCATGAAGTCTTTCCTCAGTTTTTCTACTTTGCATACAATTTCTTTCTGTTTATATGTCTTTCTTTCTAATGCTGTACCAATAGCACTTGCTCCTACTGCTGTTATTGCTAAAGCTGCCCCTGTTGTGAATACAGCTCCAACAACCCCAAGTCCACACCATGCTGCTGCAAGAAaaactcctcctcttctctctatCTGTAtctttctgacttttttatcgATCTTCCGAAAACCTTTTACAATATCTCTCATGGTGTCTTTACAAGAGTCAAACTTTTTGATGAATGAATCTGCGTATGTTTTAAGTTTGTCCATTGCAGAGCATTGAAGAAGTGGACTTTAAATCAAACTTGAGAAAGGTTCTGTGGAGACAGGAAGCGATAGAGGTCATCAGAAtaaacccacacaggtgtttcctCACAGCTCCACTCAGACTTGCCTAAGAAACAAGATTCCTGTTGTGATGAACAGTACATGTTTTTGTGAAAACATGTGTCAAAGATGGAGATAACATGTGTTAAAGAGGAGCTTTTGAATACACTGGAAGATTTGTCAGATGAAGAATTCAAGAAGTTCAAGTGGTTCCTGCAGCAGCGTGAAATCCTGGTAGGATTCCAAGCCATCCCAAAGAACCAACTGGAAAACGCAGACAGGATAGACACAGTCGATAAGATCATACAGACCTTCAGCCATCAGTCTGTAGAAGTGGTGAAGCTGGTTTTAAAGAAGACTCGTAGGAATGATCTGGTGGAGAAATTATCAAACATCAGCACAGGAGCACAAGGCGTGTATGTGAGGAGTCAATCTGAGGCCTGTTCTCTGCCCAACACATTGTTGGAGGCCCCGGTCTCTCTACAGACCCCTACCCCCCCCCAGACCACCAGCCCCAGGGCAACCACACTGCCTGCCCCGTCTACACCTACCAGCCTGCTTCAGAGTCCTCCGGTGGACAAAGCTCAGAACACCTCATCCAAATATGACATCATCACCTGCAAAGTTCTGATCCAATCAGGATCTCCTGCTGTCTACCAGCTGATACCAAAGAAAGAGAAGATTGGATCTCTGACAAGAATGACTCTTGGtgaaaaaaatccaaacaagaaaaacaaaaccatcTTACTTGTTGGTGAAACAGGAGCAGGAAAATCTACTCTGGTCAACTACGCCATGGGAGTGGAGTGGGAGGATGATGTCTGGTTTCAGATcgtagaggaggagaagagaagactATCACAAAGTCAGACATCAGATGTGATCGTGTACCAGATCTGTGGTTTTGAAGATAAACCTCTTCCCTACTCTCTGACCATCATCGATACTCCTGGATACGGAGACACCAGAGGGATCGAatatgatgacatcatcactcaaAGATTATTAGACTTGTTCCAGTCAGACGATGGAGTTCATGAGATTGATGCAGTGGGTCTGGTGATGAAAGCGAGTGAGAATCGACTGAGTGACCGTCAGAGGTACATCTTTGATTCAGTGATGTCTCTGTTTGGAAAagaccaggggcctcatttataaaacctgttacgcaagaaaaagttgcgtgaagcagggtgaaattttt

Function

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779507.1 False 1265 mRNA 0.46 5 34445669 34453046
XM_039779508.1 False 1239 mRNA 0.46 5 34445669 34453024
XM_039779509.1 True 1751 mRNA 0.43 5 34445669 34456896

Neighbor

gene id symbol gene type direction distance location
LOC120545303 NA coding downstream 205370 34230011 ~ 34240299 (-)
LOC120545302 NA coding downstream 261082 34182310 ~ 34184587 (-)
LOC120545310 NA coding downstream 272598 34171136 ~ 34173071 (-)
LOC120545096 NA coding downstream 374090 34070085 ~ 34071579 (-)
LOC120545258 NA coding downstream 574790 33867993 ~ 33870879 (-)
fsd1l fsd1l coding upstream 230733 34687629 ~ 34701659 (-)
wu:fi75a02 NA coding upstream 436276 34893172 ~ 34910067 (-)
LOC120545270 NA coding upstream 1278463 35735359 ~ 35758865 (-)
LOC120545312 NA coding upstream 1393379 35850275 ~ 35853425 (-)
LOC120545279 NA coding upstream 1404440 35861336 ~ 35868849 (-)
G180799 NA non-coding downstream 30151 34415043 ~ 34415518 (-)
LOC120545351 NA non-coding downstream 42755 34402516 ~ 34402914 (-)
G180780 NA non-coding downstream 63111 34322134 ~ 34382558 (-)
G180676 NA non-coding downstream 89610 34355019 ~ 34356059 (-)
G180770 NA non-coding downstream 91742 34306653 ~ 34353927 (-)
LOC120545330 NA non-coding upstream 12177 34469073 ~ 34487071 (-)
LOC120545333 NA non-coding upstream 58043 34514939 ~ 34524799 (-)
LOC120545352 NA non-coding upstream 77120 34534016 ~ 34535357 (-)
G180818 NA non-coding upstream 87938 34544834 ~ 34604465 (-)
G180819 NA non-coding upstream 92657 34549553 ~ 34594777 (-)
G180765 slc25a46 other downstream 58882 34289777 ~ 34386787 (-)
G180665 NA other downstream 645249 33799282 ~ 33800420 (-)
G180640 NA other downstream 738031 33662176 ~ 33707638 (-)
LOC120545090 NA other downstream 766859 33304614 ~ 33678810 (-)
G180628 NA other downstream 1033050 33412103 ~ 33412619 (-)
ythdc1 ythdc1,LOC102794570 other upstream 155101 34611997 ~ 34679586 (-)
apc apc,LOC104937427,LOC106906682 other upstream 266980 34723876 ~ 34773434 (-)
LOC120545099 NA other upstream 368555 34825451 ~ 34844811 (-)
pisd pisd other upstream 398860 34855756 ~ 34885749 (-)
LOC120545298 NA other upstream 433849 34890745 ~ 34893069 (-)

Expression


Co-expression Network