Gene
RNA
| Item | Value |
|---|---|
| gene id | G183620 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 10956948 ~ 10957289 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | description |
|---|---|
| ko00830 | Retinol metabolism |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU248662 | True | 342 | lncRNA | 0.55 | 1 | 10956948 | 10957289 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120547319 | NA | coding | upstream | 181965 | 10770950 ~ 10774983 (+) |
| LOC120547318 | NA | coding | upstream | 188966 | 10761564 ~ 10767982 (+) |
| LOC120547237 | NA | coding | upstream | 200784 | 10751031 ~ 10756164 (+) |
| clmnb | NA | coding | upstream | 212404 | 10734648 ~ 10744544 (+) |
| LOC120547354 | NA | coding | upstream | 226166 | 10730505 ~ 10730782 (+) |
| flrt2 | LOC104961132,LOC103360508 | coding | downstream | 75138 | 11032427 ~ 11206367 (+) |
| LOC120547014 | LOC103358937 | coding | downstream | 542680 | 11499969 ~ 11509379 (+) |
| LOC120547310 | psma6,LOC103358936,LOC105930638,LOC102217550,LOC103457804,LOC107095481,LOC106935624 | coding | downstream | 579022 | 11536311 ~ 11543978 (+) |
| LOC120547096 | brms1l,LOC103358934,LOC100691440,LOC101472597,LOC102200527,LOC103380712 | coding | downstream | 620880 | 11578169 ~ 11590546 (+) |
| gtf2a1 | gtf2a1 | coding | downstream | 915687 | 11872976 ~ 11886364 (+) |
| G183615 | NA | non-coding | upstream | 34893 | 10921825 ~ 10922055 (+) |
| G183610 | NA | non-coding | upstream | 44841 | 10903691 ~ 10912107 (+) |
| G183597 | NA | non-coding | upstream | 58335 | 10820464 ~ 10898613 (+) |
| LOC120547320 | NA | non-coding | upstream | 196150 | 10756500 ~ 10760798 (+) |
| G183543 | glrx5 | non-coding | upstream | 228441 | 10650272 ~ 10728507 (+) |
| G183627 | NA | non-coding | downstream | 259664 | 11216953 ~ 11217156 (+) |
| LOC120547013 | NA | non-coding | downstream | 264337 | 11221626 ~ 11260823 (+) |
| G183648 | NA | non-coding | downstream | 410912 | 11368201 ~ 11368530 (+) |
| G183655 | NA | non-coding | downstream | 489882 | 11447171 ~ 11447408 (+) |
| G183687 | LOC104952422,LOC104931204 | non-coding | downstream | 588575 | 11545864 ~ 11548340 (+) |
| G183540 | sf3b6,pm14,SF3B6 | other | upstream | 290476 | 10622736 ~ 10666472 (+) |
| cdc42bpab | fzd3,LOC103374788 | other | upstream | 557136 | 10236949 ~ 10399812 (+) |
| LOC120546402 | NA | other | upstream | 844313 | 10111070 ~ 10112635 (+) |
| il17a/f3 | NA | other | upstream | 1354600 | 9595376 ~ 9602348 (+) |
| pnocb | LOC103362991 | other | upstream | 1452674 | 9469609 ~ 9504274 (+) |
| ches1 | foxn3 | other | downstream | 806854 | 11764143 ~ 11869192 (+) |
| bcl11bb | LOC103368061 | other | downstream | 1749929 | 12707218 ~ 12739384 (+) |
| LOC120546167 | NA | other | downstream | 1989710 | 12946999 ~ 13008411 (+) |
| G183994 | phip | other | downstream | 2188186 | 13145475 ~ 13247416 (+) |
| LOC120546706 | wdcp | other | downstream | 2510946 | 13468235 ~ 13474159 (+) |
