LOC120546493


Basic Information

Item Value
gene id LOC120546493
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 25955250 ~ 25968925 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU253938
TGAGGAAATAAGAATCCTTTATTTAGTTacacaaacattaaaacatacattatGTATCAtacactatttttatttatttttttaaactcattttAAGTTGAGAAATTATTACTTCTACAACAAGAGAGATTCTGCTTCCTTGAGAGCTTGTTCCATTTCGGCAGCCTCCAGGGAAAAGTTCTCCCTTTCCTGCTTCATATGTTGCCGTGCTTTAGCGAGTTCTGTCATTGTTACTTGGATTTCCTAGAGAGCACGTTGCTGTGATGCAGTGTCTCCAAACGCTTTTAATTCATTCAGCAGGTCTGTGGAGACACTCTGAAATGGAGACAATAAAATATGTGTTTAATAGTTGGCACTGCCTATGATAGCCAAAAGACTGTAACCCTTTGTGTAGGATTCAAGTATAGTctatatttaaattttaaaacaaGTAACATTTGTCACTTGTCTTTAATTGTGTGGTTTTATGGCATATAACAAGTGCATGTTTGTAGTTATTTGTGTGAGTTTGATAAagtatatgataaataaaacatgacTGTGCTTATAACATCAagtaaactgaaataaaatgtacgcACCATAA
>XM_039781434.1
TAAGACATGCTTCAAACCGTCAGGGTCCACTGTGTCCCTGGCATTCTGACAAGGAAACTAACAAGCGTCTGCAGAACAGATGCAGCAAAACCACGACGCTGCCCTCTTCTGGACGAACAAGGAATGTACGTCGTTTCTCcattaaaggCAGTGAATGGGTCACACATCCTGAATGTCATCAAAAGAACATGGGCTGGATTACTTGGGTTTCGTTTGTTGGCCTTCTGTGGATTTATCCACTTTGTCATTTAGCCAAGAAGACCTCCGATGACCCGAACACATGTCTGACGACCAAAAAGAccaattttgttgttgttgataacTTCAATGGCTTCATCACTGCAAAAAACTATTCGAATCTGACAACAGATTGCATAGTGTTTCTGCAGAAAAATGAAACTCGACAAAATAAGTATAACCAAACCCAGAAGTGGCCTCAAATAATGAAAGAACAATTTTCTTATTTTGTGCGCATCTCAAAATGGCATATCAATCAGAATCTGTATCTGTATGTCCTGGAAGGGAGGTGCAATGCAAGTTTATCAGGCTTCAAAGAGGTCAACAATCAGTCTCGAGTGTTAACGTGTGTCTTCAATTACACTGTCACAGACTCTTGCCAGATTAGATGTTTGGATACAGCGAATGTATGCCAACATTCTAAGTTTGATGAAAACAACTGCAGGGAAATAGTTCTCCCGGTCACAGACAGATACATCATCAAcataacagcaacaaaaaacaactgtgTCAACTGTAACAATCCCGTGAAACAGCCCAATGAGAAAATTCAGTTGAATGTAACAATTGACATTAAAGGAGACAAACTCGATGCTGCCCAAGCTACTAAAATCATGAACAAAGTGTCCGGCCTGGTCACATCCATGACGGGGTCTTCAGCTGCAGTGACTGTGGCAGAAGGAGTTACGGGTGTcgtagtgagagaaacaaagcccGCGGACGTACAGGAAGTCTCCATTGCTTACAGGTCTTCGAATGACAGCATGAGTATTATTGAAAACAAAGAGACTCTGGCTACATTTTCAAGATCTGTCACAGTGTCAAAAGAAGCGTTCGTTAAAGCTAGTTTGAATGTTACCATACCATTTGCAAGTGTTATCCGATTCCTCAATCTGGCTTCGGATATGAAGAATAGCACTGTTTTAGGTAATGAGGTTTTAGCCATTGAAATGGGAACCACTATCACCAATCTCACAGACAAAATGCAGATAAATTTTTGGAACATGACATacAAAGGAATTCCATCTTGTCAATCATGGAATGGTGAAGGGAGTCAACCAAACTGGACCGATGACGGATGTCTGACAATACATGATGGACAGAACATTTCCTGCGAGTGTTcgcatttgacattttttgctgTCTTAATGAGTCCTCTTAATGAAACCATATCTAGTTCTGACCTGAACAACCTCACCATCATCACCCAAGTTGGCTGTGGATTGTCCATGTTCTTCCTCTGCATAGTCCTCTTCATGCACTTCCTGCTGAGGAGGACCAAGGCCAGCAATGCCACAAGGATTCTCATCCACCTGGTTTCAGCCATGTTCCTGCTTAATTTCACTTTCCTAATCAACAACGTTGTGGCAAATCTGAATAGCTCTGTGGCTTGTAAGATCATGGCGGCTCTCATGCACTACTCCATGTTGGCCACTTTCACTTGGTTTGCTGTGCAGGCCTTCCACCTCTGCTTGCAGATATACACCGGGGGCCAGATTGTAATCAGTCGCTACATACTCAAAGTCTCCATTGTCAGTTGGGTACTACCAAGTGTAGTTGTGATTGTACTGCTCATTTTAGGAAAATATGGTGAACAAGTCATTCACACTAGTGACAGTGAAAAAACCGTGGCCATGTGCTGGATAACAGACAATTTGGTGCACTACGTTGTTAACATAGGCTACTATGTTTTGGTCTTCATCTTCACCTTCACTACCTTCATCATCATACTGTCCTGGCTGTTCTTTCTCAAGAGAACAAGAACCGGACAAACGAGCACACATGGCAAAAAGATTGTAATCATCCTGGGACTCTGTTGCATGCTGGGTATCACTTGGGGTTTTGCCTTCTTCGCCTACGGTGCCCTCCGGATCCCCTCCTACTACATTTTCACAGTCCTCAATTCTTTCCAAGGTTTCTTCCTGTTCATCTACTACTATAACACCAGCCACACAGGAGACCTAACCAGCGGTGCGAGCGGTCATAAAAACTCAAACAGCACCAACACTATTAAAACCAGCCTGAGCAGCTTTGAGAACCCCTACACTGATCCgccagaaaagaaataaaaatcccTGAAAGCCAAATGGGGACCAAAGAGCGATGAAAAAGGTCAGCTTGAAGTAACTTGAGACTACAAGCAAGTACTAAACATTAACTGGACAGGTATGGTTTTATGACTTTGTAAAATGCATCTTTCCTGACATATGATAGTCAGTGTATATAGGGAAATTGCTTCAATACTACATATTACTCCTTGTTTAGGTTATCTTAGGATCAGAATTTGGTTTTAACAATTTCATTCAGTAAGGCTCATAAAAGGGTGTGTCatgcagtttaattaattacttttgagACCTTTTTGTAATGCAAAAGTTCATTGTAATTATTTTTGacagattttttaaatgaaatgcttTTGAATGATTAAGTACTTGTTCAGGGCCCTCTGATCTTCCACATATATCCAAAATATCTATAGTTGTGGATAGATTACCTGTTCCACCCATTAGAACTTGCAGTGTTTAAAAGCACGTTTTAACTCTTCGAAATATGAAAAGATGGAACGTGAGGAAATAAGAATCCTTTATTTAGTTacacaaacattaaaacatacattatGTATCAtacactatttttatttatttttttaaactcattttAAGTTGAGAAATTATTACTTCTACAACAAGAGAGATTCTGCTTCCTTGAGAGCTTGTTCCATTTCGGCAGCCTCCAGGGAAAAGTTCTCCCTTTCCTGCTTCATATGTTGCCGTGCTTTAGCGAGTTCTGTCATTGTTACTTGGATTTCCTAGAAGTGTGTAAAATGaggaacatttatttaaaaaaacaaaaacaaaaaacacagtccAACCATACCTTAAATTTACTACAAGAAATCGCAAAGTTACATTGGCCAATATACGAAGGAGTGTGACTCACCTCTAGCCGAGCACGTTGCTGTGATGCAGTGTCTCCAAACGCTTTTAATTCATTCAGCAGGTCTGTGGAGACACTCTGAAATGGAGACAATAAAATATGTGTTTAATAGTTGGCACTGCCTATGATAGCCAAAAGACTGTAACCCTTTGTGTAGGATTCAAGTATAGTctatatttaaattttaaaacaaGTAACATTTGTCACTTGTCTTTAATTGTGTGGTTTTATGGCATATAACAAGTGCATGTTTGTAGTTATTTGTGTGAGTTTGATAAagtatatgataaataaaacatgacTGTGCTTATAACATCAagtaaactgaaataaaatgtacgcACCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253938 False 586 lncRNA 0.33 2 25968206 25968925
XM_039781434.1 True 3526 mRNA 0.40 19 25955250 25968925

Neighbor

gene id symbol gene type direction distance location
heca heca coding upstream 5840 25937301 ~ 25949410 (+)
clu clu,LOC102791322 coding upstream 53668 25888269 ~ 25901582 (+)
LOC120546553 NA coding upstream 118818 25830950 ~ 25836432 (+)
fmn1 fmn1 coding upstream 145328 25780782 ~ 25809922 (+)
aven NA coding upstream 304687 25609997 ~ 25650563 (+)
knl1 NA coding downstream 1473 25970398 ~ 25992873 (+)
jag2b jag2,LOC107377795 coding downstream 78547 26047472 ~ 26102398 (+)
esr2a LOC103368808 coding downstream 170484 26139409 ~ 26159436 (+)
hadhb hadhb coding downstream 329401 26298326 ~ 26310715 (+)
map3k5 map3k5 coding downstream 547918 26516843 ~ 26596774 (+)
G187378 NA non-coding upstream 49848 25902938 ~ 25905402 (+)
G187310 NA non-coding upstream 428378 25526447 ~ 25526872 (+)
G187299 LOC104926707,LOC100302438 non-coding upstream 514707 25405717 ~ 25440543 (+)
G187301 thbs1,LOC104926707 non-coding upstream 520944 25434001 ~ 25434306 (+)
G187260 NA non-coding upstream 615984 25338845 ~ 25339266 (+)
LOC120547280 NA non-coding downstream 278853 26247778 ~ 26249685 (+)
G187508 NA non-coding downstream 303443 26272368 ~ 26272595 (+)
G187535 NA non-coding downstream 346197 26315122 ~ 26315654 (+)
G187536 NA non-coding downstream 355591 26324516 ~ 26324734 (+)
LOC120546372 LOC103909865 non-coding downstream 910521 26879446 ~ 26885536 (+)
abracl abracl,LOC103376263 other upstream 19979 25929576 ~ 25935271 (+)
trnat-ugu_3 NA other upstream 735310 25219868 ~ 25219940 (+)
lama2 lama2,LOC104942190 other upstream 945793 24810079 ~ 25009457 (+)
G187094 bpnt1,LOC102799416 other upstream 1447437 24506913 ~ 24507813 (+)
extl3 extl3 other upstream 1767386 24155487 ~ 24187864 (+)
nudt14 nudt14,LOC107560374 other downstream 37929 26006854 ~ 26036232 (+)
atp5mj NA other downstream 288550 26257475 ~ 26260895 (+)
gareml garem2 other downstream 296264 26265189 ~ 26283008 (+)
tfap2d tfap2d other downstream 444766 26413691 ~ 26431397 (+)
tfap2b tfap2b other downstream 469561 26438486 ~ 26452365 (+)

Expression


Co-expression Network