LOC120546363


Basic Information

Item Value
gene id LOC120546363
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 12617707 ~ 12629854 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781282.1
GCTGTAAAACCTGTTGTCCCAGTTGGACACCAGTTGGGTGTGTATATTTCATCACAGCAGCGTGTTGATATTCACGTTCTTGTGTGACTGAGGCATTTGGTGACAACTTCACGAACGAGTCTTAAGACTTTGGACTAGCTTTCTGGCGGTCTAACGTTACAGTCTATTGAGCTTGAGTTACCAAAATGGCAGTTTTCCATGTACTTTTGAGCTGGACTGCTTTGTTTCTGCTCTTTCTGATTTTCATATCGTTTCTTGGTTATTGCTTATATGTTAAACACATTCATACGAAATATGACCACATACCCGGGCCACCGAGAGACAATTTTCTCTTCGGACATTCACCGACCTTTTTAAGGGTAATGAGAAAAGGCGACATCATTCACGACACGTTTCTGGAATGGGCCGAGACATATGGGCCTGTTTGCAGAATAAATGTTCTACATTACGTTGCGCTCATTGTGACCTGCCCAAAAGCGACCAAGGAGATCCTGATGTCCCCAAAGTATCCAAAAGATATATTCTACAGCAAAATCTTCAACCTGTTTGGTCAAAGGTTCCTAGGTAATGGCCTGGTAACAGCAAGAGATCATGAGAAGTGGTATAAACAGCGGCGGATCATGGACCCTGCGTTCAGCAGCTTGTATTTGAGAGGTCTAACCGACACCTTCAACGAGAGGGCAGAGAAACTGATGACTACACTTACAGATGTCGCTGATAACATGACAGAGGCCAGCATGCTCCACCTCATGAACTCTTTTACCCTTGATGTTATTGCTAAGGTTGCATTTGGAGTGGATTTAGACCTGCAGGAGGATAGATCAATTTTCCATAAAGCCATCGAGACATGTCTGAAAGGGATGTTCTACACAGCCAGAGACCTCTTATATGAGTACAAGCTGAAGAACCGACCATTCATTAAGAAAGTGAGGGAAGCTTGCCGCCTGCTGCGCACAACTGGAGCTAAGTGGATTAATGACCGAAAGACTGCCATGGAAAACGGCGATGACGTCCCCAAGGACATCCTCACACAGATCATCAAAACAGCCGGCAAAGAGGAAAGCATAACTAAAGAAGACGAAGAGTTGATGTTGGACAACTTTGTGACATTTTTCATTGCGGGGCAAGAAACAACTGCTAATCAACTGGCTTTTTGCATCATGGAACTTGGGAGACATCGTGACATTCTGGAGAAAGTGAAGAAAGAGGTGGATGATGTCGTTGGGATGAAACAGGAGATCAGTTATGATGATCTGGGACAACTGGTCTACCTCTCACAGGTGCTGAAAGAGACTCTGAGGATGTACTCGACAGTTCCAATCACATCTCGTGAAATACTGGAAGACATTGTCATCGATGGAATCCACATACCGGGAGGAGTCTCATGTTATTTCAGCTCCCATGCGACTGGGAGAATGGAGAAATTCTTCAAGGACCCGCTGACATTTGATCCAGACAGATTTCACCCAGATGCTCCCAAGTAAGTACCATACAAGTTTTCacaaaattacacattttatttttagtctTAACATTTTAGAACACTGATCGTTGTCCCAGATTAAA

Function

GO:

id name namespace
GO:0009072 aromatic amino acid family metabolic process biological_process
GO:0016746 transferase activity, transferring acyl groups molecular_function

KEGG:

id description
ko00120 Primary bile acid biosynthesis
ko04146 Peroxisome
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781282.1 True 1566 mRNA 0.44 13 12617707 12629854

Neighbor

gene id symbol gene type direction distance location
LOC120546361 NA coding upstream 18983 12589905 ~ 12598724 (+)
LOC120546360 NA coding upstream 28615 12583304 ~ 12589092 (+)
ism2b ism2,LOC104967641 coding upstream 43357 12560298 ~ 12574350 (+)
sptlc2b sptlc2,LOC103357434,LOC100704591 coding upstream 58503 12540595 ~ 12559204 (+)
snw1 snw1,LOC102781075 coding upstream 91568 12513600 ~ 12526139 (+)
LOC120546362 NA coding downstream 2159 12632013 ~ 12638525 (+)
ccdc85cb ccdc85c coding downstream 10802 12640656 ~ 12690800 (+)
agbl5 agbl5 coding downstream 259407 12889261 ~ 12907305 (+)
selenoi selenoi coding downstream 279113 12908967 ~ 12922556 (+)
tbx18 tbx18 coding downstream 426579 13056433 ~ 13066587 (+)
G183868 NA non-coding upstream 112584 12504685 ~ 12505123 (+)
G183866 NA non-coding upstream 137178 12480307 ~ 12480529 (+)
G183825 NA non-coding upstream 438857 12174579 ~ 12178850 (+)
G183762 NA non-coding upstream 730570 11886595 ~ 11887137 (+)
G183735 NA non-coding upstream 957816 11659672 ~ 11659891 (+)
G183891 NA non-coding downstream 9464 12639318 ~ 12640078 (+)
G183896 ccnk non-coding downstream 71314 12701168 ~ 12703242 (+)
G183933 NA non-coding downstream 116230 12746084 ~ 12747667 (+)
G184000 phip non-coding downstream 541068 13170922 ~ 13172244 (+)
G184071 NA non-coding downstream 785386 13415240 ~ 13415570 (+)
ches1 foxn3 other upstream 748515 11764143 ~ 11869192 (+)
G183540 sf3b6,pm14,SF3B6 other upstream 1951235 10622736 ~ 10666472 (+)
cdc42bpab fzd3,LOC103374788 other upstream 2217895 10236949 ~ 10399812 (+)
LOC120546402 NA other upstream 2505072 10111070 ~ 10112635 (+)
il17a/f3 NA other upstream 3015359 9595376 ~ 9602348 (+)
bcl11bb LOC103368061 other downstream 77364 12707218 ~ 12739384 (+)
LOC120546167 NA other downstream 317145 12946999 ~ 13008411 (+)
G183994 phip other downstream 515621 13145475 ~ 13247416 (+)
LOC120546706 wdcp other downstream 838381 13468235 ~ 13474159 (+)
LOC120546742 plcb1 other downstream 1394630 14024484 ~ 14140769 (+)

Expression


Co-expression Network