LOC120546626 (ppp1r13b)


Basic Information

Item Value
gene id LOC120546626
gene name ppp1r13b
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18873734 ~ 18898311 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781694.1
GACTATAGTGTTACGCGGCCTTGTTAGCCTCTCCAAGGAAAACCCCATTTGGGCAAAGGAGCACCACCGGCCACCAAAGAAGGAGATCAGGAGGAAACGGCGGGCGGCCAGAAGAGCCAAGACCATGGGCAGACGCAACTTAGTGAGGGCGGTTGGTATTTCTCGAGTGATGATATTAACGGTGTACCTCAGCGATGGGGAACAGGCTGTGACTGAGGTGCCCATCACCCCTGAGACGACGTGCCGCGATGTTGTCGAGTTCTGCAAGGAGCCCGGCGAGAGTGGCTGCCACCTGGCTGAGGTCTGGAGAGGCAACGAGCGAGCGATTCCCTTTGAGCACATGATGTATGAACATCTGCAGAAATGGGGGCCTCGGAAACAAGAAGTCAAGTTCTTCCTCCGGCATGAAGATTCGCCAACGGAGAGCAGTGATCAAGGGAGTCAGCAGTCTCAGGATCAGACGAGTCGCAGAAGTGGAAACACTGGAGAGAAGCACAATGAGAACGGGgtggGGAATCAGCGCGTGGAGCTCACGCTGTCAGAGCTGCAGGAGATGGCCacgcggcagcagcagcaaatcGAGGCTCAGCAGCAGATGCTCGTCGCAAAGGAGCAACGTTTGCGTTACCTGAAGCAGCAGGAGCGCCGTCAGCAGCAAACCGTTTCAGAGAGCGAGAAGCTGCAGAGGCTGAAAGACCGCGTGGAGAGCCAGGAGTCAAAGCTCAAGAAGATCCGGGCAATGAGAGGCCAGGTGGACTACAGCAAGGTCATCAATGGCAACCTGTCGGCAGAGATTGAGCAAGTCAGCAGCCTGTTCCAAGAGAAGCAAGCCGAGTTACAGTCTGCAGTGCTGAGGGTGGAGCAGCTCAGCCTGCAGCTGGAGGCGCGCAGGGGAAAGCTCAACGGCATACAGACCGCCCTGGGGGGGCAAGTAACCGGCGCTGCAGCCCTAGAGCTCCGGAAACTCTACCAGGAGCTTCAGATCCGGAACAAGTTGAACCAGGAGCAAAACAGCAAGCTGAAGCAACAAAAGGACCTTCTCAACAAACGCAACATGGAAGTGACGCTCATGGACAAGCGCATCAGCGAGCTGCGGGAACGCCTCTACAAGAAAAAAGCTGAGCTGAACAGAGCCAACGGGCCTCCCTCTCCCCAGCCTGCTCCTGGTACTCTGGGCCGTGTTGCTGCTGTCGGGCCGTACATCCAGGTCCCTGTACCGGGCCGGCAGGAAGGAGGCTACACCATACCACCAGATCCACTGAAGCCTCAGGCTCTGGGCGTTAATAACACCGCCAACCAAGGCCGCACCAAGTCAGACGGTGTGCGAAAGCCTCCCGGCCCTTGGAAAGTGTCTGATTTAGACATCGTTGTGGACCCAGTACCCCCGTCCCTTCCAGAATTACAACCGGGCACTGGAGCCTCCACTGGCTCTGACGGCACGTCCCCTAATGATACTGGTTGGCCTACTTTAGGCAAGACCACCACATCTCTAAAGCCTCCTGAGAGACGAGACTCAGGGACTGATACCCAGGGCAAGAGTCCTCCCTCAGGCTCCCCCGTCACTCCAAGTGCAGAAAAGGTGCTAGACCCCAAAATGACCGTGTCCTCCCCTGCCATATCCAAGCCACAGCCGCCTCCCTATGGCTCCCATCTCACCTCTGCAAACTCGGCCAGCTCCTTGGATCGACGCAAGGAtgtacctcctcctcctcgcccGCTCCCGAACCCGCCAGCACCTGCTTGGCCCCGCGTCCCCGCCTCCACAGGCTCATCCTCGCAGCAGATCCAGCAGCGAATCTCGGTGCCGCCAAGTCCCACCTTTCAGCCTAATGCACCGCTTTTCCCTCCTGGGCTGAGTGAGCGGCTGGATCCCCCGCCAGCTGTGGCAGTACGCCCCTTCATCCCAGACCGAGGATCACGGCCTCAGTCGCCCCGAAAGGGCCCACCTACCATGAACTCCAGCTCCATCTATCACATGTACCTCCAGCAGGCAGCGCCAAAGAGCCAGCCGCTCAAGCCTGCTCTCAAAGCAGTATATGGGAAGCCTGTTCTCCCCCCTAGCTCGACCCCCCCCTCGCCTCTGCCTTTCGCCCCGGCAGGAGGGGCCTTCCCGTTGCTCCAAGGCCACCTTGGTGGTGAGGACACTTTGGATGGAGAATTTGATGATCACGAGTACTTCCAGCACCCGGAGCCGTTAGCGCCTCCTCCCAGTGTGGAGAACATCCCACGGCCACTCAGCCCTACTAAGCTAACGCCCATGGTACACTCCCCGCTGCGCTACCAAAGTGACGCCGATCTTGAGGTGCTCCGCAAAAAACTGGCCAACGCTCCGAGACCGCTCAAGAAGCGCAGCTCCATCACAGAACCGGAGGGCCCCAGCGGACCCAACATCCAGAAACTGCTCTACCAGAGGTTCAACACTCTAGCAGGAGGCATAGAGGGAAATGGAGTCAGTGGATCAGGAAGTGGCAACGGTGCAGGTAATGGAACGCCATTTTATCAGCCAGCTAATCCTCCCGCGTATCTGGGAGGCGACTCTGTGGCCGACACCGACAATGGCAACCTCCCCTCTGAGACGCCGCTACCACCACCACCGGAGGGACAGGACCTGGGCTCTGAGGCTCCGCCTCCATCTACTGACGCTAATGACAATGAGCCACTGCCCTCGCCACCAGAGCTGGATCCTGCTGAAGCGGAGGAAGCCGAGGAGGACGACAACAATAACAATGTGGGAAGCTCTGAGGCATCGTTGCCCAGCCCCGTGCCAGAGGTGACCACTCCAGAAGAGAGCGGCAAAGTGGCCTCGCAGCCCCTGGACAAGCGCACAAACCTGAAGAAGCCAAACTCTGAGCGCACTGGCCACGGCTTCAGGGTGAAGTTCAACCCTCTGGCCCTGCTGCTGGATGCCTCATTGGAGGGAGAGTTTGACCTCGTCCAGAGGATCATCTATGAGgTGGAGAATCCTAGCACTGCCAATGACGAGGGCATCACACCCCTGCACAATGCAGTGTGCGCGGGACATCACCACATTGTCAAGTTCCTGCTGGATTTCGGTGTGAACGTCAATGCTGCAGACAGTGATGGCTGGACTCCGCTTCACTGCGCCGCGTCCTGCAACAGTGTTCATCTCTGCAAGTTGTTGGTCGAGTCAGGGGCCGCCATCTTTGCCAGCACCATTAGTGATGTGGAGACTGCTGCAGATAAATGCGAGGAAATGGAAGAGGGCTACATCCAGTGCTCCCAGTTTCTATATGGTGTTCAGGAGAAGTTGGGTGTAATGAACAAGGGGACCGTGTATGCTCTGTGGGATTACAAAACTCAGAACCAGGACGAGCTGGCGTTCAGCGAGGGGGACGCCATCACTATTCTGCGACGACAGGACGACAGTGAAACAGAGTGGTGGTGGGCGCGACTCGAGGACAACGAGGGCTACGTGCCCCGCAACCTGCTGGGGctctatccTAGGATCAAGCCTCGTCAGCGCTCCCTGGCATAGTGGCTCACTCCACTGACCTCTGGCTAACAGCTGGACTAGTGACAAAAACCAGGAGCAGAGAACAAAGGAGCCTGGTGCTCTGTCTTCTCCCCGTGGCCATAACCTCCCCCGGCCTTGTGCTTCTCACAAATCCTTTTTCTCTGACGCAGTGGGCACCGAACTCTGATACCCATATTTACATCTACACGCACATAGAAACACTCGATGAAACACAAGCACTCCAAATGCGAATAAATCTCTTAAACCACTCCATCCTGATTTGCACCCCCAACAACCAGCACCTTTCACCCTATTGCTCTGTCATTGTCCCAACTTGATCTTACTCCGATTCAGTGTCAGCTCTGTATCAGACATCAACTTGAAGAATAAAACACTAACCCATGTCTCAGTAGTTCTTGCAGTGGACTCTTCAGCCATGAGTTCTGTGGTGGCACTGGTTTACATGACACTGTATGTTGACTGGAAAATCATCTCTACTGGTGAGGCGTTGCTGATTTTTGTTAGTGGAATGTACTTTGAGTTATAGgacattaagttttttttttttaatgccaatTTGATCCCCTTGCGCGACAAATGTGCTCTGTGTTTGATTTTGCTGTAGTCTAACCACCAAAGATGAATATAGGTTTACCCATTTTAATTCTATTACTCCCCAAGACCTTGAAGAAAGGTTGAGGAGTGAGATCAAACAATTGATTTGCTGCTATCAGTATTGATTAATGATCTAAAGTCCTTCTAAATATGCTCAAGGAGCAGGAAATGGATTCAGGACTGGAAAATAGAAAATGTTGTAAACCCTCAGTATTAACTACACAGGCCAGTCAAAACAAATCCAGCGTATTAAAGAAAAGGATGGATCGCATTTCATGTACATCATTGCGagacttgttttttttcattcagtgtCACATGTTCAGAATCTAGGAGTATTGTGGattataaagttttttttctataatGGGAGATTTCAAGATGCATCAAGCTGTGTGAAAACACTGTTTGAATGAACAATCAAAATATTCACACAGAATTAGTATTTCGCTGAAATGAACGGCTCATGCTGCAGTTTCGAAAAGATCTTGTGatggaaatggaaaataaacCAGTATTTTTGCTTAACCAAAAACGTTGCCAGATGAGAAGAGCTGTAGAGTATGCATaaaggttacaaatgtaaaagaTCTAAAGGTATTGCAATTAAGAATTGGAAAAAGAAGTTGTTTTTATAGTTCTAAATTCCACAGTGGTGAGACGGGCAAGAATCAGCTCCACGGGGACAGACAGGTCCTAGTTCTTAATGGTGTTATTGGGTCATTTTTGCTATTTTCAAGTAATTTGCAGTATGTATAATGTTTTTAGGCATTTATAATAAGTTGGCCCTCACTACAGAGattcatagtttttatttttttctgacaacATGGCAAGGAGACCTGCAAGCAGTATCTCTACATGAAAAGAAGAACTTGCAAATATTTAATGAAATCCTTCACTGCACCTcaaaaaacactgaaatcaTCACTCAAAACACAATAACGAGTAACTTTGTTACCCCACTAGACAAAGTTAACACTCAATATTAATAACTTATTTTTGTTCTACTAGCTGCTAAGTAGATCTCTGGGCACTTAACGTTGCAGTTATTTTTCTGTGGCTGTGACAAACTCCACTTGAAACACTTAATCTCAGGACCAACATGGTGCTGCTGACACTCTTCCACCACTAAACTAGTGATcatatttctattttctatCTCAACAAACATCATGTTCAATTGAGCAgcgaaccaaaaaaaaaaagaaaacggatCAGCAATGGGCATAAATTATTGATCGATGAAGAGATGGTTATTGTGTCTGAAATGTaacatgaaaacaaatgttCAGATTCAGTCTTTAAATTCGCTTCAGACAATCCTGAATTTGCCCAGTTCTCTTCCTCTAGCTGCCCCCCTTTCAGGTATACACCATTCCAGTAACACTAATACATGCGTTATATGTCACATTATTATACATCTAGAGTCCAACAACTTGTTCTGAACTCTGAGTGACTGAGTGGTATGCCAGGTGTGCTAATGGCCCAGGCTTTATGATGGCTTAATCTGTACATAGTGTGAGGAGATGTGTTCTATGTCTGTTTGCTGTATGGACAAGTGGGCTTTCTGTATAAACGCTGTACTCACACATTGAATTCTGTAaatgtgaacaataaaacagAGGCTCTGGCATGACTAATGTATTTCAGTGTCGTATCGGCGAAATAATGCAgtttttcattttataaaatgtgtaaatatt

Function

symbol description
ppp1r13b Predicted to enable p53 binding activity. Involved in intrinsic apoptotic signaling pathway by p53 class mediator. Located in cytosol; nucleoplasm; and plasma membrane.

NR:

description
PREDICTED: apoptosis-stimulating of p53 protein 1 isoform X1

GO: NA

KEGG:

id description
K17554 PPP1R13B, ASPP1; apoptosis-stimulating of p53 protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781694.1 True 5796 mRNA 0.50 19 18873734 18898311

Neighbor

gene id symbol gene type direction distance location
LOC120546718 daam1 coding downstream 4125 18819081 ~ 18869609 (-)
LOC120546603 LOC104951063,LOC103372632 coding downstream 182778 18687807 ~ 18690956 (-)
LOC120546605 LOC103372633,LOC101488065,LOC104964430 coding downstream 193200 18668961 ~ 18680534 (-)
LOC120546602 NA coding downstream 206015 18658909 ~ 18667719 (-)
ptk2bb ptk2b coding downstream 559267 18293837 ~ 18314467 (-)
LOC120546204 NA coding upstream 10346 18908657 ~ 18913081 (-)
LOC120547084 LOC103364980,LOC104947346 coding upstream 16556 18914867 ~ 18932089 (-)
LOC120546312 NA coding upstream 59150 18957461 ~ 18962093 (-)
LOC120547184 NA coding upstream 116684 19014995 ~ 19046063 (-)
snx9b snx9,LOC100707634,LOC106957401 coding upstream 178967 19077278 ~ 19095705 (-)
G185479 NA non-coding downstream 140924 18726872 ~ 18732810 (-)
G185438 LOC104951064,LOC103372631,LOC100709203 non-coding downstream 175506 18695681 ~ 18698228 (-)
G185467 NA non-coding downstream 178938 18694554 ~ 18694796 (-)
G185454 NA non-coding downstream 237072 18636384 ~ 18636662 (-)
G185376 NA non-coding downstream 476564 18396888 ~ 18397170 (-)
G185556 NA non-coding upstream 15502 18913813 ~ 18914471 (-)
G185565 NA non-coding upstream 30014 18928325 ~ 18977441 (-)
G185619 rps6kc1 non-coding upstream 211198 19109509 ~ 19110183 (-)
LOC120546625 NA non-coding upstream 291925 19190236 ~ 19203995 (-)
G185644 NA non-coding upstream 299441 19197752 ~ 19197969 (-)
abcd4 abcd4 other downstream 83361 18778130 ~ 18790373 (-)
LOC120546357 LOC106525279 other downstream 226333 18640421 ~ 18647401 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other downstream 367536 18489815 ~ 18506198 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other downstream 960698 17911270 ~ 17913036 (-)
zgc:153284 NA other downstream 1106824 17764805 ~ 17766910 (-)
LOC120546223 LOC102213764,LOC101481591 other upstream 6226 18904537 ~ 18907254 (-)
LOC120546238 efr3b,LOC101073163 other upstream 435744 19334055 ~ 19354316 (-)
LOC120546212 fam150b,LOC104941953,LOC100704438 other upstream 750216 19648527 ~ 19652927 (-)
ccdc167 ccdc167 other upstream 948647 19846958 ~ 19849804 (-)
G186006 NA other upstream 1664126 20562437 ~ 20567479 (-)

Expression


Co-expression Network