ankef1a


Basic Information

Item Value
gene id ankef1a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 9733088 ~ 9754633 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782006.1
CAATAGCTGCCGTTCCACTGTCACTCACACAAACAAAGTCATCCCCAAGACTATGTAAATTGATACATGCACTGGCGGTCAAGGCCAAAGAACCGGTAATTCTACCTAGGCTCGTAGACTGTAAGAGACAGAGCGTAGGCTACTTAAGGAAGATACATGATGAAATGGAACGTAGATGCACATGGTGTCTATGCTGGTAATTctgtgtggaccccaggaacaGACTAGGCCTACAATCACTTCGTGGAAGCGAAAAGGGGTCTAAATCAGGTCTAAatcatacagtctatggtctaaATATAGGATGAAGAATAATGATTCAAGTGCTGTCAGAAAAATCGGATGATACACACACGTGGGACTTCCCTGACACCTggatgttgctgaaatgtgacGTTGGGGGAACAAAGTGAAGTTGGTGGTAACGCTGGTCCATCATGTTAATTGTattcagtttcagtttttttgtgtgtagtgtatttttttattttttttatttagttttacaaaTGATATGCTTTTACAGTAATGCACATATTTCCTTGCTGCAGTCGAATTTGGAGCCACAGAATTCGAATAACCGAGCTCATCACCGGCACTTGAAAGCAGCATCAGACACCACCAAAACACAAATGTCCAATTCCCTCCCGGCATTTTCACGCGTGCCGTTGCCATGGAGCTgagtttgtttcttttctccGGCTCACACAAAGAGTGAAAGGTAGTGCTTTAAAACAAAGTAAGGACTTTTTGGACAAACTTGGCAAAAGTGTGAGTGTCGTCGCCGTCCAGACGTGCTGCGTATGAGAACAACAAAGTGCAAAAGGACTTTTAAAATTTTTCACCAGCCACGCAGCTCATCTAAGCCCATAATGAGTGGCAGAGTGGCAAGGGGCCGCCTGCAGGTGCTCCAGATCTACCGCCTGCTGCAGTACGTCCATGAAGGGGACAAAGCGCAGATAGAGAAGATGGTCAAACTGGGGCTGGAAAACCTCATCAATCTCACTGAGCCACAAGATGGCACAGGGGTGCTTCACGTGGCAGTGTCAGCCAACAATCAGGACTTGGTCAGCTTCCTTCTCTCCCAGGGAGCACACCCCAACGTCCAGGACAAGAATGGCCGCACCCCGGTCATGTTAGCCGCCGAGCTGGGCAATGATGCCATAGTGGCACTGCTGGTCCAGAGCAATGCTAACCTCAGGCTTAAAGACAGCGAGGGCAAAGGTGTGCTATTCTACTGTATCTACCCCACCAAGCGCCACACCCGCTGCCTGCAGGTTGCACTCAAGTGCCAAGTAGACGTCAACGATGTGTCAGCGCAGGGGACACATGTCTTCCAGTTGATGTGTGAAAAAGCCCAGGAGTGCACCCCCATGTGTCTCATCATGCTGGGGGAAGGGGCAGACCCCAATGCAAcaaatcagAAAACAGGCGTCACAGCGTTAATGGAGGCAGCTAAGGCAGGCTCCCTGCAGCTTGTCAGAGCCATTCTAAAGAGAGGGGGAAACCCCAACGCCCTAGACCGAAAGCGCCTCACAGCTGTACACTATGCAGCCATGGGGGGCTTTTTTGAGTTGATTCAGGTGCTGTCTGCATACGCAGCAGACATGGGCGTGGCTAACCTAGAGGACTGCACAGCCCTCCACTACGCTGCTGCCCTGGGGAATGCTAACTGCTGCAAGTTCCTGGCACAGAGAGGTTGTAACCCCAAACTGAAGAACCAGGAAGGTTTGCTGCCACGTCAGATTGCCAAGGACGCCGGTCACAAAGCGGCTGTCAAGGAGCTTAAGAAGGCCGAGCGCCAGCAGGGAAAGGGCAACAAGCCCGGCGGTGGCGAGTGCCCTACGTCAGATCTCTGGGCCCTGACCCTCCACGACTGGTCGTACGAGCACGAGACTACACTACGACAAGCCTTGGGGAACCAATCAGAAATTGTCACCACCCAGATGTTTATTTCAGTGTTGGAAGAATTGAAAGCTCCGGTGGAACTAGACCAGCTCCATGCAGTCATCGCAGCCCATGACAAGGACAAAAAGGGATGCATCAACGTTAGTGATTTCCTCAAAGGTGTCAAGTACATCAAGAAACCATTTCTCCTCTCCGCGTATATgcctaaaaagaaaaagggagaaaagggTGGAAAAGGAGGTAAGAAGAAGGGTAAATTTGTCCTCACCTTGCCCATTTGCACCCTGCCGCCGGAGCGTATGGCCCGGCGGCCAGACGGAGGCCCGCCCAAATACATGATCGAGACATACTACAACTGCTCCGACATCCGCCGATTCGACCGCAGTCACCCTCAAGAGCATCCCATAATGAATGACTCAGGGTGGTACATAGAAAAGCCAGATAAGGTCTACGTCAGCATCAACTACTGTGTGAAAAGTGGAGACCTGGAGTCTCTGGAGCTGGCTCTCAACCACGGGGTTCCTGTGGACGTTCAGGACGAGTTCTACAAGACGCCGCTGATGGTGGCCTGCTCCAGCGGCAACTACGAGGTGGCTCAGTATCTCCTCAGTCGGGGGGcggatgtaaatgtgtgtgaccAGTTCTTCTGGACGCCCCTCCACCACGCGGCTCACGCTGGCCAAGTGGAGATTATTGAACTTCTGGTGGAGGCCGGGGCCAAAATAGATGCCCGGGCCCTCAGTGGAGGCACACCCCTCATGAGGGCCATCGAGAGCTCTCGACCCTCCTGTGTGGACTTCCTCATCAAGGCGGGTGCCAGTGTCAACGCCGAGAACAAAAAAGAACAAAACTGCTTCGACATCGCCACAGCTTTTGCAGACTCCAGGATAATTGACTTGGTCAAAGACAAGATGGATTCTCTGCCTAAACAAAAGGACGCAGCGAAGGGAAAGGGGGGCAAAGCTCCAAAGCCTAAACCGGCTAAGAGCGTTGCTGCAGAAGGTGCAGCGCTCACAGAGATCACATCGACTATAGCAGCAGGGAAGACCCCTCCTCAGAAGGATTCAAAGAGTGTCATCCTGCAGAACACCCGGATCACTACGGGGGAAACCAACGTGGTGGATATCACCGTTGTGCCAAAAACGgttTGGGGGAAGCAGCCCACCACCAGCCAGCTGATGTCAAAGATAGAGAGACGCAAAGAGCTCCTATCCCTCGAGGTGGACTTTGACGACTTCATGATGCCTTTCAGCCAGAACATCCAGAGGAAAACGCAGGAGCTGGCGAAAACCACAAACTAGACCGAAAGGACACAGTTACAGTAGGCAGCAAGAGACACTCACACATTTTGGAGTCATGTATTTTCGTTCCATTTGTCCTTGGAGGACGGAATTTCCGACGTCAAAGTCGGATACACGCCCCCTTGAACTC

Function

NR:

description
ankyrin repeat and EF-hand domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782006.1 True 3339 mRNA 0.51 11 9733088 9754633

Neighbor

gene id symbol gene type direction distance location
emilin1a emilin1,LOC103372345 coding upstream 434 9686657 ~ 9732654 (+)
mcm3 mcm3 coding upstream 150465 9567431 ~ 9582623 (+)
elp3 elp3 coding upstream 285847 9403109 ~ 9447241 (+)
tlr5a NA coding upstream 585444 9135335 ~ 9147644 (+)
LOC120547164 NA coding upstream 606556 9124096 ~ 9126532 (+)
snap25a snap25,snap25a,LOC107599071,LOC107698362 coding downstream 33434 9788067 ~ 9846851 (+)
LOC120546400 NA coding downstream 127501 9882134 ~ 9886722 (+)
LOC120547170 LOC103373899 coding downstream 138424 9893057 ~ 9904925 (+)
LOC120546401 NA coding downstream 176723 9931356 ~ 9933919 (+)
LOC120547052 NA coding downstream 240248 9994881 ~ 9996551 (+)
G183259 NA non-coding upstream 189873 9532524 ~ 9543215 (+)
G183255 NA non-coding upstream 205755 9521823 ~ 9527333 (+)
G183249 znf395 non-coding upstream 224607 9505448 ~ 9508481 (+)
G183191 NA non-coding upstream 404400 9327399 ~ 9328688 (+)
G183168 disp1 non-coding upstream 571035 9160340 ~ 9162053 (+)
G183309 NA non-coding downstream 3454 9758087 ~ 9758390 (+)
G183312 NA non-coding downstream 17587 9772220 ~ 9772463 (+)
G183320 NA non-coding downstream 92862 9847495 ~ 9848790 (+)
G183327 NA non-coding downstream 121448 9876081 ~ 9876412 (+)
G183350 NA non-coding downstream 179881 9934514 ~ 9935596 (+)
il17a/f3 NA other upstream 130740 9595376 ~ 9602348 (+)
pnocb LOC103362991 other upstream 228814 9469609 ~ 9504274 (+)
LOC120547211 hmbox1 other upstream 408225 9296060 ~ 9324863 (+)
LOC120547311 NA other upstream 600310 9129535 ~ 9132778 (+)
LOC120546611 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other upstream 695395 9020960 ~ 9037693 (+)
LOC120546402 NA other downstream 356437 10111070 ~ 10112635 (+)
cdc42bpab fzd3,LOC103374788 other downstream 482316 10236949 ~ 10399812 (+)
G183540 sf3b6,pm14,SF3B6 other downstream 868103 10622736 ~ 10666472 (+)
ches1 foxn3 other downstream 2009510 11764143 ~ 11869192 (+)
bcl11bb LOC103368061 other downstream 2952585 12707218 ~ 12739384 (+)

Expression


Co-expression Network