LOC120547170 (LOC103373899)


Basic Information

Item Value
gene id LOC120547170
gene name LOC103373899
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 9893057 ~ 9904925 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782646.1
GTGGACAGAACCGGAACTAACGCGTTACCAGGCGGGATCTTgaactaaaaacacaacaatggCGGCGGTAACCTCTAGTAGACCGTACCACATTGTAATTTTCGGTGCCACAGGGTTCACCGGACAGTTTGTTGTGGAGGAGGTCGCCCGTTGTGCTGCCGAGGGTCCCGGCGGTAGTTCCCTGAAATGGGCCGTGGCCGGGAGAAGCAGACAGCGTCTGGAAGAAGTGTTGAAACAAGCCGCGGGGAGGCTGTCTATGCCAGAGTTGAAGACAGATATTGAAATAATTGTTGCAGATGTGTCTATGGAGGAATCGCTGGCCATCATGTGCCAACAAGGCCTGGTGATTCTCAACTGTGTGGGACCTTACAGATTTTATGGCGAACCAGTGGTCAAAGCTTGCATCGAAAATGGAGCTCACTACATAGACATCTGCGGGGAGCCTCAGTTCCTAGAGCGTATGCAGCTAGAGTATCACACCAAGGCGTTGGACAGAGGAGTGTATGTGATTGGCAGCTGTGGCTTTGACTCCATACCGGCAGACCTGGGCATTCTCTATACACAGAGGCAGTTCAGAGGAACACTGACAGCTGTGGAGAGCTTCCTGAACATTAGCAGTGGGCCTGAGGGCTCGTCTGGCCACGATGCCACTTGGCAGGCTGCTGTGCACGGTTTCGCAGACAGCAAATCCCTCCGCCAGCTGAGGAAGAAGCTCGGCCACAAGCCGCTGCCTGTGGTGGGAGCCAAAATCAGAAAGAGgagttttgtgtttttcagtAAGGAGATCGAGCAGTATGCCATCCCATTTATGGGTTCTGACCCCTCAGTAGTCAAGAGAACCCAGCGTTTCCTTCATGAGGAGGAACAGCAGTCTCCAGTCCAGTACAGTGCCTACGTGGGGATTGGTGGCCTCCTCTCAGTAGTTAAGCTCTTCTGTGGCGGCCTGATCTTCTGGTTCATGGTCAAATTCAGCCTGGGCAGGAAACTCCTCACCATGTTTCCATCACTCTTCTCCTTTGGCTTGTTCACCAAGTCTGGTCCAACCATAAAGCAGATAGAAGACACCTGTTTCAGCATGACACTTTTCGGGGAGGGCTACTCAGAGGGTACAGATCCCACACAGGGCCGACCCAACGCAAAGATCTGCACCCAGGTCTTAGGAGCAGAGCCTGGTTATGTCGCTACAGTTTCTGCTATGGTACAAGCAGCCGTGACCTTGCTGAATGAAGTGCACTCTCTCCCCAGgagGGGAGGGGTATATACTCCAGGAGCTGCCTTCTATAAAACTAGTCTCATCGACCGCCTCCATAGCCACAGCATCAAGTTTTCAGTCAGAGACTACCAGTAATGCTTTATCACTGTGTAGGGCACGCCATCTTCCAGTTTAAGGATGTCAGTGCTGCTCAACTCGTatagatcttctgtgctgccggGGGAGGAAATTGTGTAGACAGATTCAGATACacttaatagttttttttattaaacttatTTAAGTTGCTCTGATCTGCTCTTTTGCTTCCATTCTCTGACCACTACCCCTCTCCACTGATGTCAGTGTAGACTGAACaaataatggacgtagcatcACTGACCTCACCCTTTGGTTTGGTGTATTTTGGCCGTCGCCATCTTGGTATTTGGAGCCCGCAGATTTTCAGCCTTCTGATGTGAGTCCTCCGGTGGAGTTTTACTGGCGGGTAAAGGCAGATCTGTAGGTACTGTAGATGTTAGTTAGCACGTTGAGTCAATGCGTaagaaataattaataataataaaaaagttctATCTTGACTATTCcaa

Function

NR:

description
PREDICTED: saccharopine dehydrogenase-like oxidoreductase

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782646.1 True 1803 mRNA 0.50 12 9893057 9904925

Neighbor

gene id symbol gene type direction distance location
LOC120546400 NA coding upstream 6335 9882134 ~ 9886722 (+)
snap25a snap25,snap25a,LOC107599071,LOC107698362 coding upstream 46206 9788067 ~ 9846851 (+)
ankef1a NA coding upstream 138424 9733088 ~ 9754633 (+)
emilin1a emilin1,LOC103372345 coding upstream 160403 9686657 ~ 9732654 (+)
mcm3 mcm3 coding upstream 310434 9567431 ~ 9582623 (+)
LOC120546401 NA coding downstream 26431 9931356 ~ 9933919 (+)
LOC120547052 NA coding downstream 89956 9994881 ~ 9996551 (+)
hnrnpub hnrnpu coding downstream 305211 10210136 ~ 10220742 (+)
fbxo16 NA coding downstream 477822 10382747 ~ 10394227 (+)
vsnl1a vsnl1,vsnl1b,LOC101070256,LOC102783710,LOC101471140,LOC106533326,LOC106921729 coding downstream 705955 10610880 ~ 10661241 (+)
G183327 NA non-coding upstream 16645 9876081 ~ 9876412 (+)
G183320 NA non-coding upstream 44267 9847495 ~ 9848790 (+)
G183312 NA non-coding upstream 120594 9772220 ~ 9772463 (+)
G183309 NA non-coding upstream 134667 9758087 ~ 9758390 (+)
G183259 NA non-coding upstream 349842 9532524 ~ 9543215 (+)
G183350 NA non-coding downstream 29589 9934514 ~ 9935596 (+)
G183363 NA non-coding downstream 71671 9976596 ~ 9976804 (+)
G183380 NA non-coding downstream 139053 10043978 ~ 10045105 (+)
G183411 NA non-coding downstream 205579 10110504 ~ 10110868 (+)
G183419 NA non-coding downstream 211580 10116505 ~ 10116775 (+)
il17a/f3 NA other upstream 290709 9595376 ~ 9602348 (+)
pnocb LOC103362991 other upstream 388783 9469609 ~ 9504274 (+)
LOC120547211 hmbox1 other upstream 568194 9296060 ~ 9324863 (+)
LOC120547311 NA other upstream 760279 9129535 ~ 9132778 (+)
LOC120546611 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other upstream 855364 9020960 ~ 9037693 (+)
LOC120546402 NA other downstream 206145 10111070 ~ 10112635 (+)
cdc42bpab fzd3,LOC103374788 other downstream 332024 10236949 ~ 10399812 (+)
G183540 sf3b6,pm14,SF3B6 other downstream 717811 10622736 ~ 10666472 (+)
ches1 foxn3 other downstream 1859218 11764143 ~ 11869192 (+)
bcl11bb LOC103368061 other downstream 2802293 12707218 ~ 12739384 (+)

Expression


Co-expression Network