LOC120547354


Basic Information

Item Value
gene id LOC120547354
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 10730505 ~ 10730782 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637057.1
tctttgcaGCCTTGTGAAGCTGCTCCTTGCAAGGACCATTGCTCGTGGGCACAACAAGGTTGCAGAAAGCAACTCAAAGAATGAAAAGGCGTGACTTCTGGAGGCTCGGGAGTTTCACGTGCGATGTTCCTTGGACAGAGTCCTGCTTTCCACGGCGGTGACGGTCTCGCTCTGTAGCCGTCACCTTTTCTTGAAGCAGGTAGAGCAAAAGCTGACAGCCAGATGTTGTTTGAAGCAGGGGAAGTTCTTCCTGTCAAGCACTGTCAACtgtcacaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637057.1 True 278 guide_RNA 0.51 1 10730505 10730782

Neighbor

gene id symbol gene type direction distance location
prkrip1 prkrip1 coding upstream 525 10728601 ~ 10729980 (+)
ints9 ints9 coding upstream 6943 10708295 ~ 10723562 (+)
tdrd6 NA coding upstream 37941 10670117 ~ 10692564 (+)
vsnl1a vsnl1,vsnl1b,LOC101070256,LOC102783710,LOC101471140,LOC106533326,LOC106921729 coding upstream 69264 10610880 ~ 10661241 (+)
fbxo16 NA coding upstream 336278 10382747 ~ 10394227 (+)
clmnb NA coding downstream 3866 10734648 ~ 10744544 (+)
LOC120547237 NA coding downstream 20249 10751031 ~ 10756164 (+)
LOC120547318 NA coding downstream 30782 10761564 ~ 10767982 (+)
LOC120547319 NA coding downstream 40168 10770950 ~ 10774983 (+)
flrt2 LOC104961132,LOC103360508 coding downstream 301645 11032427 ~ 11206367 (+)
G183543 glrx5 non-coding upstream 1998 10650272 ~ 10728507 (+)
LOC120547246 NA non-coding upstream 569482 10144098 ~ 10161023 (+)
G183421 NA non-coding upstream 613220 10116919 ~ 10117285 (+)
G183419 NA non-coding upstream 613730 10116505 ~ 10116775 (+)
G183411 NA non-coding upstream 619637 10110504 ~ 10110868 (+)
LOC120547320 NA non-coding downstream 25718 10756500 ~ 10760798 (+)
G183597 NA non-coding downstream 89682 10820464 ~ 10898613 (+)
G183610 NA non-coding downstream 172909 10903691 ~ 10912107 (+)
G183615 NA non-coding downstream 191043 10921825 ~ 10922055 (+)
G183620 NA non-coding downstream 226166 10956948 ~ 10957289 (+)
G183540 sf3b6,pm14,SF3B6 other upstream 64033 10622736 ~ 10666472 (+)
cdc42bpab fzd3,LOC103374788 other upstream 330693 10236949 ~ 10399812 (+)
LOC120546402 NA other upstream 617870 10111070 ~ 10112635 (+)
il17a/f3 NA other upstream 1128157 9595376 ~ 9602348 (+)
pnocb LOC103362991 other upstream 1226231 9469609 ~ 9504274 (+)
ches1 foxn3 other downstream 1033361 11764143 ~ 11869192 (+)
bcl11bb LOC103368061 other downstream 1976436 12707218 ~ 12739384 (+)
LOC120546167 NA other downstream 2216217 12946999 ~ 13008411 (+)
G183994 phip other downstream 2414693 13145475 ~ 13247416 (+)
LOC120546706 wdcp other downstream 2737453 13468235 ~ 13474159 (+)

Expression


Co-expression Network