LOC120548740


Basic Information

Item Value
gene id LOC120548740
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 1537830 ~ 1542581 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU270372
GTTTTACCCTACCTTTGGTCATCATTAAAGAAGTAAATGATTCACCTTCGTCCAGTGTGGTGACTAGAGGAGGAGTTAAACTGTCTGTCAATTTACACAAAAGATCTGCAGAGATGGCTTCTGATGCTACCTGACCTGATGTAACATGCCATGTCCTTGACCTCCATTGTGATGGCTGCTCTCTCGTGCTGTGTCAGTGTCCACCTGTGGACTGCACCTTTGTTCAACAAAAAACCTGAAAAGAACCACAGCAGCATGAACCGGACGCTGGAAAGATGCAGACCCCAGTTTGCCTCTTGTGTGGCCCTGACAAATGATAGCAGATCCTCTACCATTTCAATGTAGGAACTCCAAAACTGGAAAGGCACTTTGGAGGTCAGCAGCAACTTTTAAAGCAGCTTCACGGCAGTCTTGAGAAAGGGTTTCAAGACCCAGCAGCAATAACGTCAGCCTCAATCAGAATGTCTTGTAAGCCAGCATCTCCAAATCGCTTGCCAATACAGGACAGGAAAGCCATACATGTGTGAAACTCCCCCATTCTAATTTTCCCAATTCTGTAGGACTTGCATCAATCACTGGAAGGTAGCCGATGTTGGTTGGTGGTGGAATTGGATCTCCACGGATCACTGTGTTAAAACCAGTCCAGGAAGGAAGGACTTTGCCATGGACTGCAGTTTTTATCAGGAAGTAGGCACCATCTAATTTTTGTGCTGATTTCCTGGTAAGGATGTGGGTGTCTCGATTTAGTTCCAATTCTTTTCCAAAATGTTCTGGGCCTGTTCTCTTCCCTCTGATGTATGTCTCAAGGTTAGTAGGGGGCGGATCAAGAGACCTCTTTCTTGTTTTCTGTAAACACTGATGGTCAGGGGTAGGTTCATTACATGGaatcattttttgaattattatgCCATTTGTATTGTGTGTAGTCCCCTTACCAGATAACGTTTCCTCTCCAACATCATTATTGTCCCAAACTAGAGTTGCTTGCAACTGTACTTGCATGTTTTTGGGGATGTAAGTCTCACCTCGTAGTATTTGTAACTGTGCTAAAGCTGTGTCATGTtcaagtacagtacaggc
>XR_005637269.1
CAACCTTATCTGTGTTGAGACGTTGCTGAAAGAATTCAACAAATGCCTTCTCACCTATTTCTTTTGCATTCAGCAGATCTGCAGAGATGGCTTCTGATGCTACCTGACCTGATGTAACATGCCATGTCCTTGACCTCCATTGTGATGGCTGCTCTCTCGTGCTGTGTCAGTGTCCACCTGTGGACTGCACCTTTGTTCAACAAAAAACCTGAAAAGAACCACAGCAGCATGAACCGGACGCTGGAAAGATGCAGACCCCAGTTTGCCTCTTGTGTGGCCCTGACAAATGATAGCAGATCCTCTACCATTTCAATGTAGGAACTCCAAAACTGGAAAGGCACTTTGGAGGTCAGCAGCAACTTTTAAAGCAGCTTCACGGCAGTCTTGAGAAAGGGTTTCAAGACCCAGCAGCAATAACGTCAGCCTCAATCAGAATGTCTTGTAAGCCAGCATCTCCAAATCGCTTGCCAATACAGGACAGGAAAGCCATACATGTGTGAAACTCCCCCATTCTAATTGTAAGTCTTTCCTTGTATGTTTCACTCTTCCACCGTATCTCCTGAGCTTTGGCATAGATGGCTTGGTCAAAGACTAGAACTATCTCCTGAAGTTGGAGTCTGTCTGCAATTTCTGTTGATCTTTTAAGGATGGTTTTTGCAGTTCCCAATTCTGTAGGACTTGCATCAATCACTGGAAGGTAGCCGATGTTGGTTGGTGGTGGAATTGGATCTCCACGGATCACTGTGTTAAAACCAGTCCAGGAAGGAAGGACTTTGCCATGGACTGCAGTTTTTATCAGGAAGTAGGCACCATCTAATTTTTGTGCTGATTTCCTGGTAAGGATGTGGGTGTCTCGATTTAGTTCCAATTCTTTTCCAAAATGTTCTGGGCCTGTTCTCTTCCCTCTGATGTATGTCTCAAGGTTAGTAGGGGGCGGATCAAGAGACCTCTTTCTTGTTTTCTGTAAACACTGATGGTCAGGGGTAGGTTCATTACATGGaatcattttttgaattattatgCCATTTGTATTGTGTGTAGTCCCCTTACCAGATAACGTTTCCTCTCCAACATCATTATTGTCCCAAACTAGAGTTGCTTGCAACTGTACTTGCATGTTTTTGGGGATGTAAGTCTCACCTCGTAGTATTTGTAACTGTGCTAAAGCTGTGTCATGTtcaagtacagtacaggccaaaagtttggacacaccttctcattcaatgcgtttcctttttattttcatgactat
>XR_005637270.1
GTCTCCAGACAGCATTGTCTTGTATTTGTGAACCAATCTAAGTCCATCTGCTCACGTTCAAGCTATAAATGAGCATCGTCGTACACAAGCTCTAAGATGCCGACAGGAGCTGGGGGAAGTGTCATCCGGTCAAATCCCAAAAGTCTCCCTCAATCTTCCAACCATGGGCCATTGGTGGGGGAACATCAGGCTGATTCTTCAGGGACCTTCTGTATATGGCTGCCAGCAGATCTGCAGAGATGGCTTCTGATGCTACCTGACCTGATGTAACATGCCATGTCCTTGACCTCCATTGTGATGGCTGCTCTCTCGTGCTGTGTCAGTGTCCACCTGTGGACTGCACCTTTGTTCAACAAAAAACCTGAAAAGAACCACAGCAGCATGAACCGGACGCTGGAAAGATGCAGACCCCAGTTTGCCTCTTGTGTGGCCCTGACAAATGATAGCAGATCCTCTACCATTTCAATGTAGGAACTCCAAAACTGGAAAGGCACTTTGGAGGTCAGCAGCAACTTTTAAAGCAGCTTCACGGCAGTCTTGAGAAAGGGTTTCAAGACCCAGCAGCAATAACGTCAGCCTCAATCAGAATGTCTTGTAAGCCAGCATCTCCAAATCGCTTGCCAATACAGGACAGGAAAGCCATACATGTGTGAAACTCCCCCATTCTAATTGTAAGTCTTTCCTTGTATGTTTCACTCTTCCACCGTATCTCCTGAGCTTTGGCATAGATGGCTTGGTCAAAGACTAGAACTATCTCCTGAAGTTGGAGTCTGTCTGCAATTTCTGTTGATCTTTTAAGGATGGTTTTTGCAGTTCCCAATTCTGTAGGACTTGCATCAATCACTGGAAGGTAGCCGATGTTGGTTGGTGGTGGAATTGGATCTCCACGGATCACTGTGTTAAAACCAGTCCAGGAAGGAAGGACTTTGCCATGGACTGCAGTTTTTATCAGGAAGTAGGCACCATCTAATTTTTGTGCTGATTTCCTGGTAAGGATGTGGGTGTCTCGATTTAGTTCCAATTCTTTTCCAAAATGTTCTGGGCCTGTTCTCTTCCCTCTGATGTATGTCTCAAGGTTAGTAGGGGGCGGATCAAGAGACCTCTTTCTTGTTTTCTGTAAACACTGATGGTCAGGGGTAGGTTCATTACATGGaatcattttttgaattattatgCCATTTGTATTGTGTGTAGTCCCCTTACCAGATAACGTTTCCTCTCCAACATCATTATTGTCCCAAACTAGAGTTGCTTGCAACTGTACTTGCATGTTTTTGGGGATGTAAGTCTCACCTCGTAGTATTTGTAACTGTGCTAAAGCTGTGTCATGTtcaagtacagtacaggccaaaagtttggacacaccttctcattcaatgcgtttcctttttattttcatgactatttc
>XR_005637271.1
tttacacacacacgagcAGTACACAAGCTCTAAGATGCCGACAGGAGCTGGGGGAAGTGTCATCCGGTCAAATCCCAAAAGTCTCCCTCAATCTTCCAACCATGGGCCATTGGTGGGGGAACATCAGGCTGATTCTTCAGGGACCTTCTGTATATGGCTGCCAGCAGATCTGCAGAGATGGCTTCTGATGCTACCTGACCTGATGTAACATGCCATGTCCTTGACCTCCATTGTGATGGCTGCTCTCTCGTGCTGTGTCAGTGTCCACCTGTGGACTGCACCTTTGTTCAACAAAAAACCTGAAAAGAACCACAGCAGCATGAACCGGACGCTGGAAAGATGCAGACCCCAGTTTGCCTCTTGTGTGGCCCTGACAAATGATAGCAGATCCTCTACCATTTCAATGTAGGAACTCCAAAACTGGAAAGGCACTTTGGAGGTCAGCAGCAACTTTTAAAGCAGCTTCACGGCAGTCTTGAGAAAGGGTTTCAAGACCCAGCAGCAATAACGTCAGCCTCAATCAGAATGTCTTGTAAGCCAGCATCTCCAAATCGCTTGCCAATACAGGACAGGAAAGCCATACATGTGTGAAACTCCCCCATTCTAATTGTAAGTCTTTCCTTGTATGTTTCACTCTTCCACCGTATCTCCTGAGCTTTGGCATAGATGGCTTGGTCAAAGACTAGAACTATCTCCTGAAGTTGGAGTCTGTCTGCAATTTCTGTTGATCTTTTAAGGATGGTTTTTGCAGTTCCCAATTCTGTAGGACTTGCATCAATCACTGGAAGGTAGCCGATGTTGGTTGGTGGTGGAATTGGATCTCCACGGATCACTGTGTTAAAACCAGTCCAGGAAGGAAGGACTTTGCCATGGACTGCAGTTTTTATCAGGAAGTAGGCACCATCTAATTTTTGTGCTGATTTCCTGGTAAGGATGTGGGTGTCTCGATTTAGTTCCAATTCTTTTCCAAAATGTTCTGGGCCTGTTCTCTTCCCTCTGATGTATGTCTCAAGGTTAGTAGGGGGCGGATCAAGAGACCTCTTTCTTGTTTTCTGTAAACACTGATGGTCAGGGGTAGGTTCATTACATGGaatcattttttgaattattatgCCATTTGTATTGTGTGTAGTCCCCTTACCAGATAACGTTTCCTCTCCAACATCATTATTGTCCCAAACTAGAGTTGCTTGCAACTGTACTTGCATGTTTTTGGGGATGTAAGTCTCACCTCGTAGTATTTGTAACTGTGCTAAAGCTGTGTCATGTtcaagtacagtacaggccaaaagtttggacacaccttctcattcaatgcgtttcctttttattttcatgactatt
>XR_005637272.1
tttacacacacacgagcAGTACACAAGCTCTAAGATGCCGACAGGAGCTGGGGGAAGTGTCATCCGGTCAAATCCCAAAAGTCTCCCTCAATCTTCCAACCATGGGCCATTGGTGGGGGAACATCAGGCTGATTCTTCAGGGACCTTCTGTATATGGCTGCCAGATCTGCAGAGATGGCTTCTGATGCTACCTGACCTGATGTAACATGCCATGTCCTTGACCTCCATTGTGATGGCTGCTCTCTCGTGCTGTGTCAGTGTCCACCTGTGGACTGCACCTTTGTTCAACAAAAAACCTGAAAAGAACCACAGCAGCATGAACCGGACGCTGGAAAGATGCAGACCCCAGTTTGCCTCTTGTGTGGCCCTGACAAATGATAGCAGATCCTCTACCATTTCAATGTAGGAACTCCAAAACTGGAAAGGCACTTTGGAGGTCAGCAGCAACTTTTAAAGCAGCTTCACGGCAGTCTTGAGAAAGGGTTTCAAGACCCAGCAGCAATAACGTCAGCCTCAATCAGAATGTCTTGTAAGCCAGCATCTCCAAATCGCTTGCCAATACAGGACAGGAAAGCCATACATGTGTGAAACTCCCCCATTCTAATTGTAAGTCTTTCCTTGTATGTTTCACTCTTCCACCGTATCTCCTGAGCTTTGGCATAGATGGCTTGGTCAAAGACTAGAACTATCTCCTGAAGTTGGAGTCTGTCTGCAATTTCTGTTGATCTTTTAAGGATGGTTTTTGCAGTTCCCAATTCTGTAGGACTTGCATCAATCACTGGAAGGTAGCCGATGTTGGTTGGTGGTGGAATTGGATCTCCACGGATCACTGTGTTAAAACCAGTCCAGGAAGGAAGGACTTTGCCATGGACTGCAGTTTTTATCAGGAAGTAGGCACCATCTAATTTTTGTGCTGATTTCCTGGTAAGGATGTGGGTGTCTCGATTTAGTTCCAATTCTTTTCCAAAATGTTCTGGGCCTGTTCTCTTCCCTCTGATGTATGTCTCAAGGTTAGTAGGGGGCGGATCAAGAGACCTCTTTCTTGTTTTCTGTAAACACTGATGGTCAGGGGTAGGTTCATTACATGGaatcattttttgaattattatgCCATTTGTATTGTGTGTAGTCCCCTTACCAGATAACGTTTCCTCTCCAACATCATTATTGTCCCAAACTAGAGTTGCTTGCAACTGTACTTGCATGTTTTTGGGGATGTAAGTCTCACCTCGTAGTATTTGTAACTGTGCTAAAGCTGTGTCATGTtcaagtacagtacaggccaaaagtttggacacaccttctcattcaatgcgtttcctttttattttcatgactatt
>XR_005637273.1
CAGACAGCATTGTCTTGTATTTGTGAACCAATCTAAGTCCATCTGCTCACGTTCAAGCTATAAATGAGCATCGTCGATCTGCAGAGATGGCTTCTGATGCTACCTGACCTGATGTAACATGCCATGTCCTTGACCTCCATTGTGATGGCTGCTCTCTCGTGCTGTGTCAGTGTCCACCTGTGGACTGCACCTTTGTTCAACAAAAAACCTGAAAAGAACCACAGCAGCATGAACCGGACGCTGGAAAGATGCAGACCCCAGTTTGCCTCTTGTGTGGCCCTGACAAATGATAGCAGATCCTCTACCATTTCAATGTAGGAACTCCAAAACTGGAAAGGCACTTTGGAGGTCAGCAGCAACTTTTAAAGCAGCTTCACGGCAGTCTTGAGAAAGGGTTTCAAGACCCAGCAGCAATAACGTCAGCCTCAATCAGAATGTCTTGTAAGCCAGCATCTCCAAATCGCTTGCCAATACAGGACAGGAAAGCCATACATGTGTGAAACTCCCCCATTCTAATTGTAAGTCTTTCCTTGTATGTTTCACTCTTCCACCGTATCTCCTGAGCTTTGGCATAGATGGCTTGGTCAAAGACTAGAACTATCTCCTGAAGTTGGAGTCTGTCTGCAATTTCTGTTGATCTTTTAAGGATGGTTTTTGCAGTTCCCAATTCTGTAGGACTTGCATCAATCACTGGAAGGTAGCCGATGTTGGTTGGTGGTGGAATTGGATCTCCACGGATCACTGTGTTAAAACCAGTCCAGGAAGGAAGGACTTTGCCATGGACTGCAGTTTTTATCAGGAAGTAGGCACCATCTAATTTTTGTGCTGATTTCCTGGTAAGGATGTGGGTGTCTCGATTTAGTTCCAATTCTTTTCCAAAATGTTCTGGGCCTGTTCTCTTCCCTCTGATGTATGTCTCAAGGTTAGTAGGGGGCGGATCAAGAGACCTCTTTCTTGTTTTCTGTAAACACTGATGGTCAGGGGTAGGTTCATTACATGGaatcattttttgaattattatgCCATTTGTATTGTGTGTAGTCCCCTTACCAGATAACGTTTCCTCTCCAACATCATTATTGTCCCAAACTAGAGTTGCTTGCAACTGTACTTGCATGTTTTTGGGGATGTAAGTCTCACCTCGTAGTATTTGTAACTGTGCTAAAGCTGTGTCATGTtcaagtacagtacaggccaaaagtttggacacaccttctcattcaatgcgtttcctttttattttcatgactatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU270372 False 1080 lncRNA 0.44 7 1538188 1542521
XR_005637269.1 False 1252 lncRNA 0.44 5 1540784 1542578
XR_005637270.1 True 1408 lncRNA 0.45 7 1537830 1542581
XR_005637271.1 False 1344 lncRNA 0.45 6 1538360 1542579
XR_005637272.1 False 1341 lncRNA 0.45 6 1538360 1542579
XR_005637273.1 False 1253 lncRNA 0.44 6 1537835 1542579

Neighbor

gene id symbol gene type direction distance location
LOC120550152 NA coding upstream 115913 1421799 ~ 1421917 (+)
LOC120550191 NA coding upstream 116576 1421136 ~ 1421254 (+)
LOC120550209 NA coding upstream 118134 1419578 ~ 1419696 (+)
LOC120550221 NA coding upstream 119238 1418474 ~ 1418592 (+)
LOC120550188 NA coding upstream 119461 1418251 ~ 1418369 (+)
LOC120548868 LOC107373506,LOC104947936 coding downstream 247654 1790235 ~ 1792718 (+)
LOC120548869 NA coding downstream 251299 1793880 ~ 1800729 (+)
LOC120548870 NA coding downstream 275622 1818203 ~ 1819621 (+)
LOC120550130 NA coding downstream 331807 1874388 ~ 1874506 (+)
LOC120550533 NA coding downstream 332253 1874834 ~ 1874952 (+)
LOC120549593 NA non-coding upstream 238663 1298401 ~ 1299167 (+)
LOC120549594 NA non-coding upstream 239435 1297929 ~ 1298395 (+)
G199377 NA non-coding upstream 401303 1135925 ~ 1136527 (+)
G199375 NA non-coding upstream 404476 1133100 ~ 1133354 (+)
G199369 NA non-coding upstream 419444 1118087 ~ 1118386 (+)
LOC120548773 NA non-coding downstream 16741 1559322 ~ 1559689 (+)
G199429 NA non-coding downstream 121323 1663904 ~ 1664640 (+)
G199447 NA non-coding downstream 155463 1698044 ~ 1698261 (+)
LOC120550103 NA non-coding downstream 177400 1719981 ~ 1720099 (+)
LOC120550210 NA non-coding downstream 177625 1720206 ~ 1720324 (+)
LOC120549526 NA other upstream 436426 1099584 ~ 1101404 (+)
G199306 NA other upstream 545818 963109 ~ 992012 (+)
LOC120549207 NA other upstream 1486944 27895 ~ 50886 (+)
G199564 NA other downstream 616309 2158890 ~ 2159383 (+)
G199652 NA other downstream 1005404 2547985 ~ 2548539 (+)
G199689 NA other downstream 1149892 2692473 ~ 2693453 (+)
G199885 NA other downstream 1953499 3496080 ~ 3523889 (+)
LOC120549013 NA other downstream 3480077 5022658 ~ 5024934 (+)

Expression


Co-expression Network