G205284


Basic Information

Item Value
gene id G205284
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 22777821 ~ 22780275 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU278011
acacaatttacataaaaacaaactttatttTCAGTACTTGTTTCCCCCTCCACCccaacaataaaaaggcagttaAAATGTCTTGAGTAAAAAATAGTTAATCTGGACAATAAAAAAACTCCATATGACTAAAAGATCACAGCACATCctcttaaaaagtaaaaaagttcTCATTGCTAAAGCAATATTTCAGTAGAGCAGAGCATTCTCTCAGTAGTGATAATAAAAGCTCCCTCTTCTTTAATCCAGACAAATCCCTACAGGGATTAGTAATTGACAGAAGCAGTCAGTCACAGAGGCCACTACTCTTTCCAGGGACTTTCAGTAGACCTTTAAAAAGCCTGGTAAACTGGAGTTCAATGTGTCAACTGCACCTAGAGTTTTCTGACAACctaagaagagaaagagaaatgagATCTTGGACACACCAGTGCCTACATGCACACAATGGataacacacatgcaaaacTAACTTTATGCTAAGAGTATAGTATCATGCAACTCAAGCTGAAAGGTTTTTGTCCACCAATGGGCTGTTTTAACGCTTTGAGTGCAAAAACTAATTTTCATTAAAATTCTACAGAAATTAGGATAAAGAAATTAAGATGGAAATTGTTAAGTATTGAGTGAAATGAATGGACCATTATTGGCTTTATTTGAGCAAGAGTTGCATCACAAACATTTCTGATTGTTTTGTACGGCTTATTTTGCTCGGAAATAACTACAGATAGCATAATTTTGTACTTCAATGTTTTGGATATGTTTTGGATGACTTGCATTACTTGATGttttacacagaaaaaaaaaaaaaaatctaacaaatGAGTGTTGGGGTTAGTTTTACCTTCTTGTGGCGATCTTTAGGCTTTTAGAATCCTCTCTTCTgcgatttttttcttttataaaaaccAGCCAGCATGACTTTGCATCAAAGTCAAGTAAGATCCCTGCAAGCTTGATTTGAAATACTGTTGAAATTCCGTTATTTCAAGTGGCCGAAGATACATTGCTCTCGAGAGCTTGAATAGATAACACTAACTAAGGTTAATGACAATACATTACCTCAAGGAATGAtgagctttatttttttttccgaaGGTGAAATTACAAGTGTCATTTAGATAAGTTTTGAAAACAGACGAAGAGGATAAGTTCATTGTCAAAacagtatttgttttttgtcaggCTGACGTGTATACATACAGCTTATTCAGCGTTGTTGAGAAACCACTGAGGACCACTTTCACAAACTGAAGGCGTTCCTTTGGTACAACAAAGGCAAAATACCATGTTTAGATTGATTAAAAAGAAACTAGAAACTTTATTGAAACACGCACTGCAGAAAAACATTTTGGGATATATTTAGTATCCTATTTAGCCAAAGGTACACAAGCATTATGCATTTTTGAGACGGCACGGCTTAAAGCATACACAGTTGTCCTAAGGTTATGTACAAAATATTGAGTTGGCTGCAACCTTCCTCACACACTGTAAGGATTGTTAATCCTTCAAGCTTTACAAGAATTAGTCGATCATCAGCGTTGATTTTGCAAGTAATAGTCGGACAGAGATCATAATATACCAATTGTAAGTGTGGCAAAAATAGAAGCACTTTGTCAAATTGAGTTCAATAGTATTTTAGGAGATTCTATAACTTCACACAAGACTAGATTTGTTTTGTAGTATAaacaaatatttgactttttttttaatcaaaacgGCTCGTGGCTGTGTTTGAGTTTGTAACTAAATCTATTCTAGTTATAGTGAAGTTACATTGAGGTCTTATGAATAATTGTTGTCCAGTCATGAAGGACTTTTAAAATGCAGCCTACATGAGAAGAATTTATTGCCACATCACATTTAGTTCACGAACAATTAACTGAAATAACCATCATATATCACTAAAATGTTAATCTTGTTCCTTTGTTAGGTTTAAGTCACTGGGACCTGCCAACTACGCAACTGAAACAAACATTAATTGGAAACAGGTAAACAACGAAAAACCTTGTCTTAATGTTTCTCCTCTGGCACTATGATACAAACAAAACGTCTACcgagtttaaaaaacaaaaataaaccataaaaaaaagggaacaaaCGAGAGGGaaattacttttgaaaaaagtgagttACAATCGGAGACAGTTGCCATAGCAACTCTCTACCAGTAGCCGTTCAGTATCGATATGGATGCTCTCTATACGATCCCTTTGACTGCCTGGCCGCGGGGGCCTTGCCTCCGGCCCCGGAGTTGGACCATGAGTTTTCCCAATCATCTTGAGCTACAAAGACAAGAGAAACAAAACATCAGAGCGAGATAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278011 True 2326 lncRNA 0.36 3 22777821 22780275

Neighbor

gene id symbol gene type direction distance location
LOC120549279 fam179b coding upstream 13505 22751168 ~ 22764316 (+)
c20h14orf28 LOC104947194,LOC103357045 coding upstream 40047 22734786 ~ 22737774 (+)
LOC120549244 inafm2,LOC107721328,LOC108424446 coding upstream 104708 22671001 ~ 22673113 (+)
LOC120549002 pak6 coding upstream 149845 22608486 ~ 22627976 (+)
bub1bb bub1b,LOC102790633 coding upstream 173373 22600337 ~ 22604448 (+)
LOC120548821 rbbp4,LOC103390756,LOC100711479,LOC105015627 coding downstream 8360 22788635 ~ 22794588 (+)
si:dkey-157l19.2 NA coding downstream 18742 22799017 ~ 22843128 (+)
LOC120549820 mycl,LOC103357056 coding downstream 93316 22873591 ~ 22876714 (+)
LOC120548707 LOC103357057,LOC101482474,LOC102308648,LOC106519654 coding downstream 109716 22889991 ~ 22905293 (+)
LOC120549680 NA coding downstream 133436 22913711 ~ 22919265 (+)
G205279 NA non-coding upstream 5095 22772486 ~ 22772726 (+)
LOC120548706 NA non-coding upstream 58402 22717227 ~ 22719419 (+)
LOC120548704 NA non-coding upstream 63296 22713104 ~ 22714525 (+)
LOC120548703 NA non-coding upstream 71120 22705661 ~ 22706701 (+)
G205135 NA non-coding upstream 199927 22499496 ~ 22577894 (+)
LOC120548825 NA non-coding downstream 49957 22830232 ~ 22831590 (+)
G205293 NA non-coding downstream 51777 22832052 ~ 22844386 (+)
G205349 NA non-coding downstream 142040 22922315 ~ 22922639 (+)
G205345 NA non-coding downstream 144978 22925253 ~ 22928705 (+)
G205344 NA non-coding downstream 150655 22930930 ~ 22947866 (+)
srp14 srp14 other upstream 249072 22525155 ~ 22528749 (+)
gchfr gchfr other upstream 411921 22363664 ~ 22365900 (+)
LOC120549475 gpatch2l other upstream 1617535 21137212 ~ 21160286 (+)
acyp1 acyp1 other upstream 1781878 20994307 ~ 20995943 (+)
pgfb pgf,LOC104960941 other upstream 1990635 20772125 ~ 20787186 (+)
G205294 NA other downstream 53712 22833987 ~ 22846408 (+)
si:ch211-195o20.7 LOC102076813 other downstream 750633 23530908 ~ 23552582 (+)
ralgapa2 ralgapa2 other downstream 1548838 24329113 ~ 24447362 (+)
mgst3b LOC106536548,LOC108237254,LOC107096417,LOC100690646 other downstream 1973942 24754217 ~ 24759498 (+)
LOC120549173 LOC103365836,LOC101483368 other downstream 2316891 25097166 ~ 25149128 (+)

Expression


Co-expression Network