G205293


Basic Information

Item Value
gene id G205293
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 22832052 ~ 22844386 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU278029
AATACTAGtcattttctgctgcttttagttACTGATAATGGAGGAATTGCCTTTCCTCAGTTATTGCTCAAACAGTGGGATCTTTGTGTTGAACTATAATAGATTTCAAACTGGTATCATACactgtaataaatcatttataATGGAAAATAAAGATGTATGACAGATCAAATTGTCACATTGATTGAGGAGCATACTTTTTCTAATTGTCCTGTTAGTCTGATGTTCAGTTACTGTCCAGCCTCCTAAGTAGGATTTGTCaagaaccggttccaacttggaaAAATTTCCAAATCGATTCCAATGGGAGTTTTTCATTGGAATCATCTGGAAAATTGAGTTTGGAATCCAATCACTTCCAAAATTGAACACgtacaagttttggtttccgtagcagacACTGTCCCTCTAGGTgcttgtgttgcagccatggtgcacaaaatgaaatgtcttatctgtgaaataagcatgtcaCCAGTTTCAACTCTTCTCCCCCCCAAATAATCAAGAATCTGAATTGAAATCAGAATTGTTACAATCAAAAACATGCCGAACCCTTTCTTGAAACTCAATGCTGTACATTACTGATGTGATATTTCttatgtttgacatttttaatacattGCTTAATGGATATGTCAACTACTGGCATTCATAATGTTGAAGATCAATAAAAATCTTCAAATCTAGTTACaattaaaaaagtttaaaacaaaattGACCATTTTAAGTCATGACAAAAGACTCAACTGcatgttcatgtttttattgaaataagtCATAAGTTCTGTTACGGAGCGTTCCAGTCTTTGAGCTGAGTACCGAACCATTCATTAAACTAAAGCTACCTCCATGTGAAATACCAGGTCCTCTCACTATCGTCTCTGAAATCTGCCAGACCGTCAGTCTTCCACTCCACCTCAGAGGAGGTCATCCCATCATCCTCTTCACCTCCATCTGTAGGCTTCCAGTTTTCTTCCCTGCCTTCAGAAACCAGCGGCTCTACCTCTCTACTCCCTCTCCAGCGATTCAACACTTTGCCTTCCTTCTGATTCAAAGGGATCTCATCTTCTCCTCCAAATCCCTCCATCTCCCCCTCCACTACATACCCTGACCCATCCTCTTGGAACTGATTTGAATCCTTCACTTCACAGTCTTCCTCCCCTAAGATCCTCCTAAGGCCCAACTCCTCTAAATCGATTTGAATCCTTCACTTCACAGTCTTCCTCCCCTAAGATCCTCCTAAGGCCCAACTCCTCTAAATCCGGTTCTGTCGTCACTCCAGAGACAACCCCACTTTCCTCTTCAAGCTGCTCCTCATCCTCATCTTGCACTTCGTCATACTTTACTACGTCGGCGCTTTTCCACGGGGTCTCGCCTTTGTTCATGCTGACAGGAAGGAAAGCATCTTTTGCATACAGCTGATCAGAGACCAACAATGACGCACTGCTGGCAGAGCCTTGAAAAAAGTAGAGATGTAGCCATTTTTAATAGTCACAAGAAAATC

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
TU278029 True 1507 lncRNA 0.41 2 22832052 22844386

Neighbor

gene id symbol gene type direction distance location
LOC120548821 rbbp4,LOC103390756,LOC100711479,LOC105015627 coding upstream 37464 22788635 ~ 22794588 (+)
LOC120549279 fam179b coding upstream 67736 22751168 ~ 22764316 (+)
c20h14orf28 LOC104947194,LOC103357045 coding upstream 94278 22734786 ~ 22737774 (+)
LOC120549244 inafm2,LOC107721328,LOC108424446 coding upstream 158939 22671001 ~ 22673113 (+)
LOC120549002 pak6 coding upstream 204076 22608486 ~ 22627976 (+)
LOC120549820 mycl,LOC103357056 coding downstream 29205 22873591 ~ 22876714 (+)
LOC120548707 LOC103357057,LOC101482474,LOC102308648,LOC106519654 coding downstream 45605 22889991 ~ 22905293 (+)
LOC120549680 NA coding downstream 69325 22913711 ~ 22919265 (+)
LOC120549681 LOC103375071,LOC100696357,LOC104924638,LOC102794258 coding downstream 106805 22951191 ~ 22955699 (+)
LOC120549876 NA coding downstream 673466 23517852 ~ 23528486 (+)
LOC120548825 NA non-coding upstream 462 22830232 ~ 22831590 (+)
G205284 NA non-coding upstream 51777 22777821 ~ 22780275 (+)
G205279 NA non-coding upstream 59326 22772486 ~ 22772726 (+)
LOC120548706 NA non-coding upstream 112633 22717227 ~ 22719419 (+)
LOC120548704 NA non-coding upstream 117527 22713104 ~ 22714525 (+)
G205349 NA non-coding downstream 77929 22922315 ~ 22922639 (+)
G205345 NA non-coding downstream 80867 22925253 ~ 22928705 (+)
G205344 NA non-coding downstream 86544 22930930 ~ 22947866 (+)
G205359 NA non-coding downstream 134700 22979086 ~ 23003616 (+)
G205461 cln8,LOC102794823 non-coding downstream 496193 23340579 ~ 23341739 (+)
srp14 srp14 other upstream 303303 22525155 ~ 22528749 (+)
gchfr gchfr other upstream 466152 22363664 ~ 22365900 (+)
LOC120549475 gpatch2l other upstream 1671766 21137212 ~ 21160286 (+)
acyp1 acyp1 other upstream 1836109 20994307 ~ 20995943 (+)
pgfb pgf,LOC104960941 other upstream 2044866 20772125 ~ 20787186 (+)
si:ch211-195o20.7 LOC102076813 other downstream 686522 23530908 ~ 23552582 (+)
ralgapa2 ralgapa2 other downstream 1484727 24329113 ~ 24447362 (+)
mgst3b LOC106536548,LOC108237254,LOC107096417,LOC100690646 other downstream 1909831 24754217 ~ 24759498 (+)
LOC120549173 LOC103365836,LOC101483368 other downstream 2252780 25097166 ~ 25149128 (+)
LOC120549233 LOC103365834,LOC101066181,LOC100705758,LOC102786033,LOC101484046 other downstream 2305065 25149451 ~ 25180207 (+)

Expression


Co-expression Network