G205527


Basic Information

Item Value
gene id G205527
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 23781746 ~ 23819348 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU278351
taaaacttttatttataaaacaatTCCATAAGAATGGGGCATTCACATTCATTGGTATGCTAGCATTAAAGGCATGGTAAGGTTGAGCTGAGAAGGTAAAGAATGTAGCAGTGGTTTGCCTTTTTAATAGTACCTCAACATGTACTTTATACTATGGCAAACAAAGCTTTTACAAAAATATCAGCTGCATTTATTGCTAATTCCTGCATTGTTCTTACCTGTACAGTGTCAAATATGTGTAAGAGAATACATTAATGTTTCCAAGATAGAAAagattatatatacacacacacacacaggacacaaacaaaaagaaacattgGCTTTTAAACATCATTGTAGTTTAAATCATTCAATTAGGCAGCCAGATCTCAAAAACACTTGTACATTTCAATGCATAAACTGAAAATTACAATCTTCAGAAAAagacagtaggctacatttaaaaTGAAGTGGAAAAAATGTCAAGCggtattgcattttttaaaatttttttttatatactaatGGACCAGATCTTTAGCCAACAGTTCAAGCCTTCACCCAAAAAAGTTAGTTTGCTAAGATATACATAATGAAAtctatcaataaataaaaacagcattaataacattaaaaccTGTACAGATACAATGGGCAAACATTGTACTTTAGTGCACAAAAAGGCTTAGTTGCGAAAGTCAGTGTCCTCCCTGTTTGTTTAAGCCAGCCAGCATCTCTTTTCAGGAGGACTGACACGAACACCACAGCTCTTTGGATGGATCTTTTTAGATCGTAATAGCCTTTAAATCAGTGCCACCTTTCACTTTTAACGAAAAGGTAATTTGTAATAACCAATGACCTACAGTGTTTGGTTCTGTGACACcaaatgcaaatggaaattttACCAACCCTGAACCCATGACCTCTGTGTGAAGGCCTGCTGCCCGGCAAACTGTGCCTCCAAAAACTTGTTCCCATGGCTCTATATGCACTACGGACTTTCTTCCTCTTAACTTTTGGTACGGACGAGGACATTCTTTCCATTTCTTCAAAGGTCAACCAAATAAAAACTGCCAATCAGCATGAGCTGCAGGGGAAACCAGGATGGAATACGTCACTCAGACAGTTTGTTGGGAAAAGCCCAGAGAGCTGAGGAAATTGCAGGAACATCAGTGCTTGGCAGATTCATTACAGGTATCATCATTGGCCAAGGCTTCTATCAGAACTGATATTTTACACCTAACTTTTAGCTGGCAGGTTTGTGGCTTACAAAAGCGACTTCAGAGTTTAGGCACAGCTTCACAGCCACACTAGTATAGCCTGCAGTGAGCCACAGGGGCTTTGGTCAGTCTCTCACCTTTATGACCATTGCCTTGTGGCCCTGGTACAGTATAGATCTGCTCTGCCCATCCAGTCCCCTATGATGAGGTGGCATTTCCAGATTCAGTGGCACAGCTCTCAGCGGGGTCATAGAAACAGTCTTCATTCACTACAGAAGCCAGACTTTGGACGCTGAACTCTCTCTCCAACAACGTGTTGAAGTCCATGACCCCTGACGACGATGCTGCATCCGTCTGGCTGTCCATTGACGTGCTGTGTGCCTTCATGTTTAACAGTGCACCTTGGCTCCTCCTCAAACTGTTGGTATTCCTCTTAACAGCATTAAAGTGTCCTCGCCTCAGTTTGGGTTGGGTCTCTGGAGTGTCCCCCACTCCCTCAGGTTGAACACAGGGAGCTGGGGCAGCATCCTCTGAGAGTTTAAGTTGGAGGAACTGAGCCTCAATGGCGCTAGTTGGGGAACTGCTGTCTCCACTGCCCCTCCTTGTTCCCCCCTCGCTAaagccatcatcatcatcatcacttaAAATATCAGACTCTTTCACAGCAGAGGTGGAGCGGGTTTGCGAGCTGGATCCAGGTGGCTGAGGCCAGTTCTGCTGGACAGGGAGGATGTGCATCTCAGAGGAGGTGCAAGGTGGAGGAGCCCCAGATAAACTGTAGGTTCCACTGCTCAGGCTCCCCTCATCTGAGTCTGGCCCCAGCTTGGGATTCGCAGCCTGGGTTGCGAGATCTCCAAGTGGCTGCTTACACAACCAGGATGCCCTGGTGGAACCTAGTAACACATGTGGAGATGGAAGTTAGAAATGCCACTCTTATCTGAGCAAAACACTTGCACCCTTAGCCCCTCTAGCATTTTATGACCTAAAAAGTGAGACACGATTATCTCTAAAGTACATGCATACTTAGCATTACACAGTAGatggttttaaaggctaaaaTAGCAGTCAG
>TU278352
taaaacttttatttataaaacaatTCCATAAGAATGGGGCATTCACATTCATTGGTATGCTAGCATTAAAGGCATGGTAAGGTTGAGCTGAGAAGGTAAAGAATGTAGCAGTGGTTTGCCTTTTTAATAGTACCTCAACATGTACTTTATACTATGGCAAACAAAGCTTTTACAAAAATATCAGCTGCATTTATTGCTAATTCCTGCATTGTTCTTACCTGTACAGTGTCAAATATGTGTAAGAGAATACATTAATGTTTCCAAGATAGAAAagattatatatacacacacacacacaggacacaaacaaaaagaaacattgGCTTTTAAACATCATTGTAGTTTAAATCATTCAATTAGGCAGCCAGATCTCAAAAACACTTGTACATTTCAATGCATAAACTGAAAATTACAATCTTCAGAAAAagacagtaggctacatttaaaaTGAAGTGGAAAAAATGTCAAGCggtattgcattttttaaaatttttttttatatactaatGGACCAGATCTTTAGCCAACAGTTCAAGCCTTCACCCAAAAAAGTTAGTTTGCTAAGATATACATAATGAAAtctatcaataaataaaaacagcattaataacattaaaaccTGTACAGATACAATGGGCAAACATTGTACTTTAGTGCACAAAAAGGCTTAGTTGCGAAAGTCAGTGTCCTCCCTGTTTGTTTAAGCCAGCCAGCATCTCTTTTCAGGAGGACTGACACGAACACCACAGCTCTTTGGATGGATCTTTTTAGATCGTAATAGCCTTTAAATCAGTGCCACCTTTCACTTTTAACGAAAAGGTAATTTGTAATAACCAATGACCTACAGTGTTTGGTTCTGTGACACcaaatgcaaatggaaattttACCAACCCTGAACCCATGACCTCTGTGTGAAGGCCTGCTGCCCGGCAAACTGTGCCTCCAAAAACTTGTTCCCATGGCTCTATATGCACTACGGACTTTCTTCCTCTTAACTTTTGGTACGGACGAGGACATTCTTTCCATTTCTTCAAAGGTCAACCAAATAAAAACTGCCAATCAGCATGAGCTGCAGGGGAAACCAGGATGGAATACGTCACTCAGACAGTTTGTTGGGAAAAGCCCAGAGAGCTGAGGAAATTGCAGGAACATCAGTGCTTGGCAGATTCATTACAGGTATCATCATTGGCCAAGGCTTCTATCAGAACTGATATTTTACACCTAACTTTTAGCTGGCAGGTTTGTGGCTTACAAAAGCGACTTCAGAGTTTAGGCACAGCTTCACAGCCACACTAGTATAGCCTGCAGTGAGCCACAGGGGCTTTGGTCAGTCTCTCACCTTTATGACCATTGCCTTGTGGCCCTGGTACAGTATAGATCTGCTCTGCCCATCCAGTCCCCTATGATGAGGTGGCATTTCCAGATTCAGTGGCACAGCTCTCAGCGGGGTCATAGAAACAGTCTTCATTCACTACAGAAGCCAGACTTTGGACGCTGAACTCTCTCTCCAACAACGTGTTGAAGTCCATGACCCCTGACGACGATGCTGCATCCGTCTGGCTGTCCATTGACGTGCTGTGTGCCTTCATGTTTAACAGTGCACCTTGGCTCCTCCTCAAACTGTTGGTATTCCTCTTAACAGCATTAAAGTGTCCTCGCCTCAGTTTGGGTTGGGTCTCTGGAGTGTCCCCCACTCCCTCAGGTTGAACACAGGGAGCTGGGGCAGCATCCTCTGAGAGTTTAAGTTGGAGGAACTGAGCCTCAATGGCGCTAGTTGGGGAACTGCTGTCTCCACTGCCCCTCCTTGTTCCCCCCTCGCTAaagccatcatcatcatcatcacttaAAATATCAGACTCTTTCACAGCAGAGGTGGAGCGGGTTTGCGAGCTGGATCCAGGTGGCTGAGGCCAGTTCTGCTGGACAGGGAGGATGTGCATCTCAGAGGAGGTGCAAGGTGGAGGAGCCCCAGATAAACTGTAGGTTCCACTGCTCAGGCTCCCCTCATCTGAGTCTGGCCCCAGCTTGGGATTCGCAGCCTGGGTTGCGAGATCTCCAAGTGGCTGCTTACACAACCAGGATGCCCTGGTGGAACCTATCCTGGCGGAGGAGGGCAGGGTGCTGCGCAGGGGGACCAGGCGCTCCTTACAGCTCCTCTCCAACGTGCCCTCGCTCCTCATGTTCCTCTTCACGTTCTCCCTGAGGATGGAGCGGATCACCTTGATGATGTGGACCTTGTTCTCTGGCACACTGCTACACAGCTGGAAGACTGTCTCTGGTCTCCCTTCCACTTCAGACCTGGAGTGAATCAGCTCCCAGATGCAGCTGCTTTCTGTGCCTGTTCCTGGGAGAGTGGGGGAATAAAGGAGAGGGCTTTTAATCACACAGTCCAAATATGGTTTATGGCTTCAGAAGTAGATAAGGAGGGAGGGAACAGAAATGCCAGGTGTGTGGGCAAGGAGAATGAGCTTTGGGGGTTTGTGTGGGGAAATACGAAGGGGGAGAAAGAACAAAAAGATTTAGTGGATGTACTTTGTGAGTGATTTAGTGGGGATACTGTGGCCGTTTGTCAGCCTCTTACTGTACCTGCAGTATTTCCCAACCTGACCTGCAGCGCAGAGAGCGGAATGAGCCAACGGAACTTAAAGGGGTCCGAATCTCCGTGAGAAAGTGCTGAACGAGAGTTGGTC
>TU278353
taaaacttttatttataaaacaatTCCATAAGAATGGGGCATTCACATTCATTGGTATGCTAGCATTAAAGGCATGGTAAGGTTGAGCTGAGAAGGTAAAGAATGTAGCAGTGGTTTGCCTTTTTAATAGTACCTCAACATGTACTTTATACTATGGCAAACAAAGCTTTTACAAAAATATCAGCTGCATTTATTGCTAATTCCTGCATTGTTCTTACCTGTACAGTGTCAAATATGTGTAAGAGAATACATTAATGTTTCCAAGATAGAAAagattatatatacacacacacacacaggacacaaacaaaaagaaacattgGCTTTTAAACATCATTGTAGTTTAAATCATTCAATTAGGCAGCCAGATCTCAAAAACACTTGTACATTTCAATGCATAAACTGAAAATTACAATCTTCAGAAAAagacagtaggctacatttaaaaTGAAGTGGAAAAAATGTCAAGCggtattgcattttttaaaatttttttttatatactaatGGACCAGATCTTTAGCCAACAGTTCAAGCCTTCACCCAAAAAAGTTAGTTTGCTAAGATATACATAATGAAAtctatcaataaataaaaacagcattaataacattaaaaccTGTACAGATACAATGGGCAAACATTGTACTTTAGTGCACAAAAAGGCTTAGTTGCGAAAGTCAGTGTCCTCCCTGTTTGTTTAAGCCAGCCAGCATCTCTTTTCAGGAGGACTGACACGAACACCACAGCTCTTTGGATGGATCTTTTTAGATCGTAATAGCCTTTAAATCAGTGCCACCTTTCACTTTTAACGAAAAGGTAATTTGTAATAACCAATGACCTACAGTGTTTGGTTCTGTGACACcaaatgcaaatggaaattttACCAACCCTGAACCCATGACCTCTGTGTGAAGGCCTGCTGCCCGGCAAACTGTGCCTCCAAAAACTTGTTCCCATGGCTCTATATGCACTACGGACTTTCTTCCTCTTAACTTTTGGTACGGACGAGGACATTCTTTCCATTTCTTCAAAGGTCAACCAAATAAAAACTGCCAATCAGCATGAGCTGCAGGGGAAACCAGGATGGAATACGTCACTCAGACAGTTTGTTGGGAAAAGCCCAGAGAGCTGAGGAAATTGCAGGAACATCAGTGCTTGGCAGATTCATTACAGGTATCATCATTGGCACAGAAATCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278351 False 2271 lncRNA 0.43 2 23781746 23784079
TU278352 True 2690 lncRNA 0.46 4 23781746 23786017
TU278353 False 1202 lncRNA 0.37 2 23781746 23819348

Neighbor

gene id symbol gene type direction distance location
tfb1m tfb1m coding upstream 5788 23751256 ~ 23775958 (+)
LOC120548746 NA coding upstream 211904 23553636 ~ 23569842 (+)
LOC120549876 NA coding upstream 253260 23517852 ~ 23528486 (+)
LOC120549681 LOC103375071,LOC100696357,LOC104924638,LOC102794258 coding upstream 826047 22951191 ~ 22955699 (+)
LOC120549680 NA coding upstream 862481 22913711 ~ 22919265 (+)
mocs3 mocs3,LOC103136035 coding downstream 146913 23966261 ~ 23973551 (+)
prkd3 LOC103353740 coding downstream 154879 23974227 ~ 24012289 (+)
foxa2 foxa2 coding downstream 203355 24022703 ~ 24024946 (+)
nkx2.2a nkx2-2,LOC100709604,LOC103458615,LOC103136030,LOC103390882,LOC101157822,LOC102307404,LOC107392558,LOC103359019 coding downstream 351499 24170847 ~ 24186610 (+)
nkx2.4a LOC102798947,LOC102306385,LOC100709876,LOC101467433 coding downstream 376818 24196166 ~ 24199536 (+)
G205477 NA non-coding upstream 288524 23492983 ~ 23493222 (+)
G205464 NA non-coding upstream 434805 23344727 ~ 23346941 (+)
G205463 NA non-coding upstream 437080 23344280 ~ 23344666 (+)
G205461 cln8,LOC102794823 non-coding upstream 440007 23340579 ~ 23341739 (+)
G205359 NA non-coding upstream 778130 22979086 ~ 23003616 (+)
G205584 NA non-coding downstream 143948 23963296 ~ 23965840 (+)
LOC120548718 NA non-coding downstream 207586 24026934 ~ 24042477 (+)
G205592 NA non-coding downstream 223224 24042572 ~ 24042911 (+)
G205630 NA non-coding downstream 337852 24157200 ~ 24157453 (+)
LOC120549384 NA non-coding downstream 488781 24308129 ~ 24316723 (+)
si:ch211-195o20.7 LOC102076813 other upstream 229164 23530908 ~ 23552582 (+)
G205294 NA other upstream 935338 22833987 ~ 22846408 (+)
srp14 srp14 other upstream 1252997 22525155 ~ 22528749 (+)
gchfr gchfr other upstream 1415846 22363664 ~ 22365900 (+)
LOC120549475 gpatch2l other upstream 2621460 21137212 ~ 21160286 (+)
ralgapa2 ralgapa2 other downstream 509765 24329113 ~ 24447362 (+)
mgst3b LOC106536548,LOC108237254,LOC107096417,LOC100690646 other downstream 934869 24754217 ~ 24759498 (+)
LOC120549173 LOC103365836,LOC101483368 other downstream 1277818 25097166 ~ 25149128 (+)
LOC120549233 LOC103365834,LOC101066181,LOC100705758,LOC102786033,LOC101484046 other downstream 1330103 25149451 ~ 25180207 (+)
LOC120549312 fbxo33,LOC102800092 other downstream 2996127 26815475 ~ 26832435 (+)

Expression


Co-expression Network