LOC120549209


Basic Information

Item Value
gene id LOC120549209
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 704220 ~ 718323 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637350.1
TGGGATTTAAGCCCTTGGGGGAGAGAGGAATTTCTGTCAACCCCCGGTTCAGAGAATGAACAGACATCTGCTGTCCTCGGGTGCATGAAGCACTGCCACAGAGTACAGCAGGAGCAGAGCAGCCCAGCAGAGCGGAGCACACAATCTGGGGACAGGCTGAAACCTAAAGGTAGCACGGCTCTCATTCGGTGAAGGCTTTAAACAAGCATCCTGGCTCACCCGTGCTGGAGGCTACGATGGTCACCTCTTTATCATTGACACCGTCACACTTCACTTCAGGAGGAGCTCACGCTGATCACGGATATCTTGTCCCGGGATCGCAGCAGCGTAGTGTTCCGGCTGCTCTCTCTCCACATTCCGGAGTAGCTCACGCTGATCGCGGATATCCTGTCCCCGGATGAAAAGCCTCTGTCGTCGGATGCGCAGCCCCTCTCGTCGGATGCACAGCCCCTGAGAGTGTGTTCAGCCACAGACAAATCCGAAATGTTCAACACGAGCTAGACACTGTACCCTCAATATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637350.1 True 520 lncRNA 0.55 3 704220 718323

Neighbor

gene id symbol gene type direction distance location
LOC120549204 LOC104922054 coding upstream 46147 656330 ~ 658073 (+)
trnav-aac_28 NA coding upstream 233498 470650 ~ 470722 (+)
LOC120549579 NA coding upstream 276685 425361 ~ 427535 (+)
LOC120550040 NA coding upstream 438260 265798 ~ 265960 (+)
LOC120550039 NA coding upstream 438894 265165 ~ 265326 (+)
LOC120548863 LOC107574244 coding downstream 278298 996621 ~ 1001424 (+)
LOC120550151 NA coding downstream 691701 1410024 ~ 1410142 (+)
LOC120550347 NA coding downstream 691925 1410248 ~ 1410366 (+)
LOC120550237 NA coding downstream 692370 1410693 ~ 1410810 (+)
LOC120550358 NA coding downstream 692592 1410915 ~ 1411033 (+)
G199251 NA non-coding upstream 57302 646671 ~ 646918 (+)
G199236 NA non-coding upstream 110836 593182 ~ 593384 (+)
LOC120549205 NA non-coding upstream 226656 474987 ~ 477564 (+)
LOC120549206 NA non-coding upstream 229928 471854 ~ 474292 (+)
G199211 NA non-coding upstream 254054 449907 ~ 450166 (+)
G199265 NA non-coding downstream 88528 806851 ~ 808359 (+)
G199276 NA non-coding downstream 123818 842141 ~ 842444 (+)
G199294 NA non-coding downstream 179085 897408 ~ 897838 (+)
G199297 NA non-coding downstream 231449 949772 ~ 950124 (+)
G199303 NA non-coding downstream 240620 958943 ~ 959320 (+)
LOC120549207 NA other upstream 653334 27895 ~ 50886 (+)
G199306 NA other downstream 244786 963109 ~ 992012 (+)
LOC120549526 NA other downstream 381261 1099584 ~ 1101404 (+)
G199564 NA other downstream 1440567 2158890 ~ 2159383 (+)
G199652 NA other downstream 1829662 2547985 ~ 2548539 (+)
G199689 NA other downstream 1974150 2692473 ~ 2693453 (+)

Expression


Co-expression Network