LOC120551213


Basic Information

Item Value
gene id LOC120551213
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 9974695 ~ 9995625 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039788463.1
TGCTCATTAACTGTTCAGACCTCTTAGAGTCATGATGCTTGCAGGTTTCATCTTTCTGCTCCTCGTCACAGGTGGAAGTACCTCCAATTACACAGAGCAACCAGAGCTTCCTGGCAATCAACAGATGTTCAATTACAGCTTTGAGGAAAGTGGAAGTACCTCCAATTACACTGCAACATTACAACCAGAGCTTCAAGAAAACTCCAATCAGAGCCTTAAGAACGTGAGTGGGGAGTCCTCCAAGGGTAACTGTACTTATCGGGATATTTTAAGGCATTTGAACTTAAAAGAAGGAAATGAGAACTCCATGACTCAGCCTGGTGGTGATAAATCACCCACAACAGTTTATCTGGAACTACTACTCTATGCCATTCTAGATGTGaatGAGAAGGACCAGAAATTTGTTTCTTACATTTGGATTGATATGTATTGGAAGGATGACAACATTTCTTGGAATCCAGATGAATTCTGTGGTATAAAGGAAATTCATCTTCCTGCTGAAAAAGTGTGGAAGCCAGATCTAACTATTGAAGAGATGACAGAAAAGGACAAGGCCCTTCCAAGTCCATATCTCGTCATTATGTCGGAAGGTGTGATCATTCGCAGGGATGACATGTTGGTGATCAGCACCTGCACGATGGAAGTTTACAGATTTCCCTTTGACTTTCAGAGCTGTACCCTCTCTTTAAAGTCTATCATACACTCTGACAGGTATATAAAGCTTGAAGCGGGAGCTGAATCTGAATTGACCACAATGTGGTCTAAGGAGATGATGCGGACCCAGTCCGAGTGGTTGTTTATCAACATGACAATCAACCACAAAACTGTCAACAATTTTGGTTTAAACCAAAGCATGTTGATTTACACTATCAACATGAAGAGGCGGTCTGCACTTTACGTGGTTAACTTCTTGGCCCCCATCATGTTCTTCTTTTGTCTGGACTTGGCCTCATTCCTGATCTCGGACAGCGGAGGAGAGAAGCTCAGCTTCAAGGTCACTGTGCTGCTTGCTGTCACTGTGATGCAGCTTATTCTCAATGAGATTCTGCCTTCCTCGTCAGACAGGATTCCTCTTATAGCGGTCTACTGCATTGGGATGTTTGGATTGATGCTGCTAAGCCTAATGGAGACGATTTTGGTGATGCATCTAATGGAAAAAGACTCTAAAGACCAAAGCCTGAGTGAGGACTGTGGGGACAAACAGGGCAAAGTCAGCTTCCGCAACTGTTGTAGAGATGTTAAGAAATTGACTCACGTCTGTCACATCTGTGATGTGTTTCCTGGTGAAACGCCATCTGGAATGCTGCCGGTGGCCAAAGAGGGTAGCAGCCTGACGGAGGAGTCCCATGCCTCAGATGAGCTAAGTGAGGCGGTGAAAGCTCTGACTCTGCTCCTTAGCaacagggaggaagagaggatgCCCGGCTACTGGACCAGAGTGACTAAAACAATCAACAaaattttcttcattttctatGTCATAGCTGCCTTTGTGTTTTTactctgtttgtttttcatttggaAAGAAAACAGGTGATAATAATTCAGATGATTGAAAACAAGTCATTCTGCAGGTTCATTTGGGCTAGAGGTGAAGCTGTGCTGAAATAAAGTCTCTGCCCCCAATTTTGGTGTCACTAACCACAACCTTCTTCTGCATGAGCCAAGCTAATGATCAAAGGTGTACTTGGCTGTTCAGGTAGTATTCAATCCTTCAGTGGTATTGCAGCTGCCATTTGCATGTTTCACACACAGTGGTTCATATCAAACACACATGTTGTCTTGTCATATTCTAATACACTAATCTGCAATCAATGGGTAGATTTATGTCTTTGCTATGTAATAAAATATACACTTTTAGTTATCAAGCATGCAGGTCAAAATTACATGTTTTCCTAATCTTTATATGGGCAATTCTTATAATCCACCCCAAAACATTAAAGTGTGTACAATTCTAAATATGCAATCAAGTGCATGGAATTTCATATCATACATGTTCTCACAGCTTTGTTTTGTTCCTGCAGGATTCCTATCTAAGCTCTTTTCATAAAATTACATTCCTTTTAACCATTGCGCTAACATGACTAAAACAAATATCCAAAAATCGATGCAGCAGGTCCCATAGTTTGTAACGCATgctttcttttaaaaatgtgtagtAATTTGACTTGGCTTCTCCAGAGCAAAAGAAGTCAATGTACAACATTTTCTCTTCAGAACCGGTATAGAAAGCACATATCAGGACTGTTCCATTATGAATACATGAAGCAGAGTAATGCAGCTGTGTAAGAACACCACAGAACGAACACAATAATACCTGATAGAATAACTGTAAAACACATTAATTTCAGAATATTATAGATGTGTTTCAGAATGTTAAAGAAACAATAGACCAGTTTTAAATCTACACTACACAACACTACGTAGCTTTATAGCTATCAGACTCTGTAATAAACAATAACAACTAAAACAa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039788463.1 True 2473 mRNA 0.40 13 9974695 9995625

Neighbor

gene id symbol gene type direction distance location
lrrc59 lrrc59 coding downstream 17435 9948870 ~ 9957260 (-)
LOC120551164 NA coding downstream 57213 9913442 ~ 9917482 (-)
zgc:112285 LOC103376614,LOC107387710,LOC108246171,LOC104946523,LOC105926466 coding downstream 62902 9907938 ~ 9911793 (-)
bicral gltscr1l coding downstream 107080 9858082 ~ 9867615 (-)
LOC120551544 rgs9,LOC102212303,LOC102795660 coding downstream 136503 9826898 ~ 9838192 (-)
LOC120551212 NA coding upstream 2239 9997864 ~ 10007609 (-)
LOC120551215 NA coding upstream 25766 10021391 ~ 10028848 (-)
LOC120551218 LOC100709573 coding upstream 46384 10042009 ~ 10051395 (-)
rnf157 rnf157 coding upstream 57623 10053248 ~ 10076987 (-)
LOC120551225 LOC102301022,LOC102200806,LOC102204770,LOC101474318 coding upstream 98269 10093894 ~ 10108329 (-)
G211203 NA non-coding downstream 52548 9921884 ~ 9922147 (-)
G211125 NA non-coding downstream 56082 9918410 ~ 9918613 (-)
G211112 tbcc,LOC102796566 non-coding downstream 73911 9868662 ~ 9900784 (-)
G211117 NA non-coding downstream 93166 9879403 ~ 9881529 (-)
G211063 NA non-coding downstream 269761 9703546 ~ 9704934 (-)
G211219 NA non-coding upstream 13065 10008690 ~ 10008932 (-)
G211213 NA non-coding upstream 18273 10013898 ~ 10080626 (-)
LOC120551239 NA non-coding upstream 86252 10081877 ~ 10082734 (-)
G211225 NA non-coding upstream 87922 10083547 ~ 10083816 (-)
G211214 NA non-coding upstream 88950 10084575 ~ 10090067 (-)
G211113 LOC104923420 other downstream 80282 9887314 ~ 9894413 (-)
G210928 LOC104945051 other downstream 1381631 8589241 ~ 8593064 (-)
LOC120551255 LOC101163528,LOC105932510,LOC103361451,LOC101061764,LOC102786967 other downstream 1689964 8282838 ~ 8284731 (-)
G210761 NA other downstream 1912445 8059323 ~ 8062250 (-)
LOC120551330 LOC102192764 other downstream 2179217 7722897 ~ 7795478 (-)
LOC120551227 NA other upstream 174089 10169714 ~ 10172003 (-)
G211451 LOC104933891,LOC103372658,LOC104967452 other upstream 331042 10326667 ~ 10329408 (-)
sec24c NA other upstream 504628 10500253 ~ 10561402 (-)
prkcea prkce,LOC103370414 other upstream 759427 10755052 ~ 10806087 (-)
mta3 mta3 other upstream 862774 10858399 ~ 10891991 (-)

Expression


Co-expression Network