LOC120551222


Basic Information

Item Value
gene id LOC120551222
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 10114391 ~ 10128026 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039788479.1
TCTACACTTGGCGCTATGGTTGAGACTCCCATACCCGTCCTCTCCAAAACCTCCTTCACGAAGCTTCCTCACTGGGATTTTGAGGATGTTTATAACCAGGATGTTCCACCCAGGCAGACAACATGTGCCCAGTCTCTGCGAAACACTGAGGTTGAGAGCTTCAAGAAGGCTTTCCTCCCCAACATACGTTTGTTTCTGCACAAAGACAGTATCAACATGAGCGAGTGGAATCGGCTTTCACATTTTAACAATCCTTTTGGTTTTATGGAGTACAAGTATGATGATGTGATGGCTTCAGTAAAGTTGATCCCAAAGCCAaaagagccactgctccttccAAAAGCAGGTGGTGATGGGTGTGTGCGCTGTGCTGTGGTGGGCAATGCAGGGATCCTCAATGGCTCTAAAATGGGGAAAGAGATTGATGCTCATGATTACGTTTTTCGGATGAATGGTGCAATCACCAAAGGTTACGAGGAAGACGTAGGAAACAGAACATCGGTGTACATTCACACGGCCCACTCCATCACATCTGCGCTGTATTTCTTCAAGAAGTTTGGATATACTAATGTCCCTCATGATGAGGGTATAAAATACGTGATGGTTCCTGAGGGGATGAGGGATTTCAATTGGCTCGAGGGACTTCTCAAAGGAGAAAGAATCACTGCTGACCTATATGAAAACATAAGGCCATGGACGTACTATGCTGGGCAGTACAATGAGACCCGCTTCTATGTTCTGCACCAGGACTTCCTCAGATACATTCGAAACAGGTTCTTAAAGTCTCCTAATCTAAATGCTTCATACTGGGCAATAGTCAGACCAAGCAATGGGGCATTCACTCTCTTCCTGGCTCTGCATACCTGCGACACTGTGAATGCATATGGATTCATGACTGAGGACTACAAGAAATACTCAACTTACTACTTtgagaaaaatattaaaacccCTGTCATTCTCTACGCCAACCATGACTATATCCTGGAGAAAAACATGTGGAAAAAACTGCATGACAGCAAAATAattaagctttatcaaagaacAGAGTCAGAAACAGGGACGAAAAAGCCAAAACAACACTGAAACACTGAGAATGGAAGTAATGGCATCAAGAATGTAggtcattttgttttaaattcaggAGGAATGCAGTTCAGGAgaaaatattgcactttttaccTCACTATCTTTTTACTTACTTATTGTGATTTATCATGCAAATATCAGCTTTTAAAATATGCATTGTTACAGATTAAACTATGAAACAAGATATGAAGTAGTTCAAACTAACCCTATCTCGACCATCTACATAATTTAAATGCTGCTTACATGTtaatgacacatacacacacacacacatgcacacacacacgtgcacccacgcgcacacgcatgcacgatttatatatataaaatcaagTCATATTTTAATAGTACCTCAGGTAAATTTTTAAATCTGACAATATTTCAATACTGTGACTGAAGTAAGATTTAAAATGTGACATAACGTCACaatgattacagttttttttacaatcactttgctactaatttcacaaccttgatgtcatttttcaaaactctagacacaaaactcaaaacggtcatcacttgta
>XM_039788480.1
ttgtactttttcttttatcatgGGGCCAATCATCAAGCAGCATCAGATGTGATGGCTTCAGTAAAGTTGATCCCAAAGCCAaaagagccactgctccttccAAAAGCAGGTGGTGATGGGTGTGTGCGCTGTGCTGTGGTGGGCAATGCAGGGATCCTCAATGGCTCTAAAATGGGGAAAGAGATTGATGCTCATGATTACGTTTTTCGGATGAATGGTGCAATCACCAAAGGTTACGAGGAAGACGTAGGAAACAGAACATCGGTGTACATTCACACGGCCCACTCCATCACATCTGCGCTGTATTTCTTCAAGAAGTTTGGATATACTAATGTCCCTCATGATGAGGGTATAAAATACGTGATGGTTCCTGAGGGGATGAGGGATTTCAATTGGCTCGAGGGACTTCTCAAAGGAGAAAGAATCACTGCTGACCTATATGAAAACATAAGGCCATGGACGTACTATGCTGGGCAGTACAATGAGACCCGCTTCTATGTTCTGCACCAGGACTTCCTCAGATACATTCGAAACAGGTTCTTAAAGTCTCCTAATCTAAATGCTTCATACTGGGCAATAGTCAGACCAAGCAATGGGGCATTCACTCTCTTCCTGGCTCTGCATACCTGCGACACTGTGAATGCATATGGATTCATGACTGAGGACTACAAGAAATACTCAACTTACTACTTtgagaaaaatattaaaacccCTGTCATTCTCTACGCCAACCATGACTATATCCTGGAGAAAAACATGTGGAAAAAACTGCATGACAGCAAAATAattaagctttatcaaagaacAGAGTCAGAAACAGGGACGAAAAAGCCAAAACAACACTGAAACACTGAGAATGGAAGTAATGGCATCAAGAATGTAggtcattttgttttaaattcaggAGGAATGCAGTTCAGGAgaaaatattgcactttttaccTCACTATCTTTTTACTTACTTATTGTGATTTATCATGCAAATATCAGCTTTTAAAATATGCATTGTTACAGATTAAACTATGAAACAAGATATGAAGTAGTTCAAACTAACCCTATCTCGACCATCTACATAATTTAAATGCTGCTTACATGTtaatgacacatacacacacacacacatgcacacacacacgtgcacccacgcgcacacgcatgcacgatttatatatataaaatcaagTCATATTTTAATAGTACCTCAGGTAAATTTTTAAATCTGACAATATTTCAATACTGTGACTGAAGTAAGATTTAAAATGTGACATAACGTCACaatgattacagttttttttacaatcactttgctactaatttcacaaccttgatgtcatttttcaaaactctagacacaaaactcaaaacggtcatcacttgta

Function

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0097503 sialylation biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008373 sialyltransferase activity molecular_function

KEGG:

id description
K03479 SIAT7A, ST6GalNAc I; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7A)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039788479.1 True 1616 mRNA 0.40 8 10114391 10127656
XM_039788480.1 False 1379 mRNA 0.39 7 10114391 10128026

Neighbor

gene id symbol gene type direction distance location
LOC120551225 LOC102301022,LOC102200806,LOC102204770,LOC101474318 coding downstream 6062 10093894 ~ 10108329 (-)
rnf157 rnf157 coding downstream 37404 10053248 ~ 10076987 (-)
LOC120551218 LOC100709573 coding downstream 62996 10042009 ~ 10051395 (-)
LOC120551215 NA coding downstream 85543 10021391 ~ 10028848 (-)
LOC120551212 NA coding downstream 106782 9997864 ~ 10007609 (-)
LOC120551219 LOC102301022,LOC101475163,LOC102200806 coding upstream 48944 10176970 ~ 10210251 (-)
arl3b arl3,LOC103367836,LOC102778022,LOC102201386,LOC103145158 coding upstream 112396 10240422 ~ 10243479 (-)
LOC120551235 pgs1 coding upstream 172337 10300363 ~ 10322684 (-)
trnal-uag_19 NA coding upstream 214491 10342517 ~ 10342598 (-)
LOC120551217 cdr2,LOC102780218 coding upstream 257351 10385377 ~ 10394268 (-)
G211214 NA non-coding downstream 24324 10084575 ~ 10090067 (-)
G211225 NA non-coding downstream 30575 10083547 ~ 10083816 (-)
LOC120551239 NA non-coding downstream 31657 10081877 ~ 10082734 (-)
G211213 NA non-coding downstream 33765 10013898 ~ 10080626 (-)
G211219 NA non-coding downstream 105459 10008690 ~ 10008932 (-)
G211229 NA non-coding upstream 12567 10140593 ~ 10141696 (-)
G211235 NA non-coding upstream 35359 10163385 ~ 10163665 (-)
LOC120551240 NA non-coding upstream 82506 10210532 ~ 10217704 (-)
G211440 NA non-coding upstream 130116 10258142 ~ 10361903 (-)
G211464 polr3e non-coding upstream 239595 10367621 ~ 10368221 (-)
G211113 LOC104923420 other downstream 219978 9887314 ~ 9894413 (-)
G210928 LOC104945051 other downstream 1521327 8589241 ~ 8593064 (-)
LOC120551255 LOC101163528,LOC105932510,LOC103361451,LOC101061764,LOC102786967 other downstream 1829660 8282838 ~ 8284731 (-)
G210761 NA other downstream 2052141 8059323 ~ 8062250 (-)
LOC120551330 LOC102192764 other downstream 2318913 7722897 ~ 7795478 (-)
LOC120551227 NA other upstream 41688 10169714 ~ 10172003 (-)
G211451 LOC104933891,LOC103372658,LOC104967452 other upstream 198641 10326667 ~ 10329408 (-)
sec24c NA other upstream 372227 10500253 ~ 10561402 (-)
prkcea prkce,LOC103370414 other upstream 627026 10755052 ~ 10806087 (-)
mta3 mta3 other upstream 730373 10858399 ~ 10891991 (-)

Expression


Co-expression Network