G229381



Basic Information


Item Value
gene id G229381
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 21619973 ~ 21620222 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU311175
gccactttcctaaagccaaacggcgtgttatctgtacgcattttgtgctatccacgtgtatgtctacgctgtatacagcggatgtaaacatacacaccacgtggcgtcgccacatgttgaaaaacaacacacacggacgcaatcccagctctcctgggtgaaagtcctgtgtcttACCCATctgccaccccaaccaacctttCTCCCTCCCCTACTGTggacttacgtcctttcatactactcactacgg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU311175 True 250 lncRNA 0.50 1 21619973 21620222

Neighbor


gene id symbol gene type direction distance location
trnal-caa_47 NA coding upstream 23095 21596768 ~ 21596878 (+)
trnal-caa_46 NA coding upstream 23837 21596026 ~ 21596136 (+)
trnal-caa_45 NA coding upstream 25549 21594314 ~ 21594424 (+)
trnal-caa_44 NA coding upstream 26089 21593774 ~ 21593884 (+)
trnal-caa_43 NA coding upstream 26435 21593428 ~ 21593538 (+)
LOC120553001 NA coding downstream 4280 21624502 ~ 21630444 (+)
LOC120553089 NA coding downstream 137431 21757653 ~ 21766517 (+)
LOC120553088 NA coding downstream 146685 21766907 ~ 21801672 (+)
LOC120553094 NA coding downstream 250361 21870583 ~ 21877270 (+)
LOC120553802 LOC104922677 coding downstream 258056 21878278 ~ 21890573 (+)
G229352 NA non-coding upstream 6744 21503644 ~ 21613229 (+)
G229264 NA non-coding upstream 348862 21265412 ~ 21271111 (+)
G229263 NA non-coding upstream 355274 21264396 ~ 21264699 (+)
G229233 NA non-coding upstream 399161 21220448 ~ 21220812 (+)
G229205 NA non-coding upstream 557538 21037948 ~ 21062435 (+)
G229386 NA non-coding downstream 16875 21637097 ~ 21637359 (+)
G229395 NA non-coding downstream 45976 21666198 ~ 21666434 (+)
G229396 NA non-coding downstream 47491 21667713 ~ 21667988 (+)
G229399 NA non-coding downstream 62397 21682619 ~ 21683484 (+)
G229432 NA non-coding downstream 147131 21767353 ~ 21768029 (+)
arid2 arid2 other upstream 190735 21376872 ~ 21429238 (+)
LOC120553023 LOC106946322,LOC103151516,LOC104922640 other upstream 469622 21148267 ~ 21150351 (+)
ucmaa NA other upstream 1228567 20382393 ~ 20391406 (+)
LOC120553418 NA other upstream 1394788 20190928 ~ 20225185 (+)
LOC120553749 NA other upstream 1446566 20147078 ~ 20173407 (+)
G229423 NA other downstream 217700 21837922 ~ 21847020 (+)
G229425 NA other downstream 228989 21849211 ~ 21850601 (+)
G229422 NA other downstream 237761 21857983 ~ 21859209 (+)
G229428 NA other downstream 246979 21867201 ~ 21868297 (+)
phlda1 phlda1 other downstream 1119495 22739717 ~ 22743179 (+)

Expression



Co-expression Network