cdnf (LOC104964768)


Basic Information

Item Value
gene id cdnf
gene name LOC104964768
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 25568539 ~ 25574022 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791989.1
gctattgaagggcgggtcttggcgtggccatagtaggattggTAAATACATACGCGGCTGGGACACCATGTAGCTAATAATAACGCCAAACGCTGTCATGTCGGTGTTGTCCCTCGCCATTCTGCTGCTGGTCAGAGGGTTTACCTTTTCTGCGGCAGGCAACTGTGAAGtgtgtgtggacTTTCTCTACAGATTGTATGGCAGTCTGACGTCAGCCCACAGTGAGCTCACTTCTTCCCTGGTGGAGGAAGAGCTGATCCAGGCCTGCGCTGTCGCCCAGGGGAAGGAAGCGAGGCTGTGTTACTACCTGGGAGCCAGTAGTGACGCAGCGACCCGCGTCACAGCATCAGTGTCTCGACCCCTGGCCTCCCATGTCCCCGTTGAGAAGATCTGCCAGCGCCTCAGCAGCAGAGACACGCAGATCTGTCAGCTCAGATATGAGCCTCAGCCGAAGGATCTGAGCAGCGACGGGCTGAAAAAGCTGAGAGTCTTGGAGCTGAGGAACATTCTAGCCTCGTGGGGTGAAGAGTGTCGAGGCTGTCTGGAGAAACACGAGTTTGTCAGCCTCATCCAGGAGAAAGCACCGCTGCATGCTCACAGTACGGAACTTTGAACTAGTAACTTCTGCCCCTTCTCATCCCCACTGCAAAAAAGTCAATTTTCTCTCACTCCATTTTCAAGAATATGCACACTGCAATCACTACACTGCACTGTTCCATACCGCCACTCACAAGAAACATCGGTTTGTTCGCTGGTACAAGTGTTTTCCAAGCTGAAGGTAGTTGTACGTCCTGGGGAAAACATTTTTCTCCAAATTGGCAGTAGAGTTCTGAAATGTAGTTTACATCCAGCTGCTACCATTTCCTTTGAGCCACATTATGCAGCCTGACAGACGACATGGTGGGAAAAATAATCATTTGAATGCATGATTTACTAACTCATGCTCCCACGTGACTTAACTTGTATCTATTTGTGCTAATGTGTACCTGACTGATAGCAGCCACACCGATAGCAGCATTAATGCTTTTGTCTATAGAATGTCATCAAATAGTCAAAATGaccattaaaggtgcagtagataagacttctaaaactaactttctgtcatattagctgaaactgaccctatgttccagtagaactacatgaagc

Function

NR:

description
PREDICTED: mesencephalic astrocyte-derived neurotrophic factor-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791989.1 True 1152 mRNA 0.48 4 25568539 25574022

Neighbor

gene id symbol gene type direction distance location
prl2 LOC104964766,LOC103356682,LOC100697904 coding upstream 15538 25546940 ~ 25553001 (+)
LOC120553524 dennd5b,LOC102198357 coding upstream 76807 25402355 ~ 25491732 (+)
LOC120553526 NA coding upstream 168332 25392432 ~ 25400207 (+)
ttll12 ttll12 coding upstream 219198 25263996 ~ 25349341 (+)
LOC120553672 LOC103361951,LOC100711848,LOC101487241 coding upstream 308189 25244537 ~ 25260350 (+)
tmbim4 tmbim4 coding downstream 34484 25608506 ~ 25614445 (+)
lemd3 lemd3,LOC104964688,LOC106576661 coding downstream 47421 25621443 ~ 25640090 (+)
hmga2 hmga2 coding downstream 121859 25695881 ~ 25753815 (+)
dera dera coding downstream 194715 25768737 ~ 25779615 (+)
il17ra1a NA coding downstream 571885 26145907 ~ 26158913 (+)
G230339 NA non-coding upstream 64103 25503664 ~ 25504436 (+)
G230337 NA non-coding upstream 68330 25499847 ~ 25500209 (+)
G230336 NA non-coding upstream 73140 25495148 ~ 25495399 (+)
G230327 NA non-coding upstream 74184 25436151 ~ 25494355 (+)
G230259 NA non-coding upstream 190938 25376347 ~ 25377601 (+)
G230401 NA non-coding downstream 21570 25595592 ~ 25616671 (+)
G230404 NA non-coding downstream 44180 25618202 ~ 25619259 (+)
G230406 NA non-coding downstream 76636 25650658 ~ 25952405 (+)
G230415 NA non-coding downstream 147631 25721653 ~ 25722486 (+)
G230417 NA non-coding downstream 202989 25777011 ~ 25777634 (+)
LOC120553523 NA other upstream 194543 25362882 ~ 25373996 (+)
G230148 LOC102781993,LOC101465723 other upstream 790281 24620812 ~ 24778258 (+)
LOC120553083 NA other upstream 1253832 24309542 ~ 24314707 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 1622899 23934300 ~ 23945640 (+)
adm2a NA other upstream 1719915 23833018 ~ 23848624 (+)
msrb3 msrb3 other downstream 67818 25641840 ~ 25662819 (+)
LOC120553706 NA other downstream 236385 25810407 ~ 25812828 (+)
arhgef39 arhgef39 other downstream 464166 26038188 ~ 26106823 (+)
mrps33 mrps33,LOC106591474 other downstream 798692 26372714 ~ 26381109 (+)
LOC120553759 NA other downstream 1119334 26693356 ~ 26971853 (+)

Expression


Co-expression Network