G35494


Basic Information

Item Value
gene id G35494
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 2643029 ~ 2648784 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47500
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgggtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgttatgtgtgtgtctgtgtgtgtgtttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcc
>TU47502
tgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgttttgtctgtgtgtgtctctgtgtctctgtgtgtttgtctgtgtgtcgttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgagtgtgtgtttctgtgtgtgtgt
>TU47503
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgggtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgttttgtctgtgtgtgtctctgtgtctctgtgtgtttgtctgtgtgtcgttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgttatgtgtgtgtctgtgtgtgtgtttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcc
>TU47504
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgggtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgttttgtctgtgtgtgtctctgtgtctctgtgtgtttgtctgtgtgtcgttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgagtgtgtgtttctgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47500 False 296 lncRNA 0.49 3 2643029 2648784
TU47502 False 288 lncRNA 0.49 2 2643354 2643703
TU47503 True 395 lncRNA 0.49 3 2643029 2648784
TU47504 False 301 lncRNA 0.49 2 2643354 2648784

Neighbor

gene id symbol gene type direction distance location
pck1 pck1 coding downstream 773192 1856113 ~ 1869837 (-)
LOC120556728 NA coding downstream 958726 1677230 ~ 1684303 (-)
ccndbp1 ccndbp1 coding downstream 967511 1658255 ~ 1675518 (-)
klhdc8a klhdc8a,LOC100707086 coding downstream 1109472 1469573 ~ 1533557 (-)
slc41a1 slc41a1,LOC102789620,LOC102314684 coding downstream 1194125 1415000 ~ 1448904 (-)
LOC120557394 NA coding upstream 116482 2765266 ~ 2774469 (-)
LOC120557399 NA coding upstream 129669 2778453 ~ 2786738 (-)
LOC120557398 NA coding upstream 138953 2787737 ~ 2855825 (-)
LOC120556710 NA coding upstream 310097 2958881 ~ 2961321 (-)
mfsd4aa LOC102790596,LOC101468110,LOC102311398 coding upstream 444942 3093726 ~ 3112506 (-)
G35481 NA non-coding downstream 34361 2577610 ~ 2608668 (-)
G35480 NA non-coding downstream 60667 2578432 ~ 2582362 (-)
G35478 NA non-coding downstream 147348 2489285 ~ 2495681 (-)
G35471 NA non-coding downstream 209146 2431667 ~ 2433883 (-)
G35470 NA non-coding downstream 236231 2404245 ~ 2406798 (-)
G35521 NA non-coding upstream 57111 2705895 ~ 2706887 (-)
G35523 NA non-coding upstream 60700 2709484 ~ 2726817 (-)
G35528 NA non-coding upstream 71584 2720368 ~ 2721281 (-)
G35530 flnb,LOC102792624 non-coding upstream 79275 2728059 ~ 2731334 (-)
G35537 NA non-coding upstream 93686 2742470 ~ 2742806 (-)
raly raly other downstream 323005 2098759 ~ 2320024 (-)
snrpe ruxe,snrpe other downstream 1394111 1244017 ~ 1248918 (-)
G35168 NA other downstream 1620905 1021626 ~ 1022124 (-)
G35113 NA other downstream 1809266 706097 ~ 833763 (-)
LOC120558119 LOC104943678 other downstream 2014736 579928 ~ 628293 (-)
c1qb NA other upstream 100628 2749412 ~ 2756616 (-)
tma7 NA other upstream 210193 2858977 ~ 2863523 (-)
G35645 NA other upstream 233097 2881881 ~ 2884181 (-)
G35647 LOC104965637,LOC100711663,LOC107385065,LOC102300449 other upstream 239208 2887992 ~ 2953107 (-)
cdk18 cdk18,LOC101468598,LOC102310375 other upstream 466455 3115239 ~ 3206763 (-)

Expression


Co-expression Network